Gene Gene information from NCBI Gene database.
Entrez ID 5889
Gene name RAD51 paralog C
Gene symbol RAD51C
Synonyms (NCBI Gene)
BROVCA3FANCOR51H3RAD51L2
Chromosome 17
Chromosome location 17q22
Summary This gene is a member of the RAD51 family. RAD51 family members are highly similar to bacterial RecA and Saccharomyces cerevisiae Rad51 and are known to be involved in the homologous recombination and repair of DNA. This protein can interact with other RA
SNPs SNP information provided by dbSNP.
83
SNP ID Visualize variation Clinical significance Consequence
rs140804406 C>T Conflicting-interpretations-of-pathogenicity, uncertain-significance Genic downstream transcript variant, missense variant, non coding transcript variant, coding sequence variant
rs145310733 A>G Likely-pathogenic Splice acceptor variant, genic downstream transcript variant
rs147241704 G>A Uncertain-significance, conflicting-interpretations-of-pathogenicity, likely-benign Missense variant, non coding transcript variant, genic downstream transcript variant, coding sequence variant
rs149228565 A>T Uncertain-significance, conflicting-interpretations-of-pathogenicity, likely-benign 5 prime UTR variant, synonymous variant, non coding transcript variant, coding sequence variant
rs200293302 C>T Pathogenic Non coding transcript variant, genic downstream transcript variant, stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
25
miRTarBase ID miRNA Experiments Reference
MIRT000898 hsa-miR-15a-5p Microarray 18362358
MIRT000897 hsa-miR-16-5p Microarray 18362358
MIRT029315 hsa-miR-26b-5p Microarray 19088304
MIRT048689 hsa-miR-99a-5p CLASH 23622248
MIRT048598 hsa-miR-100-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
47
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0000400 Function Four-way junction DNA binding IBA
GO:0000400 Function Four-way junction DNA binding IDA 20207730
GO:0000707 Process Meiotic DNA recombinase assembly IBA
GO:0000722 Process Telomere maintenance via recombination IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602774 9820 ENSG00000108384
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O43502
Protein name DNA repair protein RAD51 homolog 3 (R51H3) (RAD51 homolog C) (RAD51-like protein 2)
Protein function Essential for the homologous recombination (HR) pathway of DNA repair. Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents. Part of the RAD5
PDB 8FAZ , 8GBJ , 8OUY , 8OUZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08423 Rad51 31 349 Rad51 Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in a variety of tissues, with highest expression in testis, heart muscle, spleen and prostate.
Sequence
Sequence length 376
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Homologous recombination
Fanconi anemia pathway
  HDR through Homologous Recombination (HRR)
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Resolution of D-loop Structures through Holliday Junction Intermediates
Homologous DNA Pairing and Strand Exchange
Presynaptic phase of homologous DNA pairing and strand exchange
Factors involved in megakaryocyte development and platelet production
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
43
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Breast and/or ovarian cancer Likely pathogenic; Pathogenic rs1413872299, rs587781410, rs587781490, rs587781995, rs587782702, rs786201909, rs387907159, rs2047958236, rs2048273755 RCV003492253
RCV001271004
RCV001271006
RCV001271008
RCV001798459
View all (4 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Breast carcinoma Pathogenic; Likely pathogenic rs2143961266, rs200293302, rs770637624 RCV001579300
RCV001554248
RCV001554261
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Breast-ovarian cancer, familial, susceptibility to, 1 Pathogenic rs730881939, rs2047814459 RCV004804701
RCV001090199
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Breast-ovarian cancer, familial, susceptibility to, 3 Pathogenic; Likely pathogenic rs1233795152, rs2143746162, rs2143797889, rs2143853617, rs2143963184, rs2143670048, rs1555593939, rs2143748292, rs1413872299, rs2143798753, rs201529791, rs2143800709, rs1567794476, rs876658644, rs1555599090
View all (149 more)
RCV004037676
RCV001779161
RCV003463007
RCV004037683
RCV004037654
View all (179 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Breast and Ovarian Cancer Susceptibility Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BREAST NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Breast-ovarian cancer, familial, susceptibility to, 2 Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Childhood neoplasm Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute monocytic leukemia Monocytic Leukemia GENOMICS_ENGLAND_DG 28297620
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 34367470 Associate
★☆☆☆☆
Found in Text Mining only
Anus, Imperforate Imperforate anus HPO_DG
★☆☆☆☆
Found in Text Mining only
Astigmatism Astigmatism HPO_DG
★☆☆☆☆
Found in Text Mining only
Ataxia Ataxia Pubtator 27296891 Associate
★☆☆☆☆
Found in Text Mining only
Atrial Septal Defects Atrial Septal Defect HPO_DG
★☆☆☆☆
Found in Text Mining only
Azoospermia Azoospermia HPO_DG
★☆☆☆☆
Found in Text Mining only
bilateral breast cancer Breast Cancer BEFREE 23117857
★☆☆☆☆
Found in Text Mining only
Blepharoptosis Ptosis HPO_DG
★☆☆☆☆
Found in Text Mining only
Breast Cancer, Familial Breast Cancer CLINGEN_DG 20400964, 21980511, 22167183, 22451500, 22538716, 25292187, 28418444
★☆☆☆☆
Found in Text Mining only