C15orf39 (chromosome 15 open reading frame 39)

Gene

• Entrez ID: 56905
• Gene name: Chromosome 15 open reading frame 39
• Gene symbol: C15orf39
• Synonyms (NCBI Gene): -
• Chromosome: 15
• Chromosome location: 15q24.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT030533	hsa-miR-24-3p	Microarray	19748357
MIRT047163	hsa-miR-183-5p	CLASH	23622248
MIRT046063	hsa-miR-125b-5p	CLASH	23622248
MIRT040999	hsa-miR-505-3p	CLASH	23622248
MIRT038137	hsa-miR-423-5p	CLASH	23622248
MIRT728133	hsa-miR-15a-5p	HITS-CLIP	22473208
MIRT728131	hsa-miR-15b-5p	HITS-CLIP	22473208
MIRT728130	hsa-miR-16-5p	HITS-CLIP	22473208
MIRT728129	hsa-miR-195-5p	HITS-CLIP	22473208
MIRT834107	hsa-let-7a	CLIP-seq
MIRT834108	hsa-let-7b	CLIP-seq
MIRT834109	hsa-let-7c	CLIP-seq
MIRT834110	hsa-let-7d	CLIP-seq
MIRT834111	hsa-let-7e	CLIP-seq
MIRT834112	hsa-let-7f	CLIP-seq
MIRT834113	hsa-let-7g	CLIP-seq
MIRT834114	hsa-let-7i	CLIP-seq
MIRT834115	hsa-miR-103a	CLIP-seq
MIRT834116	hsa-miR-107	CLIP-seq
MIRT834117	hsa-miR-10a	CLIP-seq
MIRT834118	hsa-miR-10b	CLIP-seq
MIRT834119	hsa-miR-1184	CLIP-seq
MIRT834120	hsa-miR-1202	CLIP-seq
MIRT834121	hsa-miR-1204	CLIP-seq
MIRT834122	hsa-miR-1207-3p	CLIP-seq
MIRT834123	hsa-miR-1251	CLIP-seq
MIRT834124	hsa-miR-1284	CLIP-seq
MIRT834125	hsa-miR-1285	CLIP-seq
MIRT834126	hsa-miR-1294	CLIP-seq
MIRT834127	hsa-miR-1321	CLIP-seq
MIRT834128	hsa-miR-134	CLIP-seq
MIRT834129	hsa-miR-1587	CLIP-seq
MIRT834130	hsa-miR-15a	CLIP-seq
MIRT834131	hsa-miR-15b	CLIP-seq
MIRT834132	hsa-miR-16	CLIP-seq
MIRT834133	hsa-miR-185	CLIP-seq
MIRT834134	hsa-miR-195	CLIP-seq
MIRT834135	hsa-miR-202	CLIP-seq
MIRT834136	hsa-miR-2110	CLIP-seq
MIRT834137	hsa-miR-2117	CLIP-seq
MIRT834138	hsa-miR-214	CLIP-seq
MIRT834139	hsa-miR-24	CLIP-seq
MIRT834140	hsa-miR-2467-3p	CLIP-seq
MIRT834141	hsa-miR-298	CLIP-seq
MIRT834142	hsa-miR-31	CLIP-seq
MIRT834143	hsa-miR-3118	CLIP-seq
MIRT834144	hsa-miR-3150a-3p	CLIP-seq
MIRT834145	hsa-miR-3154	CLIP-seq
MIRT834146	hsa-miR-3162-5p	CLIP-seq
MIRT834147	hsa-miR-3175	CLIP-seq
MIRT834148	hsa-miR-3187-5p	CLIP-seq
MIRT834149	hsa-miR-3194-5p	CLIP-seq
MIRT834150	hsa-miR-3202	CLIP-seq
MIRT834151	hsa-miR-323b-3p	CLIP-seq
MIRT834152	hsa-miR-324-5p	CLIP-seq
MIRT834153	hsa-miR-3616-3p	CLIP-seq
MIRT834154	hsa-miR-3619-5p	CLIP-seq
MIRT834155	hsa-miR-3918	CLIP-seq
MIRT834156	hsa-miR-3924	CLIP-seq
MIRT834157	hsa-miR-3941	CLIP-seq
MIRT834158	hsa-miR-3972	CLIP-seq
MIRT834159	hsa-miR-424	CLIP-seq
MIRT834160	hsa-miR-4257	CLIP-seq
MIRT834161	hsa-miR-4269	CLIP-seq
MIRT834162	hsa-miR-4271	CLIP-seq
MIRT834163	hsa-miR-4273	CLIP-seq
MIRT834164	hsa-miR-4286	CLIP-seq
MIRT834165	hsa-miR-4291	CLIP-seq
MIRT834166	hsa-miR-4306	CLIP-seq
MIRT834167	hsa-miR-4316	CLIP-seq
MIRT834168	hsa-miR-4437	CLIP-seq
MIRT834169	hsa-miR-4458	CLIP-seq
MIRT834170	hsa-miR-4492	CLIP-seq
MIRT834171	hsa-miR-4498	CLIP-seq
MIRT834172	hsa-miR-4500	CLIP-seq
MIRT834173	hsa-miR-4514	CLIP-seq
MIRT834174	hsa-miR-451b	CLIP-seq
MIRT834175	hsa-miR-4532	CLIP-seq
MIRT834176	hsa-miR-4540	CLIP-seq
MIRT834177	hsa-miR-4636	CLIP-seq
MIRT834178	hsa-miR-4643	CLIP-seq
MIRT834179	hsa-miR-4644	CLIP-seq
MIRT834180	hsa-miR-4646-3p	CLIP-seq
MIRT834181	hsa-miR-4656	CLIP-seq
MIRT834182	hsa-miR-466	CLIP-seq
MIRT834183	hsa-miR-4670-3p	CLIP-seq
MIRT834184	hsa-miR-4672	CLIP-seq
MIRT834185	hsa-miR-4675	CLIP-seq
MIRT834186	hsa-miR-4677-3p	CLIP-seq
MIRT834187	hsa-miR-4684-5p	CLIP-seq
MIRT834188	hsa-miR-4685-5p	CLIP-seq
MIRT834189	hsa-miR-4692	CLIP-seq
MIRT834190	hsa-miR-4693-3p	CLIP-seq
MIRT834191	hsa-miR-4717-3p	CLIP-seq
MIRT834192	hsa-miR-4721	CLIP-seq
MIRT834193	hsa-miR-4725-3p	CLIP-seq
MIRT834194	hsa-miR-4726-3p	CLIP-seq
MIRT834195	hsa-miR-4739	CLIP-seq
MIRT834196	hsa-miR-4741	CLIP-seq
MIRT834197	hsa-miR-4742-5p	CLIP-seq
MIRT834198	hsa-miR-4747-5p	CLIP-seq
MIRT834199	hsa-miR-4756-5p	CLIP-seq
MIRT834200	hsa-miR-4789-3p	CLIP-seq
MIRT834201	hsa-miR-4789-5p	CLIP-seq
MIRT834202	hsa-miR-486-3p	CLIP-seq
MIRT834203	hsa-miR-497	CLIP-seq
MIRT834204	hsa-miR-548u	CLIP-seq
MIRT834205	hsa-miR-563	CLIP-seq
MIRT834206	hsa-miR-578	CLIP-seq
MIRT834207	hsa-miR-612	CLIP-seq
MIRT834208	hsa-miR-645	CLIP-seq
MIRT834209	hsa-miR-659	CLIP-seq
MIRT834210	hsa-miR-663b	CLIP-seq
MIRT834211	hsa-miR-761	CLIP-seq
MIRT834212	hsa-miR-762	CLIP-seq
MIRT834213	hsa-miR-9	CLIP-seq
MIRT834214	hsa-miR-922	CLIP-seq
MIRT834215	hsa-miR-939	CLIP-seq
MIRT834216	hsa-miR-98	CLIP-seq
MIRT834107	hsa-let-7a	CLIP-seq
MIRT834108	hsa-let-7b	CLIP-seq
MIRT834109	hsa-let-7c	CLIP-seq
MIRT834110	hsa-let-7d	CLIP-seq
MIRT834111	hsa-let-7e	CLIP-seq
MIRT834112	hsa-let-7f	CLIP-seq
MIRT834113	hsa-let-7g	CLIP-seq
MIRT834114	hsa-let-7i	CLIP-seq
MIRT834115	hsa-miR-103a	CLIP-seq
MIRT834116	hsa-miR-107	CLIP-seq
MIRT834117	hsa-miR-10a	CLIP-seq
MIRT834118	hsa-miR-10b	CLIP-seq
MIRT834119	hsa-miR-1184	CLIP-seq
MIRT1947126	hsa-miR-1266	CLIP-seq
MIRT834126	hsa-miR-1294	CLIP-seq
MIRT1947127	hsa-miR-1343	CLIP-seq
MIRT834135	hsa-miR-202	CLIP-seq
MIRT1947128	hsa-miR-3135b	CLIP-seq
MIRT1947129	hsa-miR-3155	CLIP-seq
MIRT1947130	hsa-miR-3155b	CLIP-seq
MIRT834152	hsa-miR-324-5p	CLIP-seq
MIRT1947131	hsa-miR-3652	CLIP-seq
MIRT1947132	hsa-miR-3919	CLIP-seq
MIRT834157	hsa-miR-3941	CLIP-seq
MIRT834161	hsa-miR-4269	CLIP-seq
MIRT1947133	hsa-miR-4270	CLIP-seq
MIRT834164	hsa-miR-4286	CLIP-seq
MIRT1947134	hsa-miR-4300	CLIP-seq
MIRT834167	hsa-miR-4316	CLIP-seq
MIRT1947135	hsa-miR-4430	CLIP-seq
MIRT1947136	hsa-miR-4441	CLIP-seq
MIRT834169	hsa-miR-4458	CLIP-seq
MIRT1947137	hsa-miR-4469	CLIP-seq
MIRT834172	hsa-miR-4500	CLIP-seq
MIRT834173	hsa-miR-4514	CLIP-seq
MIRT1947138	hsa-miR-4518	CLIP-seq
MIRT834178	hsa-miR-4643	CLIP-seq
MIRT1947139	hsa-miR-4645-5p	CLIP-seq
MIRT834180	hsa-miR-4646-3p	CLIP-seq
MIRT1947140	hsa-miR-4651	CLIP-seq
MIRT834182	hsa-miR-466	CLIP-seq
MIRT834184	hsa-miR-4672	CLIP-seq
MIRT1947141	hsa-miR-4673	CLIP-seq
MIRT834186	hsa-miR-4677-3p	CLIP-seq
MIRT834189	hsa-miR-4692	CLIP-seq
MIRT834194	hsa-miR-4726-3p	CLIP-seq
MIRT834197	hsa-miR-4742-5p	CLIP-seq
MIRT1947142	hsa-miR-4756-3p	CLIP-seq
MIRT834200	hsa-miR-4789-3p	CLIP-seq
MIRT1947143	hsa-miR-484	CLIP-seq
MIRT834206	hsa-miR-578	CLIP-seq
MIRT1947144	hsa-miR-608	CLIP-seq
MIRT1947145	hsa-miR-920	CLIP-seq
MIRT834216	hsa-miR-98	CLIP-seq
MIRT834107	hsa-let-7a	CLIP-seq
MIRT834108	hsa-let-7b	CLIP-seq
MIRT834109	hsa-let-7c	CLIP-seq
MIRT834110	hsa-let-7d	CLIP-seq
MIRT834111	hsa-let-7e	CLIP-seq
MIRT834112	hsa-let-7f	CLIP-seq
MIRT834113	hsa-let-7g	CLIP-seq
MIRT834114	hsa-let-7i	CLIP-seq
MIRT834115	hsa-miR-103a	CLIP-seq
MIRT834116	hsa-miR-107	CLIP-seq
MIRT834117	hsa-miR-10a	CLIP-seq
MIRT834118	hsa-miR-10b	CLIP-seq
MIRT834119	hsa-miR-1184	CLIP-seq
MIRT2185209	hsa-miR-1197	CLIP-seq
MIRT834120	hsa-miR-1202	CLIP-seq
MIRT834121	hsa-miR-1204	CLIP-seq
MIRT834122	hsa-miR-1207-3p	CLIP-seq
MIRT2185210	hsa-miR-1275	CLIP-seq
MIRT834125	hsa-miR-1285	CLIP-seq
MIRT834126	hsa-miR-1294	CLIP-seq
MIRT834127	hsa-miR-1321	CLIP-seq
MIRT834130	hsa-miR-15a	CLIP-seq
MIRT834131	hsa-miR-15b	CLIP-seq
MIRT834132	hsa-miR-16	CLIP-seq
MIRT2185211	hsa-miR-1827	CLIP-seq
MIRT2185212	hsa-miR-1910	CLIP-seq
MIRT834134	hsa-miR-195	CLIP-seq
MIRT834135	hsa-miR-202	CLIP-seq
MIRT834136	hsa-miR-2110	CLIP-seq
MIRT834137	hsa-miR-2117	CLIP-seq
MIRT834138	hsa-miR-214	CLIP-seq
MIRT834139	hsa-miR-24	CLIP-seq
MIRT834140	hsa-miR-2467-3p	CLIP-seq
MIRT2185213	hsa-miR-2964a-5p	CLIP-seq
MIRT834141	hsa-miR-298	CLIP-seq
MIRT2185214	hsa-miR-3127-5p	CLIP-seq
MIRT834145	hsa-miR-3154	CLIP-seq
MIRT834146	hsa-miR-3162-5p	CLIP-seq
MIRT834148	hsa-miR-3187-5p	CLIP-seq
MIRT834149	hsa-miR-3194-5p	CLIP-seq
MIRT834150	hsa-miR-3202	CLIP-seq
MIRT834151	hsa-miR-323b-3p	CLIP-seq
MIRT834152	hsa-miR-324-5p	CLIP-seq
MIRT2185215	hsa-miR-338-3p	CLIP-seq
MIRT2185216	hsa-miR-3612	CLIP-seq
MIRT834153	hsa-miR-3616-3p	CLIP-seq
MIRT834154	hsa-miR-3619-5p	CLIP-seq
MIRT2185217	hsa-miR-365	CLIP-seq
MIRT2185218	hsa-miR-3667-5p	CLIP-seq
MIRT2185219	hsa-miR-3670	CLIP-seq
MIRT2185220	hsa-miR-3691-3p	CLIP-seq
MIRT834156	hsa-miR-3924	CLIP-seq
MIRT834157	hsa-miR-3941	CLIP-seq
MIRT834158	hsa-miR-3972	CLIP-seq
MIRT834159	hsa-miR-424	CLIP-seq
MIRT834160	hsa-miR-4257	CLIP-seq
MIRT2185221	hsa-miR-4264	CLIP-seq
MIRT834161	hsa-miR-4269	CLIP-seq
MIRT1947133	hsa-miR-4270	CLIP-seq
MIRT834162	hsa-miR-4271	CLIP-seq
MIRT834164	hsa-miR-4286	CLIP-seq
MIRT834165	hsa-miR-4291	CLIP-seq
MIRT834167	hsa-miR-4316	CLIP-seq
MIRT834168	hsa-miR-4437	CLIP-seq
MIRT1947136	hsa-miR-4441	CLIP-seq
MIRT2185222	hsa-miR-4447	CLIP-seq
MIRT834169	hsa-miR-4458	CLIP-seq
MIRT2185223	hsa-miR-4472	CLIP-seq
MIRT2185224	hsa-miR-4476	CLIP-seq
MIRT2185225	hsa-miR-4480	CLIP-seq
MIRT834172	hsa-miR-4500	CLIP-seq
MIRT834173	hsa-miR-4514	CLIP-seq
MIRT834174	hsa-miR-451b	CLIP-seq
MIRT2185226	hsa-miR-4525	CLIP-seq
MIRT834175	hsa-miR-4532	CLIP-seq
MIRT834176	hsa-miR-4540	CLIP-seq
MIRT2185227	hsa-miR-455-3p	CLIP-seq
MIRT834177	hsa-miR-4636	CLIP-seq
MIRT834178	hsa-miR-4643	CLIP-seq
MIRT834180	hsa-miR-4646-3p	CLIP-seq
MIRT1947140	hsa-miR-4651	CLIP-seq
MIRT834182	hsa-miR-466	CLIP-seq
MIRT2185228	hsa-miR-4662a-5p	CLIP-seq
MIRT2185229	hsa-miR-4665-5p	CLIP-seq
MIRT834183	hsa-miR-4670-3p	CLIP-seq
MIRT834184	hsa-miR-4672	CLIP-seq
MIRT834186	hsa-miR-4677-3p	CLIP-seq
MIRT834189	hsa-miR-4692	CLIP-seq
MIRT834191	hsa-miR-4717-3p	CLIP-seq
MIRT834192	hsa-miR-4721	CLIP-seq
MIRT2185230	hsa-miR-4723-5p	CLIP-seq
MIRT834193	hsa-miR-4725-3p	CLIP-seq
MIRT834194	hsa-miR-4726-3p	CLIP-seq
MIRT834195	hsa-miR-4739	CLIP-seq
MIRT834197	hsa-miR-4742-5p	CLIP-seq
MIRT834198	hsa-miR-4747-5p	CLIP-seq
MIRT2185231	hsa-miR-4755-3p	CLIP-seq
MIRT834199	hsa-miR-4756-5p	CLIP-seq
MIRT834200	hsa-miR-4789-3p	CLIP-seq
MIRT834202	hsa-miR-486-3p	CLIP-seq
MIRT834203	hsa-miR-497	CLIP-seq
MIRT834204	hsa-miR-548u	CLIP-seq
MIRT834205	hsa-miR-563	CLIP-seq
MIRT834206	hsa-miR-578	CLIP-seq
MIRT1947144	hsa-miR-608	CLIP-seq
MIRT834207	hsa-miR-612	CLIP-seq
MIRT2185232	hsa-miR-625	CLIP-seq
MIRT2185233	hsa-miR-650	CLIP-seq
MIRT834209	hsa-miR-659	CLIP-seq
MIRT834210	hsa-miR-663b	CLIP-seq
MIRT834211	hsa-miR-761	CLIP-seq
MIRT834213	hsa-miR-9	CLIP-seq
MIRT834214	hsa-miR-922	CLIP-seq
MIRT834215	hsa-miR-939	CLIP-seq
MIRT834216	hsa-miR-98	CLIP-seq
MIRT834107	hsa-let-7a	CLIP-seq
MIRT834108	hsa-let-7b	CLIP-seq
MIRT834109	hsa-let-7c	CLIP-seq
MIRT834110	hsa-let-7d	CLIP-seq
MIRT834111	hsa-let-7e	CLIP-seq
MIRT834112	hsa-let-7f	CLIP-seq
MIRT834113	hsa-let-7g	CLIP-seq
MIRT834114	hsa-let-7i	CLIP-seq
MIRT834117	hsa-miR-10a	CLIP-seq
MIRT834118	hsa-miR-10b	CLIP-seq
MIRT834126	hsa-miR-1294	CLIP-seq
MIRT834135	hsa-miR-202	CLIP-seq
MIRT834167	hsa-miR-4316	CLIP-seq
MIRT834169	hsa-miR-4458	CLIP-seq
MIRT834172	hsa-miR-4500	CLIP-seq
MIRT1947140	hsa-miR-4651	CLIP-seq
MIRT834186	hsa-miR-4677-3p	CLIP-seq
MIRT1947144	hsa-miR-608	CLIP-seq
MIRT834216	hsa-miR-98	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	38892217
GO:0005634	Component	Nucleus	IDA	38892217
GO:0005737	Component	Cytoplasm	IDA	38892217
GO:0005829	Component	Cytosol	IDA
GO:0043124	Process	Negative regulation of canonical NF-kappaB signal transduction	IMP	38892217
GO:0050728	Process	Negative regulation of inflammatory response	IMP	38892217

Other IDs

• MIM: 621142
• HGNC: 24497
• e!Ensembl: ENSG00000167173

Protein

• UniProt ID: Q6ZRI6
• Protein name: Uncharacterized protein C15orf39
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF17663	DUF5525	1 → 1047	Family of unknown function (DUF5525)	Family

• Sequence:

  MAEKRPLRTLGPVMYGKLPRLETDSGLEHSLPHSVGNQDPCTYKGSYFSCPMAGTPKAES
  EQLASWTPYPPLYSTGMAGPPLQADNLLTNCLFYRSPAEGPEKMQDSSPVELLPFSPQAH
  SYPGPPLAAPKPVYRNPLCYGLSTCLGEGAVKRPLDVDWTLATGPLLPSADPPCSLAPAP
  SKGQTLDGTFLRGVPAEGSSKDSSGSFSPCQPFLEKYQTIHSTGFLASRYTGPYPRNSKQ
  AMSEGPSSPWTQLAQPLGPPCQDTGPTHYPPPHHPPPHPPQALPCPPACRHPEKQGSYSP
  ALPLQPLGGHKGTGYQAGGLGSPYLRQQAAQAPYIPPLGLDAYPYPSAPLPAPSPGLKLE
  PPLTPRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPPSQNNVRAVPQPGAFQRACQPL
  PASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPIVIRDSPVPCTPPALPPCA
  RECQSLPQKEGARPPSSPPMPVIDNVFSLAPYRDYLDVPAPEATTEPDSATAEPDSAPAT
  SEGQDKGCRGTLPAQEGPSGSKPLRGSLKEEVALDLSVRKPTAEASPVKASRSVEHAKPT
  AAMDVPDVGNMVSDLPGLKKIDTEAPGLPGVPVTTDAMPRTNFHSSVAFMFRKFKILRPA
  PLPAAVVPSTPTSAPAPTQPAPTPTSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASPA
  PAPAPSPAPARAQAPASARDPAPAPAPVAGPAPASTSAPGDSLEQHFTGLHASLCDAISG
  SVAHSPPEKLREWLETAGPWGQAAWQDCQGVQGLLAKLLSQLQRFDRTHRCPFPHVVRAG
  AIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERALRELALPGCTSRMLKLL
  ALRQLPDIYPDLLGLQWRDCVRRQLGDFDTEAGAVSSSEPTVARGEPESLALAQKSPAPK
  VRKPGRKPPTPGPEKAEAAAGEESCGASPTPATSASPPGPTLKARFRSLLETAWLNGLAL
  PTWGHKSSRPDQPSPCPQLLDSQSHHL

• Sequence length: 1047

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
LUNG CARCINOMA	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations