BEND3 (BEN domain containing 3)

Gene

• Entrez ID: 57673
• Gene name: BEN domain containing 3
• Gene symbol: BEND3
• Synonyms (NCBI Gene): KIAA1553
• Chromosome: 6
• Chromosome location: 6q21

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT022378	hsa-miR-124-3p	Proteomics;Microarray	18668037
MIRT045003	hsa-miR-186-5p	CLASH	23622248
MIRT042217	hsa-miR-484	CLASH	23622248
MIRT710081	hsa-miR-942-3p	HITS-CLIP	19536157
MIRT710080	hsa-miR-449b-3p	HITS-CLIP	19536157
MIRT710079	hsa-miR-4252	HITS-CLIP	19536157
MIRT710078	hsa-miR-4662a-5p	HITS-CLIP	19536157
MIRT710081	hsa-miR-942-3p	HITS-CLIP	19536157
MIRT710080	hsa-miR-449b-3p	HITS-CLIP	19536157
MIRT710079	hsa-miR-4252	HITS-CLIP	19536157
MIRT710078	hsa-miR-4662a-5p	HITS-CLIP	19536157
MIRT507969	hsa-miR-19b-3p	PAR-CLIP	20371350
MIRT507968	hsa-miR-19a-3p	PAR-CLIP	20371350
MIRT507967	hsa-miR-7852-3p	PAR-CLIP	20371350
MIRT507969	hsa-miR-19b-3p	PAR-CLIP	21572407
MIRT507968	hsa-miR-19a-3p	PAR-CLIP	21572407
MIRT507967	hsa-miR-7852-3p	PAR-CLIP	21572407
MIRT507969	hsa-miR-19b-3p	PAR-CLIP	23446348
MIRT507968	hsa-miR-19a-3p	PAR-CLIP	23446348
MIRT507967	hsa-miR-7852-3p	PAR-CLIP	23446348
MIRT507968	hsa-miR-19a-3p	HITS-CLIP	22473208
MIRT507969	hsa-miR-19b-3p	HITS-CLIP	22473208
MIRT710081	hsa-miR-942-3p	HITS-CLIP	19536157
MIRT710080	hsa-miR-449b-3p	HITS-CLIP	19536157
MIRT710079	hsa-miR-4252	HITS-CLIP	19536157
MIRT710078	hsa-miR-4662a-5p	HITS-CLIP	19536157
MIRT710081	hsa-miR-942-3p	HITS-CLIP	19536157
MIRT710080	hsa-miR-449b-3p	HITS-CLIP	19536157
MIRT710079	hsa-miR-4252	HITS-CLIP	19536157
MIRT710078	hsa-miR-4662a-5p	HITS-CLIP	19536157
MIRT507969	hsa-miR-19b-3p	PAR-CLIP	20371350
MIRT507968	hsa-miR-19a-3p	PAR-CLIP	20371350
MIRT507967	hsa-miR-7852-3p	PAR-CLIP	20371350
MIRT507969	hsa-miR-19b-3p	PAR-CLIP	21572407
MIRT507968	hsa-miR-19a-3p	PAR-CLIP	21572407
MIRT507967	hsa-miR-7852-3p	PAR-CLIP	21572407
MIRT507969	hsa-miR-19b-3p	PAR-CLIP	23446348
MIRT507968	hsa-miR-19a-3p	PAR-CLIP	23446348
MIRT507967	hsa-miR-7852-3p	PAR-CLIP	23446348
MIRT820706	hsa-miR-1185	CLIP-seq
MIRT820707	hsa-miR-1206	CLIP-seq
MIRT820708	hsa-miR-1208	CLIP-seq
MIRT820709	hsa-miR-124	CLIP-seq
MIRT820710	hsa-miR-1245b-3p	CLIP-seq
MIRT820711	hsa-miR-1252	CLIP-seq
MIRT820712	hsa-miR-1254	CLIP-seq
MIRT820713	hsa-miR-125a-5p	CLIP-seq
MIRT820714	hsa-miR-125b	CLIP-seq
MIRT820715	hsa-miR-1264	CLIP-seq
MIRT820716	hsa-miR-1265	CLIP-seq
MIRT820717	hsa-miR-1276	CLIP-seq
MIRT820718	hsa-miR-1278	CLIP-seq
MIRT820719	hsa-miR-128	CLIP-seq
MIRT820720	hsa-miR-1290	CLIP-seq
MIRT820721	hsa-miR-1291	CLIP-seq
MIRT820722	hsa-miR-1298	CLIP-seq
MIRT820723	hsa-miR-1305	CLIP-seq
MIRT820724	hsa-miR-1322	CLIP-seq
MIRT820725	hsa-miR-1323	CLIP-seq
MIRT820726	hsa-miR-1343	CLIP-seq
MIRT820727	hsa-miR-137	CLIP-seq
MIRT820728	hsa-miR-141	CLIP-seq
MIRT820729	hsa-miR-144	CLIP-seq
MIRT820730	hsa-miR-181a	CLIP-seq
MIRT820731	hsa-miR-181b	CLIP-seq
MIRT820732	hsa-miR-181c	CLIP-seq
MIRT820733	hsa-miR-181d	CLIP-seq
MIRT820734	hsa-miR-185	CLIP-seq
MIRT820735	hsa-miR-1908	CLIP-seq
MIRT820736	hsa-miR-1972	CLIP-seq
MIRT820737	hsa-miR-200a	CLIP-seq
MIRT820738	hsa-miR-2278	CLIP-seq
MIRT820739	hsa-miR-24	CLIP-seq
MIRT820740	hsa-miR-27a	CLIP-seq
MIRT820741	hsa-miR-27b	CLIP-seq
MIRT820742	hsa-miR-296-5p	CLIP-seq
MIRT820743	hsa-miR-298	CLIP-seq
MIRT820744	hsa-miR-30a	CLIP-seq
MIRT820745	hsa-miR-30b	CLIP-seq
MIRT820746	hsa-miR-30c	CLIP-seq
MIRT820747	hsa-miR-30d	CLIP-seq
MIRT820748	hsa-miR-30e	CLIP-seq
MIRT820749	hsa-miR-3116	CLIP-seq
MIRT820750	hsa-miR-3123	CLIP-seq
MIRT820751	hsa-miR-3136-3p	CLIP-seq
MIRT820752	hsa-miR-3145-5p	CLIP-seq
MIRT820753	hsa-miR-3153	CLIP-seq
MIRT820754	hsa-miR-3154	CLIP-seq
MIRT820755	hsa-miR-3166	CLIP-seq
MIRT820756	hsa-miR-3167	CLIP-seq
MIRT820757	hsa-miR-3174	CLIP-seq
MIRT820758	hsa-miR-3184	CLIP-seq
MIRT820759	hsa-miR-328	CLIP-seq
MIRT820760	hsa-miR-329	CLIP-seq
MIRT820761	hsa-miR-342-5p	CLIP-seq
MIRT820762	hsa-miR-3605-5p	CLIP-seq
MIRT820763	hsa-miR-3609	CLIP-seq
MIRT820764	hsa-miR-3618	CLIP-seq
MIRT820765	hsa-miR-362-3p	CLIP-seq
MIRT820766	hsa-miR-3661	CLIP-seq
MIRT820767	hsa-miR-3662	CLIP-seq
MIRT820768	hsa-miR-3663-5p	CLIP-seq
MIRT820769	hsa-miR-3670	CLIP-seq
MIRT820770	hsa-miR-3675-3p	CLIP-seq
MIRT820771	hsa-miR-3676	CLIP-seq
MIRT820772	hsa-miR-3679-5p	CLIP-seq
MIRT820773	hsa-miR-3682-5p	CLIP-seq
MIRT820774	hsa-miR-3685	CLIP-seq
MIRT820775	hsa-miR-3692	CLIP-seq
MIRT820776	hsa-miR-3714	CLIP-seq
MIRT820777	hsa-miR-384	CLIP-seq
MIRT820778	hsa-miR-3910	CLIP-seq
MIRT820779	hsa-miR-3915	CLIP-seq
MIRT820780	hsa-miR-3922-5p	CLIP-seq
MIRT820781	hsa-miR-3923	CLIP-seq
MIRT820782	hsa-miR-3925-5p	CLIP-seq
MIRT820783	hsa-miR-3928	CLIP-seq
MIRT820784	hsa-miR-3937	CLIP-seq
MIRT820785	hsa-miR-3941	CLIP-seq
MIRT820786	hsa-miR-3976	CLIP-seq
MIRT820787	hsa-miR-3977	CLIP-seq
MIRT820788	hsa-miR-3978	CLIP-seq
MIRT820789	hsa-miR-421	CLIP-seq
MIRT820790	hsa-miR-423-5p	CLIP-seq
MIRT820791	hsa-miR-425	CLIP-seq
MIRT820792	hsa-miR-4254	CLIP-seq
MIRT820793	hsa-miR-4261	CLIP-seq
MIRT820794	hsa-miR-4262	CLIP-seq
MIRT820795	hsa-miR-4270	CLIP-seq
MIRT820796	hsa-miR-4272	CLIP-seq
MIRT820797	hsa-miR-4279	CLIP-seq
MIRT820798	hsa-miR-4281	CLIP-seq
MIRT820799	hsa-miR-4286	CLIP-seq
MIRT820800	hsa-miR-4290	CLIP-seq
MIRT820801	hsa-miR-4292	CLIP-seq
MIRT820802	hsa-miR-4306	CLIP-seq
MIRT820803	hsa-miR-4308	CLIP-seq
MIRT820804	hsa-miR-4311	CLIP-seq
MIRT820805	hsa-miR-4319	CLIP-seq
MIRT820806	hsa-miR-4328	CLIP-seq
MIRT820807	hsa-miR-4330	CLIP-seq
MIRT820808	hsa-miR-4441	CLIP-seq
MIRT820809	hsa-miR-4446-5p	CLIP-seq
MIRT820810	hsa-miR-4464	CLIP-seq
MIRT820811	hsa-miR-4468	CLIP-seq
MIRT820812	hsa-miR-4476	CLIP-seq
MIRT820813	hsa-miR-4477a	CLIP-seq
MIRT820814	hsa-miR-4477b	CLIP-seq
MIRT820815	hsa-miR-4490	CLIP-seq
MIRT820816	hsa-miR-4495	CLIP-seq
MIRT820817	hsa-miR-452	CLIP-seq
MIRT820818	hsa-miR-4521	CLIP-seq
MIRT820819	hsa-miR-4522	CLIP-seq
MIRT820820	hsa-miR-4528	CLIP-seq
MIRT820821	hsa-miR-4529-5p	CLIP-seq
MIRT820822	hsa-miR-4534	CLIP-seq
MIRT820823	hsa-miR-4644	CLIP-seq
MIRT820824	hsa-miR-4664-5p	CLIP-seq
MIRT820825	hsa-miR-4676-3p	CLIP-seq
MIRT820826	hsa-miR-4707-3p	CLIP-seq
MIRT820827	hsa-miR-4709-5p	CLIP-seq
MIRT820828	hsa-miR-4710	CLIP-seq
MIRT820829	hsa-miR-4744	CLIP-seq
MIRT820830	hsa-miR-4748	CLIP-seq
MIRT820831	hsa-miR-4751	CLIP-seq
MIRT820832	hsa-miR-4755-3p	CLIP-seq
MIRT820833	hsa-miR-4755-5p	CLIP-seq
MIRT820834	hsa-miR-4771	CLIP-seq
MIRT820835	hsa-miR-4774-5p	CLIP-seq
MIRT820836	hsa-miR-4786-5p	CLIP-seq
MIRT820837	hsa-miR-4792	CLIP-seq
MIRT820838	hsa-miR-4799-5p	CLIP-seq
MIRT820839	hsa-miR-4803	CLIP-seq
MIRT820840	hsa-miR-490-3p	CLIP-seq
MIRT820841	hsa-miR-506	CLIP-seq
MIRT820842	hsa-miR-523	CLIP-seq
MIRT820843	hsa-miR-543	CLIP-seq
MIRT820844	hsa-miR-544b	CLIP-seq
MIRT820845	hsa-miR-548a-5p	CLIP-seq
MIRT820846	hsa-miR-548ab	CLIP-seq
MIRT820847	hsa-miR-548ah	CLIP-seq
MIRT820848	hsa-miR-548ak	CLIP-seq
MIRT820849	hsa-miR-548b-5p	CLIP-seq
MIRT820850	hsa-miR-548c-5p	CLIP-seq
MIRT820851	hsa-miR-548d-5p	CLIP-seq
MIRT820852	hsa-miR-548h	CLIP-seq
MIRT820853	hsa-miR-548i	CLIP-seq
MIRT820854	hsa-miR-548j	CLIP-seq
MIRT820855	hsa-miR-548n	CLIP-seq
MIRT820856	hsa-miR-548o	CLIP-seq
MIRT820857	hsa-miR-548w	CLIP-seq
MIRT820858	hsa-miR-548y	CLIP-seq
MIRT820859	hsa-miR-559	CLIP-seq
MIRT820860	hsa-miR-583	CLIP-seq
MIRT820861	hsa-miR-603	CLIP-seq
MIRT820862	hsa-miR-619	CLIP-seq
MIRT820863	hsa-miR-625	CLIP-seq
MIRT820864	hsa-miR-626	CLIP-seq
MIRT820865	hsa-miR-627	CLIP-seq
MIRT820866	hsa-miR-629	CLIP-seq
MIRT820867	hsa-miR-631	CLIP-seq
MIRT820868	hsa-miR-642a	CLIP-seq
MIRT820869	hsa-miR-642b	CLIP-seq
MIRT820870	hsa-miR-661	CLIP-seq
MIRT820871	hsa-miR-663	CLIP-seq
MIRT820872	hsa-miR-670	CLIP-seq
MIRT820873	hsa-miR-876-5p	CLIP-seq
MIRT820874	hsa-miR-924	CLIP-seq
MIRT820875	hsa-miR-934	CLIP-seq
MIRT1942572	hsa-miR-1207-3p	CLIP-seq
MIRT820708	hsa-miR-1208	CLIP-seq
MIRT1942573	hsa-miR-1262	CLIP-seq
MIRT1942574	hsa-miR-1273g	CLIP-seq
MIRT1942575	hsa-miR-127-5p	CLIP-seq
MIRT820720	hsa-miR-1290	CLIP-seq
MIRT1942576	hsa-miR-1293	CLIP-seq
MIRT1942577	hsa-miR-1324	CLIP-seq
MIRT820726	hsa-miR-1343	CLIP-seq
MIRT820728	hsa-miR-141	CLIP-seq
MIRT820730	hsa-miR-181a	CLIP-seq
MIRT820731	hsa-miR-181b	CLIP-seq
MIRT820732	hsa-miR-181c	CLIP-seq
MIRT820733	hsa-miR-181d	CLIP-seq
MIRT1942578	hsa-miR-197	CLIP-seq
MIRT1942579	hsa-miR-19a	CLIP-seq
MIRT1942580	hsa-miR-19b	CLIP-seq
MIRT820737	hsa-miR-200a	CLIP-seq
MIRT1942581	hsa-miR-2110	CLIP-seq
MIRT1942582	hsa-miR-2114	CLIP-seq
MIRT1942583	hsa-miR-2116	CLIP-seq
MIRT1942584	hsa-miR-224	CLIP-seq
MIRT1942585	hsa-miR-3064-5p	CLIP-seq
MIRT820752	hsa-miR-3145-5p	CLIP-seq
MIRT820755	hsa-miR-3166	CLIP-seq
MIRT820756	hsa-miR-3167	CLIP-seq
MIRT1942586	hsa-miR-3179	CLIP-seq
MIRT820760	hsa-miR-329	CLIP-seq
MIRT1942587	hsa-miR-339-5p	CLIP-seq
MIRT1942588	hsa-miR-3545-3p	CLIP-seq
MIRT1942589	hsa-miR-361-5p	CLIP-seq
MIRT1942590	hsa-miR-3622a-3p	CLIP-seq
MIRT1942591	hsa-miR-3622b-3p	CLIP-seq
MIRT820765	hsa-miR-362-3p	CLIP-seq
MIRT820767	hsa-miR-3662	CLIP-seq
MIRT820770	hsa-miR-3675-3p	CLIP-seq
MIRT1942592	hsa-miR-3682-3p	CLIP-seq
MIRT820774	hsa-miR-3685	CLIP-seq
MIRT820777	hsa-miR-384	CLIP-seq
MIRT820780	hsa-miR-3922-5p	CLIP-seq
MIRT1942593	hsa-miR-3925-3p	CLIP-seq
MIRT1942594	hsa-miR-3938	CLIP-seq
MIRT820785	hsa-miR-3941	CLIP-seq
MIRT820788	hsa-miR-3978	CLIP-seq
MIRT820793	hsa-miR-4261	CLIP-seq
MIRT820794	hsa-miR-4262	CLIP-seq
MIRT1942595	hsa-miR-4271	CLIP-seq
MIRT820799	hsa-miR-4286	CLIP-seq
MIRT1942596	hsa-miR-4294	CLIP-seq
MIRT820806	hsa-miR-4328	CLIP-seq
MIRT1942597	hsa-miR-4455	CLIP-seq
MIRT820814	hsa-miR-4477b	CLIP-seq
MIRT1942598	hsa-miR-4483	CLIP-seq
MIRT820817	hsa-miR-452	CLIP-seq
MIRT820818	hsa-miR-4521	CLIP-seq
MIRT1942599	hsa-miR-4525	CLIP-seq
MIRT820821	hsa-miR-4529-5p	CLIP-seq
MIRT1942600	hsa-miR-4667-5p	CLIP-seq
MIRT1942601	hsa-miR-4668-5p	CLIP-seq
MIRT1942602	hsa-miR-4670-3p	CLIP-seq
MIRT820825	hsa-miR-4676-3p	CLIP-seq
MIRT1942603	hsa-miR-4691-3p	CLIP-seq
MIRT1942604	hsa-miR-4700-5p	CLIP-seq
MIRT1942605	hsa-miR-4701-3p	CLIP-seq
MIRT1942606	hsa-miR-4715-3p	CLIP-seq
MIRT1942607	hsa-miR-4716-3p	CLIP-seq
MIRT1942608	hsa-miR-4725-3p	CLIP-seq
MIRT1942609	hsa-miR-4761-5p	CLIP-seq
MIRT820834	hsa-miR-4771	CLIP-seq
MIRT820836	hsa-miR-4786-5p	CLIP-seq
MIRT1942610	hsa-miR-4793-3p	CLIP-seq
MIRT1942611	hsa-miR-4797-3p	CLIP-seq
MIRT1942612	hsa-miR-485-3p	CLIP-seq
MIRT1942613	hsa-miR-486-5p	CLIP-seq
MIRT820840	hsa-miR-490-3p	CLIP-seq
MIRT1942614	hsa-miR-492	CLIP-seq
MIRT820845	hsa-miR-548a-5p	CLIP-seq
MIRT820846	hsa-miR-548ab	CLIP-seq
MIRT820848	hsa-miR-548ak	CLIP-seq
MIRT820849	hsa-miR-548b-5p	CLIP-seq
MIRT820850	hsa-miR-548c-5p	CLIP-seq
MIRT820851	hsa-miR-548d-5p	CLIP-seq
MIRT820852	hsa-miR-548h	CLIP-seq
MIRT820853	hsa-miR-548i	CLIP-seq
MIRT820854	hsa-miR-548j	CLIP-seq
MIRT820855	hsa-miR-548n	CLIP-seq
MIRT820857	hsa-miR-548w	CLIP-seq
MIRT820858	hsa-miR-548y	CLIP-seq
MIRT820859	hsa-miR-559	CLIP-seq
MIRT1942615	hsa-miR-562	CLIP-seq
MIRT820861	hsa-miR-603	CLIP-seq
MIRT1942616	hsa-miR-604	CLIP-seq
MIRT1942617	hsa-miR-609	CLIP-seq
MIRT820862	hsa-miR-619	CLIP-seq
MIRT820866	hsa-miR-629	CLIP-seq
MIRT1942618	hsa-miR-637	CLIP-seq
MIRT1942619	hsa-miR-647	CLIP-seq
MIRT820872	hsa-miR-670	CLIP-seq
MIRT820873	hsa-miR-876-5p	CLIP-seq
MIRT2181330	hsa-miR-1197	CLIP-seq
MIRT820707	hsa-miR-1206	CLIP-seq
MIRT820716	hsa-miR-1265	CLIP-seq
MIRT820717	hsa-miR-1276	CLIP-seq
MIRT2181331	hsa-miR-1287	CLIP-seq
MIRT820727	hsa-miR-137	CLIP-seq
MIRT820728	hsa-miR-141	CLIP-seq
MIRT2181332	hsa-miR-150	CLIP-seq
MIRT1942578	hsa-miR-197	CLIP-seq
MIRT2181333	hsa-miR-1976	CLIP-seq
MIRT820737	hsa-miR-200a	CLIP-seq
MIRT1942581	hsa-miR-2110	CLIP-seq
MIRT1942582	hsa-miR-2114	CLIP-seq
MIRT1942584	hsa-miR-224	CLIP-seq
MIRT2181334	hsa-miR-2392	CLIP-seq
MIRT1942585	hsa-miR-3064-5p	CLIP-seq
MIRT820744	hsa-miR-30a	CLIP-seq
MIRT820745	hsa-miR-30b	CLIP-seq
MIRT820746	hsa-miR-30c	CLIP-seq
MIRT820747	hsa-miR-30d	CLIP-seq
MIRT820748	hsa-miR-30e	CLIP-seq
MIRT2181335	hsa-miR-3143	CLIP-seq
MIRT1942586	hsa-miR-3179	CLIP-seq
MIRT820758	hsa-miR-3184	CLIP-seq
MIRT2181336	hsa-miR-3186-5p	CLIP-seq
MIRT1942588	hsa-miR-3545-3p	CLIP-seq
MIRT820767	hsa-miR-3662	CLIP-seq
MIRT820769	hsa-miR-3670	CLIP-seq
MIRT820770	hsa-miR-3675-3p	CLIP-seq
MIRT1942592	hsa-miR-3682-3p	CLIP-seq
MIRT1942593	hsa-miR-3925-3p	CLIP-seq
MIRT820790	hsa-miR-423-5p	CLIP-seq
MIRT1942595	hsa-miR-4271	CLIP-seq
MIRT820816	hsa-miR-4495	CLIP-seq
MIRT1942599	hsa-miR-4525	CLIP-seq
MIRT820820	hsa-miR-4528	CLIP-seq
MIRT1942600	hsa-miR-4667-5p	CLIP-seq
MIRT1942604	hsa-miR-4700-5p	CLIP-seq
MIRT820828	hsa-miR-4710	CLIP-seq
MIRT1942607	hsa-miR-4716-3p	CLIP-seq
MIRT1942608	hsa-miR-4725-3p	CLIP-seq
MIRT1942609	hsa-miR-4761-5p	CLIP-seq
MIRT820837	hsa-miR-4792	CLIP-seq
MIRT1942612	hsa-miR-485-3p	CLIP-seq
MIRT820840	hsa-miR-490-3p	CLIP-seq
MIRT820843	hsa-miR-543	CLIP-seq
MIRT2181337	hsa-miR-545	CLIP-seq
MIRT2181338	hsa-miR-548a-3p	CLIP-seq
MIRT820845	hsa-miR-548a-5p	CLIP-seq
MIRT820846	hsa-miR-548ab	CLIP-seq
MIRT820848	hsa-miR-548ak	CLIP-seq
MIRT820849	hsa-miR-548b-5p	CLIP-seq
MIRT820850	hsa-miR-548c-5p	CLIP-seq
MIRT820851	hsa-miR-548d-5p	CLIP-seq
MIRT2181339	hsa-miR-548e	CLIP-seq
MIRT2181340	hsa-miR-548f	CLIP-seq
MIRT820852	hsa-miR-548h	CLIP-seq
MIRT820853	hsa-miR-548i	CLIP-seq
MIRT820854	hsa-miR-548j	CLIP-seq
MIRT820855	hsa-miR-548n	CLIP-seq
MIRT820857	hsa-miR-548w	CLIP-seq
MIRT820858	hsa-miR-548y	CLIP-seq
MIRT820859	hsa-miR-559	CLIP-seq
MIRT1942615	hsa-miR-562	CLIP-seq
MIRT2181341	hsa-miR-563	CLIP-seq
MIRT820860	hsa-miR-583	CLIP-seq
MIRT1942616	hsa-miR-604	CLIP-seq
MIRT820862	hsa-miR-619	CLIP-seq
MIRT820865	hsa-miR-627	CLIP-seq
MIRT1942618	hsa-miR-637	CLIP-seq
MIRT1942619	hsa-miR-647	CLIP-seq
MIRT2181342	hsa-miR-891b	CLIP-seq
MIRT2181343	hsa-miR-9	CLIP-seq
MIRT820874	hsa-miR-924	CLIP-seq
MIRT820768	hsa-miR-3663-5p	CLIP-seq
MIRT820798	hsa-miR-4281	CLIP-seq
MIRT820800	hsa-miR-4290	CLIP-seq
MIRT2484659	hsa-miR-2355-3p	CLIP-seq
MIRT1942587	hsa-miR-339-5p	CLIP-seq
MIRT1942588	hsa-miR-3545-3p	CLIP-seq
MIRT1942594	hsa-miR-3938	CLIP-seq
MIRT1942609	hsa-miR-4761-5p	CLIP-seq
MIRT1942613	hsa-miR-486-5p	CLIP-seq
MIRT820872	hsa-miR-670	CLIP-seq
MIRT2484660	hsa-miR-676	CLIP-seq
MIRT2484659	hsa-miR-2355-3p	CLIP-seq
MIRT1942586	hsa-miR-3179	CLIP-seq
MIRT1942587	hsa-miR-339-5p	CLIP-seq
MIRT1942588	hsa-miR-3545-3p	CLIP-seq
MIRT1942594	hsa-miR-3938	CLIP-seq
MIRT1942609	hsa-miR-4761-5p	CLIP-seq
MIRT1942613	hsa-miR-486-5p	CLIP-seq
MIRT820872	hsa-miR-670	CLIP-seq
MIRT2484660	hsa-miR-676	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IBA
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IDA	21914818
GO:0000182	Function	RDNA binding	IBA
GO:0000182	Function	RDNA binding	IDA	26100909
GO:0000183	Process	RDNA heterochromatin formation	IBA
GO:0000183	Process	RDNA heterochromatin formation	IEA
GO:0000183	Process	RDNA heterochromatin formation	IMP	26100909
GO:0000792	Component	Heterochromatin	IDA	21914818
GO:0000792	Component	Heterochromatin	IEA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	21914818, 25416956, 26100909, 28977671, 32296183
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005730	Component	Nucleolus	IDA	26100909
GO:0005730	Component	Nucleolus	IEA
GO:0006325	Process	Chromatin organization	IEA
GO:0006346	Process	DNA methylation-dependent constitutive heterochromatin formation	IMP	26100909
GO:0051260	Process	Protein homooligomerization	IDA	28977671
GO:1903580	Process	Positive regulation of ATP metabolic process	IDA	28977671

Other IDs

• MIM: 616374
• HGNC: 23040
• e!Ensembl: ENSG00000178409

Protein

• UniProt ID: Q5T5X7
• Protein name: BEN domain-containing protein 3
• Protein function: Transcriptional repressor which associates with the NoRC (nucleolar remodeling complex) complex and plays a key role in repressing rDNA transcription. The sumoylated form modulates the stability of the NoRC complex component BAZ2A/TIP5 by contro
• PDB: 5JNO, 7W27
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF10523	BEN	265 → 340	BEN domain	Domain
  PF10523	BEN	409 → 482	BEN domain	Domain
  PF10523	BEN	572 → 647	BEN domain	Domain
  PF10523	BEN	738 → 813	BEN domain	Domain

• Tissue specificity: TISSUE SPECIFICITY: Expressed at least in heart, kidney, liver, ovary and spleen, with highest levels in spleen and lowest in heart. Expressed on the surface of T-cells. {ECO:0000269|PubMed:21914818, ECO:0000269|PubMed:25400923}.
• Sequence:

  MNSTEFTEDVEEVLKSITVKVETEAEDAALDCSVNSRTSEKHSVDSVLTALQDSSKRKQL
  VSDGLLDSVPGVKRRRLIPEALLAGMRNRENSSPCQGNGEQAGRGRSLGNVWPGEEEPCN
  DATTPSYKKPLYGISHKIMEKKNPPSGDLLNVYELFEKANASNSPSSLRLLNEPQKRDCG
  STGAGTDNDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVSRIKKQVSPTEMVAKF
  QPPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLE
  SLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREMEDSQPSGQVASFFEA
  EQVDPGHFLDNKDQEEALSLDRSSTIASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFP
  ELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDEL
  EGLGLDAGSEGDPPRDDCYDSSSLPDDISVVKVEDSFEGERPGRRSKKIWLVPIDFDKLE
  IPQPDFEVPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGS
  LGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKV
  HVPGPECRDLTSYAINPERFREEFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYL
  LSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLI
  RHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKKVEK

• Sequence length: 828

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
HYPOTHYROIDISM	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
METABOLIC SYNDROME	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PSORIASIS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TREATMENT-RESISTANT HYPERTENSION	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	36185995	Associate	★☆☆☆☆ Found in Text Mining only
Hypertensive disease	Hypertension	BEFREE	30399318		★☆☆☆☆ Found in Text Mining only