Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	57585
Gene name	Cramped chromatin regulator 1
Gene symbol	CRAMP1
Synonyms (NCBI Gene)	CRAMP1LHN1LTCE4
Chromosome	16
Chromosome location	16p13.3

Show/Hide all (58)

miRTarBase ID	miRNA	Experiments	Reference
MIRT724719	hsa-miR-490-3p	HITS-CLIP	19536157
MIRT724718	hsa-miR-619-3p	HITS-CLIP	19536157
MIRT724717	hsa-miR-6715a-3p	HITS-CLIP	19536157
MIRT724716	hsa-miR-584-3p	HITS-CLIP	19536157
MIRT724715	hsa-miR-3127-3p	HITS-CLIP	19536157
MIRT724714	hsa-miR-6756-3p	HITS-CLIP	19536157
MIRT724713	hsa-miR-3183	HITS-CLIP	19536157
MIRT724712	hsa-miR-4723-3p	HITS-CLIP	19536157
MIRT724711	hsa-miR-6769b-3p	HITS-CLIP	19536157
MIRT724710	hsa-miR-3690	HITS-CLIP	19536157
MIRT724709	hsa-miR-371b-5p	HITS-CLIP	19536157
MIRT724708	hsa-miR-373-5p	HITS-CLIP	19536157
MIRT724707	hsa-miR-616-5p	HITS-CLIP	19536157
MIRT724706	hsa-miR-371a-5p	HITS-CLIP	19536157
MIRT724705	hsa-miR-372-5p	HITS-CLIP	19536157
MIRT724704	hsa-miR-4326	HITS-CLIP	19536157
MIRT724703	hsa-miR-6715b-3p	HITS-CLIP	19536157
MIRT724702	hsa-miR-145-5p	HITS-CLIP	19536157
MIRT724701	hsa-miR-5195-3p	HITS-CLIP	19536157
MIRT724700	hsa-miR-7111-3p	HITS-CLIP	19536157
MIRT557244	hsa-miR-6780a-3p	HITS-CLIP	19536157
MIRT724699	hsa-miR-6881-3p	HITS-CLIP	19536157
MIRT712552	hsa-miR-6823-5p	HITS-CLIP	19536157
MIRT712551	hsa-miR-1-5p	HITS-CLIP	19536157
MIRT712550	hsa-miR-1293	HITS-CLIP	19536157
MIRT712549	hsa-miR-4483	HITS-CLIP	19536157
MIRT712548	hsa-miR-323a-5p	HITS-CLIP	19536157
MIRT712547	hsa-miR-6843-3p	HITS-CLIP	19536157
MIRT712546	hsa-miR-6848-3p	HITS-CLIP	19536157
MIRT712545	hsa-miR-937-5p	HITS-CLIP	19536157
MIRT702923	hsa-miR-3646	HITS-CLIP	23313552
MIRT702922	hsa-miR-651-3p	HITS-CLIP	23313552
MIRT702921	hsa-miR-942-3p	HITS-CLIP	23313552
MIRT702920	hsa-miR-3675-3p	HITS-CLIP	23313552
MIRT702919	hsa-miR-454-5p	HITS-CLIP	23313552
MIRT702918	hsa-miR-570-3p	HITS-CLIP	23313552
MIRT702917	hsa-miR-548aj-5p	HITS-CLIP	23313552
MIRT702916	hsa-miR-548f-5p	HITS-CLIP	23313552
MIRT702915	hsa-miR-548g-5p	HITS-CLIP	23313552
MIRT702914	hsa-miR-548x-5p	HITS-CLIP	23313552
MIRT702913	hsa-miR-5093	HITS-CLIP	23313552
MIRT702912	hsa-miR-579-3p	HITS-CLIP	23313552
MIRT702911	hsa-miR-664b-3p	HITS-CLIP	23313552
MIRT702910	hsa-miR-526b-5p	HITS-CLIP	23313552
MIRT557253	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT557252	hsa-miR-3529-3p	PAR-CLIP	21572407
MIRT557251	hsa-miR-5196-3p	PAR-CLIP	21572407
MIRT557250	hsa-miR-4794	PAR-CLIP	21572407
MIRT557249	hsa-miR-664a-5p	PAR-CLIP	21572407
MIRT557248	hsa-miR-149-5p	PAR-CLIP	21572407
MIRT557247	hsa-miR-3064-5p	PAR-CLIP	21572407
MIRT557246	hsa-miR-6504-5p	PAR-CLIP	21572407
MIRT557245	hsa-miR-4775	PAR-CLIP	21572407
MIRT557244	hsa-miR-6780a-3p	PAR-CLIP	21572407
MIRT557243	hsa-miR-4642	PAR-CLIP	21572407
MIRT557242	hsa-miR-182-5p	PAR-CLIP	21572407
MIRT557241	hsa-miR-1271-5p	PAR-CLIP	21572407
MIRT557240	hsa-miR-96-5p	PAR-CLIP	21572407

Show/Hide all (6)

GO ID	Ontology	Definition	Evidence
GO:0003677	Function	DNA binding	IEA
GO:0003682	Function	Chromatin binding	IBA
GO:0003682	Function	Chromatin binding	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0007389	Process	Pattern specification process	IBA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q96RY5

Protein name

Protein cramped-like (Cramped chromatin regulator homolog 1) (Hematological and neurological expressed 1-like protein)

Family and domains

Sequence

MTVKLGDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP
APPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGG
GSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRRQWESWSTEDKNTFFEGLYE
HGKDFEAIQNNIALKYKKKGKPASMVKNKEQVRHFYYRTWHKITKYIDFDHVFSRGLKKS
SQELYGLICYGELRKKIGGCMDDKNATKLNELIQVGATTVRYKGRNLRIKAPMCRALKKL
CDPDGLSDEEDQKPVRLPLKVPIELQPRNNHAWARVQSLAQNPRLRMIVELHRKVSSLIE
FLKQKWALHEVRVRKTLEERQLQDSCSAPMQEKVTLHLFPGENCTLTPLPGVARVVHSKA
FCTVHWQEGGRCKQSAKDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAA
DALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGA
LPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVL
APVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARP
PKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSL
PTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSP
RCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPN
SRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSEN
QSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAAT
SAGILSGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSI
PSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISL
PGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQP
HWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGN
SRDSFVSRSLADVAEVVDSQLVCMMNENSIDYISRFNDLAQELSIAEPGRREALFDGGGG
GPAVSDLSQ

Sequence length

1269

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (4)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ATRIAL FIBRILLATION	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
EPILEPSY	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (7)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Atrial Fibrillation	Atrial Fibrillation	GWASCAT_DG	30061737		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Epilepsy	Epilepsy	GWASCAT_DG	26220383		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Liver carcinoma	Liver carcinoma	BEFREE	30778199		★★★★★ ★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	29053395		★★★★★ ★☆☆☆☆ Found in Text Mining only
Non-Small Cell Lung Carcinoma	Lung carcinoma	BEFREE	29053395		★★★★★ ★☆☆☆☆ Found in Text Mining only
Squamous Cell Carcinoma of Head and Neck	Squamous cell carcinoma	Pubtator	37373553	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Triple Negative Breast Neoplasms	Triple Negative Breast Neoplasms	BEFREE	29249663		★★★★★ ★☆☆☆☆ Found in Text Mining only

CRAMP1 (cramped chromatin regulator 1)