Gene Gene information from NCBI Gene database.
Entrez ID 60558
Gene name GTP binding elongation factor GUF1
Gene symbol GUF1
Synonyms (NCBI Gene)
DEE40EF-4EF4EIEE40
Chromosome 4
Chromosome location 4p12
Summary This gene encodes a GTPase that triggers back-translocation of the elongating ribosome during mitochondrial protein synthesis. The protein contains a highly conserved C-terminal domain not found in other GTPases that facilitates tRNA binding. The encoded
SNPs SNP information provided by dbSNP.
2
SNP ID Visualize variation Clinical significance Consequence
rs116062572 C>T Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant, 5 prime UTR variant
rs879255631 G>T Pathogenic Coding sequence variant, intron variant, missense variant
miRNA miRNA information provided by mirtarbase database.
654
miRTarBase ID miRNA Experiments Reference
MIRT029058 hsa-miR-26b-5p Microarray 19088304
MIRT460390 hsa-miR-4695-5p HITS-CLIP 23706177
MIRT460389 hsa-miR-1910-3p HITS-CLIP 23706177
MIRT460388 hsa-miR-6511a-5p HITS-CLIP 23706177
MIRT460387 hsa-miR-3174 HITS-CLIP 23706177
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
15
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0003924 Function GTPase activity IEA
GO:0005525 Function GTP binding IEA
GO:0005739 Component Mitochondrion HTP 34800366
GO:0005739 Component Mitochondrion IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
617064 25799 ENSG00000151806
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8N442
Protein name Translation factor GUF1, mitochondrial (EC 3.6.5.-) (Elongation factor 4 homolog) (EF-4) (GTPase GUF1) (Ribosomal back-translocase)
Protein function Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-depende
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00009 GTP_EFTU 66 245 Elongation factor Tu GTP binding domain Domain
PF03144 GTP_EFTU_D2 268 338 Elongation factor Tu domain 2 Domain
PF00679 EFG_C 468 557 Elongation factor G C-terminus Domain
PF06421 LepA_C 558 664 GTP-binding protein LepA C-terminus Family
Sequence
Sequence length 669
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
25
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Developmental and epileptic encephalopathy, 40 Pathogenic rs879255631 RCV000239484
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Adrenocortical carcinoma, hereditary Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cholangiocarcinoma Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Chronic lymphocytic leukemia/small lymphocytic lymphoma Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Cerebral cortical atrophy Cerebral cortical atrophy HPO_DG
★☆☆☆☆
Found in Text Mining only
Choreoathetosis Choreoathetosis HPO_DG
★☆☆☆☆
Found in Text Mining only
Developmental regression Developmental regression HPO_DG
★☆☆☆☆
Found in Text Mining only
Epileptic encephalopathy Epileptic encephalopathy HPO_DG
★☆☆☆☆
Found in Text Mining only
EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 40 Epileptic encephalopathy UNIPROT_DG 26486472
★☆☆☆☆
Found in Text Mining only
EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 40 Epileptic encephalopathy GENOMICS_ENGLAND_DG 26486472
★☆☆☆☆
Found in Text Mining only
EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 40 Epileptic encephalopathy CTD_human_DG
★☆☆☆☆
Found in Text Mining only
Infantile spasms syndrome Spasms Syndrome Orphanet
★☆☆☆☆
Found in Text Mining only
Spasms Infantile Infantile spasms Pubtator 26486472 Associate
★☆☆☆☆
Found in Text Mining only
Thyroid Neoplasms Thyroid cancer Pubtator 37355885 Associate
★☆☆☆☆
Found in Text Mining only