Gene Gene information from NCBI Gene database.
Entrez ID 6259
Gene name Receptor like tyrosine kinase
Gene symbol RYK
Synonyms (NCBI Gene)
D3S3195JTK5JTK5ARYK1
Chromosome 3
Chromosome location 3q22.2
Summary The protein encoded by this gene is an atypical member of the family of growth factor receptor protein tyrosine kinases, differing from other members at a number of conserved residues in the activation and nucleotide binding domains. This gene product bel
miRNA miRNA information provided by mirtarbase database.
172
miRTarBase ID miRNA Experiments Reference
MIRT002602 hsa-miR-124-3p Microarray 15685193
MIRT002602 hsa-miR-124-3p Microarray;Other 15685193
MIRT025856 hsa-miR-7-5p Microarray 17612493
MIRT654069 hsa-miR-208a-5p HITS-CLIP 23824327
MIRT654068 hsa-miR-208b-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
72
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0004672 Function Protein kinase activity IEA
GO:0004713 Function Protein tyrosine kinase activity IDA 10454588
GO:0004714 Function Transmembrane receptor protein tyrosine kinase activity IBA
GO:0004888 Function Transmembrane signaling receptor activity IDA 10454588
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600524 10481 ENSG00000163785
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P34925
Protein name Tyrosine-protein kinase RYK (EC 2.7.10.1)
Protein function May be a coreceptor along with FZD8 of Wnt proteins, such as WNT1, WNT3, WNT3A and WNT5A. Involved in neuron differentiation, axon guidance, corpus callosum establishment and neurite outgrowth. In response to WNT3 stimulation, receptor C-termina
PDB 6TUA
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02019 WIF 66 194 WIF domain Family
PF07714 PK_Tyr_Ser-Thr 330 596 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Observed in all the tissues examined.
Sequence
Sequence length 607
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Wnt signaling pathway
Axon guidance
  TCF dependent signaling in response to WNT
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
21
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARDIOVASCULAR DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CLEFT PALATE CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute leukemia Leukemia BEFREE 26561210
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 33178184 Associate
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 36210461 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma, Ovarian Epithelial Ovarian Epithelial carcinoma BEFREE 8726462
★☆☆☆☆
Found in Text Mining only
Cleft Lip Cleft lip Pubtator 34684112 Associate
★☆☆☆☆
Found in Text Mining only
Epithelial ovarian cancer Ovarian cancer BEFREE 8726462
★☆☆☆☆
Found in Text Mining only
Familial medullary thyroid carcinoma Medullary thyroid carcinoma BEFREE 8755580
★☆☆☆☆
Found in Text Mining only
Glioblastoma Glioblastoma Pubtator 28086236 Stimulate
★☆☆☆☆
Found in Text Mining only
Glioma Glioma BEFREE 24621529
★☆☆☆☆
Found in Text Mining only
Glioma Glioma Pubtator 28086236 Associate
★☆☆☆☆
Found in Text Mining only