Gene Gene information from NCBI Gene database.
Entrez ID 5745
Gene name Parathyroid hormone 1 receptor
Gene symbol PTH1R
Synonyms (NCBI Gene)
EKNSPFEPTHRPTHR1
Chromosome 3
Chromosome location 3p21.31
Summary The protein encoded by this gene is a member of the G-protein coupled receptor family 2. This protein is a receptor for parathyroid hormone (PTH) and for parathyroid hormone-like hormone (PTHLH). The activity of this receptor is mediated by G proteins whi
SNPs SNP information provided by dbSNP.
11
SNP ID Visualize variation Clinical significance Consequence
rs121434597 A>G Pathogenic Missense variant, coding sequence variant
rs121434598 A>C Pathogenic Missense variant, synonymous variant, coding sequence variant
rs121434599 C>T Pathogenic Missense variant, coding sequence variant
rs121434600 T>G Pathogenic Missense variant, coding sequence variant
rs121434602 C>G,T Pathogenic Missense variant, coding sequence variant
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
55
GO ID Ontology Definition Evidence Reference
GO:0001501 Process Skeletal system development IEA
GO:0001501 Process Skeletal system development TAS 9745456
GO:0001503 Process Ossification IEA
GO:0001701 Process In utero embryonic development IEA
GO:0002062 Process Chondrocyte differentiation IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
168468 9608 ENSG00000160801
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q03431
Protein name Parathyroid hormone/parathyroid hormone-related peptide receptor (PTH/PTHrP type I receptor) (PTH/PTHr receptor) (Parathyroid hormone 1 receptor) (PTH1 receptor)
Protein function G-protein-coupled receptor for parathyroid hormone (PTH) and for parathyroid hormone-related peptide (PTHLH) (PubMed:10913300, PubMed:18375760, PubMed:19674967, PubMed:27160269, PubMed:30975883, PubMed:35932760, PubMed:8397094). Ligand binding c
PDB 1BL1 , 3C4M , 3H3G , 3L2J , 4Z8J , 5EMB , 6NBF , 6NBH , 6NBI , 7UZO , 7UZP , 7VVJ , 7VVK , 7VVL , 7VVM , 7VVN , 7VVO , 7Y35 , 7Y36 , 8BIA , 8BJ0 , 8D51 , 8D52 , 8FLQ , 8FLR , 8FLS , 8FLT , 8FLU , 8GW8 , 8HA0 , 8HAF , 8HAO , 8JR9 , 9JR2 , 9JR3
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02793 HRM 105 173 Hormone receptor domain Family
PF00002 7tm_2 184 455 7 transmembrane receptor (Secretin family) Family
Tissue specificity TISSUE SPECIFICITY: Expressed in most tissues. Most abundant in kidney, bone and liver. {ECO:0000269|PubMed:8397094}.
Sequence
MGTARIAPGLALLLCCPVLSSAYALVDADDVMTKEEQIFLLHRAQAQCEKRLKEVLQRPA
SIMESDKGWTSASTSGKPRKDKASGKLYPESEEDKEAPTGSRYRGRPCLPEWDHILCWPL
GAPGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWELVPGHNRTWANYSECVKF
LTNETRE
REVFDRLGMIYTVGYSVSLASLTVAVLILAYFRRLHCTRNYIHMHLFLSFMLRAVSIFVK
DAVLYSGATLDEAERLTEEELRAIAQAPPPPATAAAGYAGCRVAVTFFLYFLATNYYWIL
VEGLYLHSLIFMAFFSEKKYLWGFTVFGWGLPAVFVAVWVSVRATLANTGCWDLSSGNKK
WIIQVPILASIVLNFILFINIVRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVH
YIVFMATPYTEVSGTLWQVQMHYEMLFNSFQGFFV
AIIYCFCNGEVQAEIKKSWSRWTLA
LDFKRKARSGSSSYSYGPMVSHTSVTNVGPRVGLGLPLSPRLLPTATTNGHPQLPGHAKP
GTPALETLETTPPAMAAPKDDGFLNGSCSGLDEEASGPERPPALLQEEWETVM
Sequence length 593
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Neuroactive ligand-receptor interaction
Hormone signaling
Parathyroid hormone synthesis, secretion and action
Endocrine and other factor-regulated calcium reabsorption
  Class B/2 (Secretin family receptors)
G alpha (s) signalling events
ADORA2B mediated anti-inflammatory cytokines production
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
30
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Chondrodysplasia Blomstrand type Pathogenic rs398122843, rs121434599, rs1304201852, rs121434604, rs2107055197 RCV000014751
RCV000014752
RCV000014753
RCV000014757
RCV000014758
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Eiken syndrome Pathogenic rs121434599, rs121434603 RCV002482867
RCV000014756
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Metaphyseal chondrodysplasia, Jansen type Pathogenic; Likely pathogenic rs121434600, rs121434597, rs121434598, rs121434599, rs121434602, rs769180471 RCV001332362
RCV000014749
RCV000014750
RCV002482867
RCV000014754
View all (2 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Primary failure of tooth eruption Pathogenic; Likely pathogenic rs2107039234, rs1575522892, rs2545050758, rs121434597, rs121434599, rs1575524795, rs2107035467, rs121434605, rs769180471 RCV002250276
RCV002289254
RCV003224790
RCV002247338
RCV002482867
View all (4 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
BLOMSTRAND LETHAL CHONDRODYSPLASIA Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Brachydactyly type E1 Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRACHYDACTYLY, TYPE E1 Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA, HEPATOCELLULAR CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acquired cubitus valgus Cubitus valgus HPO_DG
★☆☆☆☆
Found in Text Mining only
Anemia Anemia HPO_DG
★☆☆☆☆
Found in Text Mining only
Aortic coarctation Aortic Coarctation HPO_DG
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis BEFREE 28474257
★☆☆☆☆
Found in Text Mining only
Blomstrand lethal chondrodysplasia Blomstrand Lethal Chondrodysplasia Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Bone Diseases Bone disease Pubtator 11012879, 25354236 Associate
★☆☆☆☆
Found in Text Mining only
Brachycephaly Brachycephaly HPO_DG
★☆☆☆☆
Found in Text Mining only
Brachydactyly Brachydactyly BEFREE 21082660
★☆☆☆☆
Found in Text Mining only
Brachydactyly Brachydactyly HPO_DG
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 21312071, 30151009
★☆☆☆☆
Found in Text Mining only