Gene Gene information from NCBI Gene database.
Entrez ID 6348
Gene name C-C motif chemokine ligand 3
Gene symbol CCL3
Synonyms (NCBI Gene)
G0S19-1LD78LD78ALPHAMIP-1-alphaMIP1ASCISCYA3
Chromosome 17
Chromosome location 17q12
Summary This locus represents a small inducible cytokine. The encoded protein, also known as macrophage inflammatory protein 1 alpha, plays a role in inflammatory responses through binding to the receptors CCR1, CCR4 and CCR5. Polymorphisms at this locus may be a
miRNA miRNA information provided by mirtarbase database.
4
miRTarBase ID miRNA Experiments Reference
MIRT438283 hsa-miR-223-3p Luciferase reporter assay 24084739
MIRT438283 hsa-miR-223-3p Luciferase reporter assay 24084739
MIRT736396 hsa-miR-369-3p qRT-PCRFlow cytometry 33679688
MIRT756279 hsa-miR-877-3p qRT-PCRELISA 34768991
Transcription factors Transcription factors information provided by TRRUST V2 database.
7
Transcription factor Regulation Reference
E2F1 Unknown 17707233
NFKB1 Activation 16982926
NFKB1 Unknown 11342414;17707233
RELA Activation 16982926
RELA Unknown 11342414;17707233
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
79
GO ID Ontology Definition Evidence Reference
GO:0000165 Process MAPK cascade IEP 12032188
GO:0001649 Process Osteoblast differentiation IEP 21403648
GO:0001775 Process Cell activation IDA 10706735
GO:0002548 Process Monocyte chemotaxis IC 10660125
GO:0002548 Process Monocyte chemotaxis IDA 10706735
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
182283 10627 ENSG00000277632
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P10147
Protein name C-C motif chemokine 3 (G0/G1 switch regulatory protein 19-1) (Macrophage inflammatory protein 1-alpha) (MIP-1-alpha) (PAT 464.1) (SIS-beta) (Small-inducible cytokine A3) (Tonsillar lymphocyte LD78 alpha protein) [Cleaved into: MIP-1-alpha(4-69) (LD78-alph
Protein function Monokine with inflammatory and chemokinetic properties. Binds to CCR1, CCR4 and CCR5. One of the major HIV-suppressive factors produced by CD8+ T-cells. Recombinant MIP-1-alpha induces a dose-dependent inhibition of different strains of HIV-1, H
PDB 1B50 , 1B53 , 2X69 , 2X6G , 3FPU , 3H44 , 3KBX , 4RA8 , 4ZKB , 5COR , 5D65 , 7F1Q , 7F1T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00048 IL8 31 88 Small cytokines (intecrine/chemokine), interleukin-8 like Domain
Sequence
Sequence length 92
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
Viral protein interaction with cytokine and cytokine receptor
Chemokine signaling pathway
Toll-like receptor signaling pathway
Chagas disease
Human cytomegalovirus infection
Rheumatoid arthritis
Lipid and atherosclerosis
  Chemokine receptors bind chemokines
Interleukin-10 signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
11
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ATHEROSCLEROSIS CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN ISCHEMIA CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA, HEPATOCELLULAR CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COLONIC NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 30940905
★☆☆☆☆
Found in Text Mining only
Acute pancreatitis Pancreatitis BEFREE 30552706
★☆☆☆☆
Found in Text Mining only
Acute Undifferentiated Leukemia Leukemia BEFREE 30279500
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 8987092
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Of Esophagus Esophageal Cancer BEFREE 30834503
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 30940905
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 27632954
★☆☆☆☆
Found in Text Mining only
Adult T-Cell Lymphoma/Leukemia T-Cell Lymphoma/Leukemia BEFREE 21942940, 31592701
★☆☆☆☆
Found in Text Mining only
Aggressive Periodontitis Aggressive Periodontitis BEFREE 12608917
★☆☆☆☆
Found in Text Mining only
Alveolitis, Fibrosing Alveolitis CTD_human_DG 16324872, 17720292
★☆☆☆☆
Found in Text Mining only