Gene Gene information from NCBI Gene database.
Entrez ID 57017
Gene name Coenzyme Q9
Gene symbol COQ9
Synonyms (NCBI Gene)
C16orf49COQ10D5
Chromosome 16
Chromosome location 16q21
Summary This locus represents a mitochondrial ubiquinone biosynthesis gene. The encoded protein is likely necessary for biosynthesis of coenzyme Q10, as mutations at this locus have been associated with autosomal-recessive neonatal-onset primary coenzyme Q10 defi
SNPs SNP information provided by dbSNP.
7
SNP ID Visualize variation Clinical significance Consequence
rs11547480 T>G Conflicting-interpretations-of-pathogenicity, uncertain-significance Missense variant, coding sequence variant
rs76508383 G>A Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, missense variant
rs143587648 C>G,T Conflicting-interpretations-of-pathogenicity, likely-benign Coding sequence variant, missense variant
rs267606751 C>T Pathogenic Stop gained, coding sequence variant
rs547254482 T>C Uncertain-significance, conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
298
miRTarBase ID miRNA Experiments Reference
MIRT029756 hsa-miR-26b-5p Microarray 19088304
MIRT904501 hsa-miR-1193 CLIP-seq
MIRT904502 hsa-miR-1197 CLIP-seq
MIRT904503 hsa-miR-1266 CLIP-seq
MIRT904504 hsa-miR-1289 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
23
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 25339443, 27499296, 30661980, 32296183
GO:0005739 Component Mitochondrion HDA 20833797
GO:0005739 Component Mitochondrion HTP 34800366
GO:0005739 Component Mitochondrion IDA 27499296
GO:0005739 Component Mitochondrion IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612837 25302 ENSG00000088682
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75208
Protein name Ubiquinone biosynthesis protein COQ9, mitochondrial
Protein function Membrane-associated protein that warps the membrane surface to access and bind aromatic isoprenes with high specificity, including ubiquinone (CoQ) isoprene intermediates and presents them directly to COQ7, therefore facilitating the COQ7-mediat
PDB 4RHP , 6AWL , 6DEW , 7SSP , 7SSS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08511 COQ9 210 286 COQ9 Domain
Sequence
MAAAAVSGALGRAGWRLLQLRCLPVARCRQALVPRAFHASAVGLRSSDEQKQQPPNSFSQ
QHSETQGAEKPDPESSHSPPRYTDQGGEEEEDYESEEQLQHRILTAALEFVPAHGWTAEA
IAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEEEQKLVQLGQAEKRKTDQ
FLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNW
YTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHT
AKQVKSTGEALVQG
LMGAAVTLKNLTGLNQRR
Sequence length 318
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
18
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Encephalopathy-hypertrophic cardiomyopathy-renal tubular disease syndrome Pathogenic; Likely pathogenic rs2030153941, rs752219939, rs747898678, rs267606751, rs786205897, rs751556970, rs1491334480, rs759658215, rs2543566429, rs368777580 RCV001328538
RCV001780866
RCV001780867
RCV000000459
RCV000172872
View all (5 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Lung cancer Likely pathogenic rs752219939 RCV005922460
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Clear cell carcinoma of kidney Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Coenzyme Q10 deficiency Uncertain significance; Conflicting classifications of pathogenicity ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
COENZYME Q10 DEFICIENCY, PRIMARY, 5 CTD, Disgenet, HPO
CTD, Disgenet, HPO
CTD, Disgenet, HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acidosis Lactic Lactic acidosis Pubtator 26081641 Associate
★☆☆☆☆
Found in Text Mining only
Brain Diseases Brain disease Pubtator 26081641 Associate
★☆☆☆☆
Found in Text Mining only
Cerebellar atrophy Cerebellar atrophy HPO_DG
★☆☆☆☆
Found in Text Mining only
Cerebral atrophy Cerebral Atrophy HPO_DG
★☆☆☆☆
Found in Text Mining only
COENZYME Q10 DEFICIENCY Coenzyme Q10 Deficiency BEFREE 19375058, 23255162, 25091424, 31821167
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
COENZYME Q10 DEFICIENCY Coenzyme Q10 Deficiency GENOMICS_ENGLAND_DG 27604308, 30712880
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
COENZYME Q10 DEFICIENCY, PRIMARY, 1 Coenzyme Q10 deficiency GENOMICS_ENGLAND_DG 19375058
★☆☆☆☆
Found in Text Mining only
COENZYME Q10 DEFICIENCY, PRIMARY, 5 Coenzyme Q10 Deficiency GENOMICS_ENGLAND_DG 11562630, 19375058, 25655951, 26081641, 27604308
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COENZYME Q10 DEFICIENCY, PRIMARY, 5 Coenzyme Q10 Deficiency ORPHANET_DG 19375058
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COENZYME Q10 DEFICIENCY, PRIMARY, 5 Coenzyme Q10 Deficiency CLINVAR_DG 19375058, 20495179, 20689595, 23255162, 25802402, 28736527
★★☆☆☆
Found in Text Mining + Unknown/Other Associations