Gene Gene information from NCBI Gene database.
Entrez ID 6307
Gene name Methylsterol monooxygenase 1
Gene symbol MSMO1
Synonyms (NCBI Gene)
DESP4ERG25MCCPDSC4MOL
Chromosome 4
Chromosome location 4q32.3
Summary Sterol-C4-mehtyl oxidase-like protein was isolated based on its similarity to the yeast ERG25 protein. It contains a set of putative metal binding motifs with similarity to that seen in a family of membrane desaturases-hydroxylases. The protein is localiz
SNPs SNP information provided by dbSNP.
3
SNP ID Visualize variation Clinical significance Consequence
rs760048191 A>C,G Pathogenic, likely-pathogenic Coding sequence variant, missense variant
rs869025576 T>A Pathogenic Coding sequence variant, missense variant
rs869025577 G>C Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
243
miRTarBase ID miRNA Experiments Reference
MIRT007120 hsa-miR-19a-3p Luciferase reporter assay 23451058
MIRT018951 hsa-miR-335-5p Microarray 18185580
MIRT030172 hsa-miR-26b-5p Microarray 19088304
MIRT051607 hsa-let-7e-5p CLASH 23622248
MIRT093443 hsa-miR-223-3p MicroarrayqRT-PCR 22815788
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
25
GO ID Ontology Definition Evidence Reference
GO:0000254 Function C-4 methylsterol oxidase activity IBA
GO:0000254 Function C-4 methylsterol oxidase activity IEA
GO:0000254 Function C-4 methylsterol oxidase activity TAS 8663358
GO:0005506 Function Iron ion binding IEA
GO:0005515 Function Protein binding IPI 32296183
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607545 10545 ENSG00000052802
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q15800
Protein name Methylsterol monooxygenase 1 (EC 1.14.18.9) (C-4 methylsterol oxidase) (Sterol-C4-methyl oxidase)
Protein function Catalyzes the three-step monooxygenation required for the demethylation of 4,4-dimethyl and 4alpha-methylsterols, which can be subsequently metabolized to cholesterol (PubMed:21285510, PubMed:23583456, PubMed:26114596, PubMed:28673550, PubMed:36
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04116 FA_hydroxylase 142 274 Fatty acid hydroxylase superfamily Family
Sequence
MATNESVSIFSSASLAVEYVDSLLPENPLQEPFKNAWNYMLNNYTKFQIATWGSLIVHEA
LYFLFCLPGFLFQFIPYMKKYKIQKDKPETWENQWKCFKVLLFNHFCIQLPLICGTYYFT
EYFNIPYDWERMPRWYFLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHHEFQAPF
GMEAEYAHPLETLILGTGFFIGIVLLCDHVILLWAWVTIRLLETIDVHSGYDIPLNPLNL
IPFYAGSRHHDFHHMNFIGNYASTFTWWDRIFGT
DSQYNAYNEKRKKFEKKTE
Sequence length 293
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Steroid biosynthesis
Metabolic pathways
  Cholesterol biosynthesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
8
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Microcephaly-congenital cataract-psoriasiform dermatitis syndrome Pathogenic; Likely pathogenic rs869025576, rs760048191, rs869025577 RCV000208581
RCV000208576
RCV000208578
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Cholangiocarcinoma Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Malignant lymphoma, large B-cell, diffuse Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MICROCEPHALY, CONGENITAL CATARACT, AND PSORIASIFORM DERMATITIS CTD, HPO
CTD, HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MICROCEPHALY, CONGENITAL CATARACT, PSORIASIFORM DERMATITIS SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Arthralgia Arthralgia Pubtator 21285510 Associate
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 27246191 Stimulate
★☆☆☆☆
Found in Text Mining only
Cataract Cataract Pubtator 21285510 Associate
★☆☆☆☆
Found in Text Mining only
Dermatologic disorders Dermatologic Disorders BEFREE 24144731
★☆☆☆☆
Found in Text Mining only
Developmental Disabilities Developmental disability Pubtator 21285510 Associate
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus, Non-Insulin-Dependent Diabetes Mellitus BEFREE 22791750, 30180967
★☆☆☆☆
Found in Text Mining only
Dwarfism Dwarfism HPO_DG
★☆☆☆☆
Found in Text Mining only
Dyslipidemias Dyslipidemias BEFREE 22791750
★☆☆☆☆
Found in Text Mining only
Dyslipidemias Dyslipidemias Pubtator 22791750 Associate
★☆☆☆☆
Found in Text Mining only
Familial Primary Pulmonary Hypertension Pulmonary hypertension Pubtator 34722766 Associate
★☆☆☆☆
Found in Text Mining only