Gene Gene information from NCBI Gene database.
Entrez ID 60681
Gene name FKBP prolyl isomerase 10
Gene symbol FKBP10
Synonyms (NCBI Gene)
BRKSBRKS1FKBP65OI11OI6PPIASETLH1hFKBP65
Chromosome 17
Chromosome location 17q21.2
Summary The protein encoded by this gene belongs to the FKBP-type peptidyl-prolyl cis/trans isomerase (PPIase) family. This protein localizes to the endoplasmic reticulum and acts as a molecular chaperone. Alternatively spliced variants encoding different isoform
SNPs SNP information provided by dbSNP.
22
SNP ID Visualize variation Clinical significance Consequence
rs61749879 T>C Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance Missense variant, coding sequence variant
rs137853883 C>-,CC Pathogenic Coding sequence variant, frameshift variant
rs140027863 C>A,G,T Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance Intron variant
rs141387386 G>T Likely-pathogenic, uncertain-significance Intron variant
rs372896892 C>G,T Pathogenic Stop gained, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
112
miRTarBase ID miRNA Experiments Reference
MIRT021739 hsa-miR-132-3p Microarray 17612493
MIRT021875 hsa-miR-128-3p Microarray 17612493
MIRT025084 hsa-miR-181a-5p Microarray 17612493
MIRT051795 hsa-let-7c-5p CLASH 23622248
MIRT440641 hsa-miR-218-5p HITS-CLIP 23212916
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
21
GO ID Ontology Definition Evidence Reference
GO:0001701 Process In utero embryonic development IEA
GO:0003755 Function Peptidyl-prolyl cis-trans isomerase activity IBA
GO:0003755 Function Peptidyl-prolyl cis-trans isomerase activity IEA
GO:0003755 Function Peptidyl-prolyl cis-trans isomerase activity ISS
GO:0005509 Function Calcium ion binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607063 18169 ENSG00000141756
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96AY3
Protein name Peptidyl-prolyl cis-trans isomerase FKBP10 (PPIase FKBP10) (EC 5.2.1.8) (65 kDa FK506-binding protein) (65 kDa FKBP) (FKBP-65) (FK506-binding protein 10) (FKBP-10) (Immunophilin FKBP65) (Rotamase)
Protein function PPIases accelerate the folding of proteins during protein synthesis.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00254 FKBP_C 55 147 FKBP-type peptidyl-prolyl cis-trans isomerase Domain
PF00254 FKBP_C 167 259 FKBP-type peptidyl-prolyl cis-trans isomerase Domain
PF00254 FKBP_C 279 371 FKBP-type peptidyl-prolyl cis-trans isomerase Domain
PF00254 FKBP_C 392 483 FKBP-type peptidyl-prolyl cis-trans isomerase Domain
PF13202 EF-hand_5 503 526 EF hand Domain
PF13202 EF-hand_5 547 569 EF hand Domain
Sequence
Sequence length 582
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
28
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormality of the skeletal system Pathogenic rs137853883 RCV001814173
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Bruck syndrome Pathogenic rs141847881 RCV001260285
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Bruck syndrome 1 Likely pathogenic; Pathogenic rs782682320, rs2144041758, rs2144041488, rs869320752, rs2144069621, rs1567856056, rs2544434003, rs137853884, rs387906960, rs1555616552, rs137853883, rs397509383, rs397514674, rs1567855132 RCV005017026
RCV002244230
RCV002250878
RCV000190460
RCV004798056
View all (11 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
FKBP10-related disorder Pathogenic rs137853884 RCV003964811
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Adrenocortical carcinoma, hereditary Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARTHROGRYPOSIS-LIKE SYNDROME ClinGen
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BONE FRAGILITY WITH CONTRACTURES, ARTERIAL RUPTURE, AND DEAFNESS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acquired Kyphoscoliosis Acquired Kyphoscoliosis HPO_DG
★☆☆☆☆
Found in Text Mining only
AMYOTROPHIC LATERAL SCLEROSIS 1 Lateral Sclerosis BEFREE 10077670
★☆☆☆☆
Found in Text Mining only
Arthrogryposis Arthrogryposis multiplex congenita BEFREE 23712425
★☆☆☆☆
Found in Text Mining only
Arthrogryposis Arthrogryposis Pubtator 23712425 Associate
★☆☆☆☆
Found in Text Mining only
Arthrogryposis Arthrogryposis multiplex congenita HPO_DG
★☆☆☆☆
Found in Text Mining only
Brachycephaly Brachycephaly HPO_DG
★☆☆☆☆
Found in Text Mining only
Brain Neoplasms Brain neoplasms Pubtator 37201304 Associate
★☆☆☆☆
Found in Text Mining only
Bruck syndrome Bruck Syndrome BEFREE 20839288, 21567934, 22085994, 22107750, 22689593, 23613367, 23712425, 25931047, 27146342, 27298363, 28206698, 28378777, 29177700, 29499418, 29512769
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Bruck syndrome Bruck Syndrome ORPHANET_DG 22085994, 22689593, 22949511
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Bruck syndrome Bruck Syndrome Orphanet
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)