Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	55635
Gene name	DEP domain containing 1
Gene symbol	DEPDC1
Synonyms (NCBI Gene)	DEP.8DEPDC1-V2DEPDC1ASDP35
Chromosome	1
Chromosome location	1p31.3

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miRTarBase ID	miRNA	Experiments	Reference
MIRT019599	hsa-miR-340-5p	Sequencing	20371350
MIRT021182	hsa-miR-186-5p	Sequencing	20371350
MIRT002615	hsa-miR-124-3p	Microarray	15685193
MIRT002615	hsa-miR-124-3p	Microarray	18668037
MIRT024325	hsa-miR-215-5p	Microarray	19074876
MIRT026487	hsa-miR-192-5p	Microarray	19074876
MIRT050884	hsa-miR-17-5p	CLASH	23622248
MIRT050372	hsa-miR-24-3p	CLASH	23622248
MIRT043344	hsa-miR-331-3p	CLASH	23622248
MIRT195885	hsa-miR-4282	HITS-CLIP	21572407
MIRT116027	hsa-miR-5692a	HITS-CLIP	21572407
MIRT195883	hsa-miR-590-3p	HITS-CLIP	21572407
MIRT507563	hsa-miR-3163	HITS-CLIP	21572407
MIRT507564	hsa-miR-8063	HITS-CLIP	21572407
MIRT507562	hsa-miR-4698	HITS-CLIP	21572407
MIRT116036	hsa-miR-5697	HITS-CLIP	21572407
MIRT507561	hsa-miR-585-5p	HITS-CLIP	21572407
MIRT507560	hsa-miR-5682	HITS-CLIP	21572407
MIRT507559	hsa-miR-1297	HITS-CLIP	21572407
MIRT507558	hsa-miR-26a-5p	HITS-CLIP	21572407
MIRT507557	hsa-miR-26b-5p	HITS-CLIP	21572407
MIRT507556	hsa-miR-4465	HITS-CLIP	21572407
MIRT507555	hsa-miR-374b-3p	HITS-CLIP	21572407
MIRT507554	hsa-miR-607	HITS-CLIP	21572407
MIRT507553	hsa-miR-1305	HITS-CLIP	21572407
MIRT195885	hsa-miR-4282	PAR-CLIP	20371350
MIRT116027	hsa-miR-5692a	PAR-CLIP	20371350
MIRT195883	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT507563	hsa-miR-3163	PAR-CLIP	20371350
MIRT507564	hsa-miR-8063	PAR-CLIP	20371350
MIRT507562	hsa-miR-4698	PAR-CLIP	20371350
MIRT116036	hsa-miR-5697	PAR-CLIP	20371350
MIRT507561	hsa-miR-585-5p	PAR-CLIP	20371350
MIRT507560	hsa-miR-5682	PAR-CLIP	20371350
MIRT507559	hsa-miR-1297	PAR-CLIP	20371350
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	20371350
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	20371350
MIRT507556	hsa-miR-4465	PAR-CLIP	20371350
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	20371350
MIRT507554	hsa-miR-607	PAR-CLIP	20371350
MIRT507553	hsa-miR-1305	PAR-CLIP	20371350
MIRT195885	hsa-miR-4282	PAR-CLIP	20371350
MIRT116027	hsa-miR-5692a	PAR-CLIP	20371350
MIRT195883	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT507563	hsa-miR-3163	PAR-CLIP	20371350
MIRT507564	hsa-miR-8063	PAR-CLIP	20371350
MIRT507562	hsa-miR-4698	PAR-CLIP	20371350
MIRT116036	hsa-miR-5697	PAR-CLIP	20371350
MIRT507561	hsa-miR-585-5p	PAR-CLIP	20371350
MIRT507560	hsa-miR-5682	PAR-CLIP	20371350
MIRT507559	hsa-miR-1297	PAR-CLIP	20371350
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	20371350
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	20371350
MIRT507556	hsa-miR-4465	PAR-CLIP	20371350
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	20371350
MIRT507554	hsa-miR-607	PAR-CLIP	20371350
MIRT507553	hsa-miR-1305	PAR-CLIP	20371350
MIRT195885	hsa-miR-4282	PAR-CLIP	21572407
MIRT116027	hsa-miR-5692a	PAR-CLIP	21572407
MIRT195883	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT507563	hsa-miR-3163	PAR-CLIP	21572407
MIRT507564	hsa-miR-8063	PAR-CLIP	21572407
MIRT507562	hsa-miR-4698	PAR-CLIP	21572407
MIRT116036	hsa-miR-5697	PAR-CLIP	21572407
MIRT507561	hsa-miR-585-5p	PAR-CLIP	21572407
MIRT507560	hsa-miR-5682	PAR-CLIP	21572407
MIRT507559	hsa-miR-1297	PAR-CLIP	21572407
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT507556	hsa-miR-4465	PAR-CLIP	21572407
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	21572407
MIRT507554	hsa-miR-607	PAR-CLIP	21572407
MIRT507553	hsa-miR-1305	PAR-CLIP	21572407
MIRT558417	hsa-miR-3666	PAR-CLIP	21572407
MIRT558416	hsa-miR-301b-3p	PAR-CLIP	21572407
MIRT558414	hsa-miR-301a-3p	PAR-CLIP	21572407
MIRT558415	hsa-miR-454-3p	PAR-CLIP	21572407
MIRT558413	hsa-miR-4295	PAR-CLIP	21572407
MIRT558412	hsa-miR-130b-3p	PAR-CLIP	21572407
MIRT558411	hsa-miR-130a-3p	PAR-CLIP	21572407
MIRT558410	hsa-miR-3646	PAR-CLIP	21572407
MIRT558409	hsa-miR-495-5p	PAR-CLIP	21572407
MIRT558408	hsa-miR-323a-3p	PAR-CLIP	21572407
MIRT558407	hsa-miR-6747-3p	PAR-CLIP	21572407
MIRT116035	hsa-miR-4763-5p	PAR-CLIP	21572407
MIRT558406	hsa-miR-19a-3p	PAR-CLIP	21572407
MIRT558405	hsa-miR-19b-3p	PAR-CLIP	21572407
MIRT558404	hsa-miR-4423-5p	PAR-CLIP	21572407
MIRT558403	hsa-miR-4671-3p	PAR-CLIP	21572407
MIRT558402	hsa-miR-4473	PAR-CLIP	21572407
MIRT116039	hsa-miR-6894-3p	PAR-CLIP	21572407
MIRT558400	hsa-miR-6514-3p	PAR-CLIP	21572407
MIRT558401	hsa-miR-493-5p	PAR-CLIP	21572407
MIRT195885	hsa-miR-4282	PAR-CLIP	21572407
MIRT116027	hsa-miR-5692a	PAR-CLIP	21572407
MIRT195883	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT507563	hsa-miR-3163	PAR-CLIP	21572407
MIRT507564	hsa-miR-8063	PAR-CLIP	21572407
MIRT507562	hsa-miR-4698	PAR-CLIP	21572407
MIRT116036	hsa-miR-5697	PAR-CLIP	21572407
MIRT507561	hsa-miR-585-5p	PAR-CLIP	21572407
MIRT507560	hsa-miR-5682	PAR-CLIP	21572407
MIRT507559	hsa-miR-1297	PAR-CLIP	21572407
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT507556	hsa-miR-4465	PAR-CLIP	21572407
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	21572407
MIRT507554	hsa-miR-607	PAR-CLIP	21572407
MIRT507553	hsa-miR-1305	PAR-CLIP	21572407
MIRT538095	hsa-miR-3159	PAR-CLIP	22012620
MIRT538096	hsa-miR-6715a-3p	PAR-CLIP	22012620
MIRT538093	hsa-miR-6715b-3p	PAR-CLIP	22012620
MIRT195885	hsa-miR-4282	PAR-CLIP	23446348
MIRT116027	hsa-miR-5692a	PAR-CLIP	23446348
MIRT195883	hsa-miR-590-3p	PAR-CLIP	23446348
MIRT507563	hsa-miR-3163	PAR-CLIP	23446348
MIRT507564	hsa-miR-8063	PAR-CLIP	23446348
MIRT507562	hsa-miR-4698	PAR-CLIP	23446348
MIRT116036	hsa-miR-5697	PAR-CLIP	23446348
MIRT507561	hsa-miR-585-5p	PAR-CLIP	23446348
MIRT507560	hsa-miR-5682	PAR-CLIP	23446348
MIRT507559	hsa-miR-1297	PAR-CLIP	23446348
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	23446348
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	23446348
MIRT507556	hsa-miR-4465	PAR-CLIP	23446348
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	23446348
MIRT507554	hsa-miR-607	PAR-CLIP	23446348
MIRT507553	hsa-miR-1305	PAR-CLIP	23446348
MIRT440827	hsa-miR-142-3p	HITS-CLIP	22473208
MIRT440827	hsa-miR-142-3p	HITS-CLIP	22473208
MIRT195885	hsa-miR-4282	HITS-CLIP	21572407
MIRT116027	hsa-miR-5692a	HITS-CLIP	21572407
MIRT195883	hsa-miR-590-3p	HITS-CLIP	21572407
MIRT507563	hsa-miR-3163	HITS-CLIP	21572407
MIRT507564	hsa-miR-8063	HITS-CLIP	21572407
MIRT507562	hsa-miR-4698	HITS-CLIP	21572407
MIRT116036	hsa-miR-5697	HITS-CLIP	21572407
MIRT507561	hsa-miR-585-5p	HITS-CLIP	21572407
MIRT507560	hsa-miR-5682	HITS-CLIP	21572407
MIRT507559	hsa-miR-1297	HITS-CLIP	21572407
MIRT507558	hsa-miR-26a-5p	HITS-CLIP	21572407
MIRT507557	hsa-miR-26b-5p	HITS-CLIP	21572407
MIRT507556	hsa-miR-4465	HITS-CLIP	21572407
MIRT507555	hsa-miR-374b-3p	HITS-CLIP	21572407
MIRT507554	hsa-miR-607	HITS-CLIP	21572407
MIRT507553	hsa-miR-1305	HITS-CLIP	21572407
MIRT195885	hsa-miR-4282	PAR-CLIP	20371350
MIRT116027	hsa-miR-5692a	PAR-CLIP	20371350
MIRT195883	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT507563	hsa-miR-3163	PAR-CLIP	20371350
MIRT507564	hsa-miR-8063	PAR-CLIP	20371350
MIRT507562	hsa-miR-4698	PAR-CLIP	20371350
MIRT116036	hsa-miR-5697	PAR-CLIP	20371350
MIRT507561	hsa-miR-585-5p	PAR-CLIP	20371350
MIRT507560	hsa-miR-5682	PAR-CLIP	20371350
MIRT507559	hsa-miR-1297	PAR-CLIP	20371350
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	20371350
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	20371350
MIRT507556	hsa-miR-4465	PAR-CLIP	20371350
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	20371350
MIRT507554	hsa-miR-607	PAR-CLIP	20371350
MIRT507553	hsa-miR-1305	PAR-CLIP	20371350
MIRT195885	hsa-miR-4282	PAR-CLIP	20371350
MIRT116027	hsa-miR-5692a	PAR-CLIP	20371350
MIRT195883	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT507563	hsa-miR-3163	PAR-CLIP	20371350
MIRT507564	hsa-miR-8063	PAR-CLIP	20371350
MIRT507562	hsa-miR-4698	PAR-CLIP	20371350
MIRT116036	hsa-miR-5697	PAR-CLIP	20371350
MIRT507561	hsa-miR-585-5p	PAR-CLIP	20371350
MIRT507560	hsa-miR-5682	PAR-CLIP	20371350
MIRT507559	hsa-miR-1297	PAR-CLIP	20371350
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	20371350
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	20371350
MIRT507556	hsa-miR-4465	PAR-CLIP	20371350
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	20371350
MIRT507554	hsa-miR-607	PAR-CLIP	20371350
MIRT507553	hsa-miR-1305	PAR-CLIP	20371350
MIRT195885	hsa-miR-4282	PAR-CLIP	21572407
MIRT116027	hsa-miR-5692a	PAR-CLIP	21572407
MIRT195883	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT507563	hsa-miR-3163	PAR-CLIP	21572407
MIRT507564	hsa-miR-8063	PAR-CLIP	21572407
MIRT507562	hsa-miR-4698	PAR-CLIP	21572407
MIRT116036	hsa-miR-5697	PAR-CLIP	21572407
MIRT507561	hsa-miR-585-5p	PAR-CLIP	21572407
MIRT507560	hsa-miR-5682	PAR-CLIP	21572407
MIRT507559	hsa-miR-1297	PAR-CLIP	21572407
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT507556	hsa-miR-4465	PAR-CLIP	21572407
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	21572407
MIRT507554	hsa-miR-607	PAR-CLIP	21572407
MIRT507553	hsa-miR-1305	PAR-CLIP	21572407
MIRT558417	hsa-miR-3666	PAR-CLIP	21572407
MIRT558416	hsa-miR-301b-3p	PAR-CLIP	21572407
MIRT558414	hsa-miR-301a-3p	PAR-CLIP	21572407
MIRT558415	hsa-miR-454-3p	PAR-CLIP	21572407
MIRT558413	hsa-miR-4295	PAR-CLIP	21572407
MIRT558412	hsa-miR-130b-3p	PAR-CLIP	21572407
MIRT558411	hsa-miR-130a-3p	PAR-CLIP	21572407
MIRT558410	hsa-miR-3646	PAR-CLIP	21572407
MIRT558409	hsa-miR-495-5p	PAR-CLIP	21572407
MIRT558408	hsa-miR-323a-3p	PAR-CLIP	21572407
MIRT558407	hsa-miR-6747-3p	PAR-CLIP	21572407
MIRT116035	hsa-miR-4763-5p	PAR-CLIP	21572407
MIRT558406	hsa-miR-19a-3p	PAR-CLIP	21572407
MIRT558405	hsa-miR-19b-3p	PAR-CLIP	21572407
MIRT558404	hsa-miR-4423-5p	PAR-CLIP	21572407
MIRT558403	hsa-miR-4671-3p	PAR-CLIP	21572407
MIRT558402	hsa-miR-4473	PAR-CLIP	21572407
MIRT116039	hsa-miR-6894-3p	PAR-CLIP	21572407
MIRT558400	hsa-miR-6514-3p	PAR-CLIP	21572407
MIRT558401	hsa-miR-493-5p	PAR-CLIP	21572407
MIRT195885	hsa-miR-4282	PAR-CLIP	21572407
MIRT116027	hsa-miR-5692a	PAR-CLIP	21572407
MIRT195883	hsa-miR-590-3p	PAR-CLIP	21572407
MIRT507563	hsa-miR-3163	PAR-CLIP	21572407
MIRT507564	hsa-miR-8063	PAR-CLIP	21572407
MIRT507562	hsa-miR-4698	PAR-CLIP	21572407
MIRT116036	hsa-miR-5697	PAR-CLIP	21572407
MIRT507561	hsa-miR-585-5p	PAR-CLIP	21572407
MIRT507560	hsa-miR-5682	PAR-CLIP	21572407
MIRT507559	hsa-miR-1297	PAR-CLIP	21572407
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT507556	hsa-miR-4465	PAR-CLIP	21572407
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	21572407
MIRT507554	hsa-miR-607	PAR-CLIP	21572407
MIRT507553	hsa-miR-1305	PAR-CLIP	21572407
MIRT538095	hsa-miR-3159	PAR-CLIP	22012620
MIRT538096	hsa-miR-6715a-3p	PAR-CLIP	22012620
MIRT538093	hsa-miR-6715b-3p	PAR-CLIP	22012620
MIRT195885	hsa-miR-4282	PAR-CLIP	23446348
MIRT116027	hsa-miR-5692a	PAR-CLIP	23446348
MIRT195883	hsa-miR-590-3p	PAR-CLIP	23446348
MIRT507563	hsa-miR-3163	PAR-CLIP	23446348
MIRT507564	hsa-miR-8063	PAR-CLIP	23446348
MIRT507562	hsa-miR-4698	PAR-CLIP	23446348
MIRT116036	hsa-miR-5697	PAR-CLIP	23446348
MIRT507561	hsa-miR-585-5p	PAR-CLIP	23446348
MIRT507560	hsa-miR-5682	PAR-CLIP	23446348
MIRT507559	hsa-miR-1297	PAR-CLIP	23446348
MIRT507558	hsa-miR-26a-5p	PAR-CLIP	23446348
MIRT507557	hsa-miR-26b-5p	PAR-CLIP	23446348
MIRT507556	hsa-miR-4465	PAR-CLIP	23446348
MIRT507555	hsa-miR-374b-3p	PAR-CLIP	23446348
MIRT507554	hsa-miR-607	PAR-CLIP	23446348
MIRT507553	hsa-miR-1305	PAR-CLIP	23446348
MIRT932874	hsa-miR-130a	CLIP-seq
MIRT932875	hsa-miR-130b	CLIP-seq
MIRT932876	hsa-miR-19a	CLIP-seq
MIRT932877	hsa-miR-19b	CLIP-seq
MIRT932878	hsa-miR-2054	CLIP-seq
MIRT932879	hsa-miR-216a	CLIP-seq
MIRT932880	hsa-miR-216b	CLIP-seq
MIRT932881	hsa-miR-23a	CLIP-seq
MIRT932882	hsa-miR-23b	CLIP-seq
MIRT932883	hsa-miR-23c	CLIP-seq
MIRT932884	hsa-miR-301a	CLIP-seq
MIRT932885	hsa-miR-301b	CLIP-seq
MIRT932886	hsa-miR-3119	CLIP-seq
MIRT932887	hsa-miR-3161	CLIP-seq
MIRT932888	hsa-miR-323-3p	CLIP-seq
MIRT932889	hsa-miR-342-3p	CLIP-seq
MIRT932890	hsa-miR-377	CLIP-seq
MIRT932891	hsa-miR-454	CLIP-seq
MIRT932892	hsa-miR-4643	CLIP-seq
MIRT932893	hsa-miR-466	CLIP-seq
MIRT932894	hsa-miR-4768-5p	CLIP-seq
MIRT932895	hsa-miR-4789-3p	CLIP-seq
MIRT932896	hsa-miR-4789-5p	CLIP-seq
MIRT932897	hsa-miR-5096	CLIP-seq
MIRT932898	hsa-miR-548ac	CLIP-seq
MIRT932899	hsa-miR-548ae	CLIP-seq
MIRT932900	hsa-miR-548aj	CLIP-seq
MIRT932901	hsa-miR-548am	CLIP-seq
MIRT932902	hsa-miR-548d-3p	CLIP-seq
MIRT932903	hsa-miR-548x	CLIP-seq
MIRT932904	hsa-miR-548z	CLIP-seq
MIRT932905	hsa-miR-124	CLIP-seq
MIRT932906	hsa-miR-141	CLIP-seq
MIRT932907	hsa-miR-196a	CLIP-seq
MIRT932908	hsa-miR-196b	CLIP-seq
MIRT932909	hsa-miR-200a	CLIP-seq
MIRT932878	hsa-miR-2054	CLIP-seq
MIRT932910	hsa-miR-2110	CLIP-seq
MIRT932879	hsa-miR-216a	CLIP-seq
MIRT932880	hsa-miR-216b	CLIP-seq
MIRT932881	hsa-miR-23a	CLIP-seq
MIRT932882	hsa-miR-23b	CLIP-seq
MIRT932883	hsa-miR-23c	CLIP-seq
MIRT932911	hsa-miR-26a	CLIP-seq
MIRT932912	hsa-miR-26b	CLIP-seq
MIRT932913	hsa-miR-3150a-3p	CLIP-seq
MIRT932887	hsa-miR-3161	CLIP-seq
MIRT932914	hsa-miR-331-5p	CLIP-seq
MIRT932889	hsa-miR-342-3p	CLIP-seq
MIRT932915	hsa-miR-3692	CLIP-seq
MIRT932916	hsa-miR-370	CLIP-seq
MIRT932917	hsa-miR-3714	CLIP-seq
MIRT932918	hsa-miR-3910	CLIP-seq
MIRT932919	hsa-miR-3927	CLIP-seq
MIRT932920	hsa-miR-3935	CLIP-seq
MIRT932921	hsa-miR-3973	CLIP-seq
MIRT932922	hsa-miR-4328	CLIP-seq
MIRT932923	hsa-miR-4450	CLIP-seq
MIRT932924	hsa-miR-4477b	CLIP-seq
MIRT932925	hsa-miR-4501	CLIP-seq
MIRT932892	hsa-miR-4643	CLIP-seq
MIRT932893	hsa-miR-466	CLIP-seq
MIRT932926	hsa-miR-4666-5p	CLIP-seq
MIRT932927	hsa-miR-4729	CLIP-seq
MIRT932928	hsa-miR-4760-3p	CLIP-seq
MIRT932929	hsa-miR-4762-5p	CLIP-seq
MIRT932895	hsa-miR-4789-3p	CLIP-seq
MIRT932896	hsa-miR-4789-5p	CLIP-seq
MIRT932930	hsa-miR-506	CLIP-seq
MIRT932931	hsa-miR-520g	CLIP-seq
MIRT932932	hsa-miR-520h	CLIP-seq
MIRT932933	hsa-miR-548aa	CLIP-seq
MIRT932898	hsa-miR-548ac	CLIP-seq
MIRT932899	hsa-miR-548ae	CLIP-seq
MIRT932900	hsa-miR-548aj	CLIP-seq
MIRT932901	hsa-miR-548am	CLIP-seq
MIRT932902	hsa-miR-548d-3p	CLIP-seq
MIRT932903	hsa-miR-548x	CLIP-seq
MIRT932904	hsa-miR-548z	CLIP-seq
MIRT932934	hsa-miR-579	CLIP-seq
MIRT932935	hsa-miR-586	CLIP-seq
MIRT932936	hsa-miR-935	CLIP-seq
MIRT932881	hsa-miR-23a	CLIP-seq
MIRT932882	hsa-miR-23b	CLIP-seq
MIRT932883	hsa-miR-23c	CLIP-seq
MIRT1921986	hsa-miR-3671	CLIP-seq
MIRT1921987	hsa-miR-412	CLIP-seq
MIRT932881	hsa-miR-23a	CLIP-seq
MIRT932882	hsa-miR-23b	CLIP-seq
MIRT932883	hsa-miR-23c	CLIP-seq
MIRT932911	hsa-miR-26a	CLIP-seq
MIRT932912	hsa-miR-26b	CLIP-seq
MIRT932927	hsa-miR-4729	CLIP-seq
MIRT1976221	hsa-miR-3123	CLIP-seq
MIRT1976222	hsa-miR-3925-5p	CLIP-seq
MIRT1976223	hsa-miR-3976	CLIP-seq
MIRT1976224	hsa-miR-4639-5p	CLIP-seq
MIRT2211623	hsa-miR-1303	CLIP-seq
MIRT932911	hsa-miR-26a	CLIP-seq
MIRT932912	hsa-miR-26b	CLIP-seq
MIRT1976221	hsa-miR-3123	CLIP-seq
MIRT2211624	hsa-miR-3132	CLIP-seq
MIRT1976222	hsa-miR-3925-5p	CLIP-seq
MIRT2211625	hsa-miR-4255	CLIP-seq
MIRT2211626	hsa-miR-4276	CLIP-seq
MIRT2211627	hsa-miR-4283	CLIP-seq
MIRT2211628	hsa-miR-4489	CLIP-seq
MIRT2211629	hsa-miR-4670-3p	CLIP-seq

Show/Hide all (9)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005096	Function	GTPase activator activity	IEA
GO:0005515	Function	Protein binding	IPI	20587513
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	20587513
GO:0005634	Component	Nucleus	IEA
GO:0017053	Component	Transcription repressor complex	IBA
GO:0017053	Component	Transcription repressor complex	IDA	20587513
GO:0035556	Process	Intracellular signal transduction	IEA
GO:0045892	Process	Negative regulation of DNA-templated transcription	IDA	20587513

MIM	HGNC	e!Ensembl
612002	22949	ENSG00000024526

Q5TB30

Protein name

DEP domain-containing protein 1A

Protein function

May be involved in transcriptional regulation as a transcriptional corepressor. The DEPDC1A-ZNF224 complex may play a critical role in bladder carcinogenesis by repressing the transcription of the A20 gene, leading to transport of NF-KB protein

PDB

2YSR

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00610	DEP	27 → 106	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain

Tissue specificity

TISSUE SPECIFICITY: Expressed in testis. Up-regulated in bladder cancer cells (at protein level). {ECO:0000269|PubMed:17452976}.

Sequence

MESQGVPPGPYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNN
SNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWGSENVDDNNQLFRFPATSPLKTLPRRYP
ELRKNNIENFSKDKDSIFKLRNLSRRTPKRHGLHLSQENGEKIKHEIINEDQENAIDNRE
LSQEDVEEVWRYVILIYLQTILGVPSLEEVINPKQVIPQYIMYNMANTSKRGVVILQNKS
DDLPHWVLSAMKCLANWPRSNDMNNPTYVGFERDVFRTIADYFLDLPEPLLTFEYYELFV
NILVVCGYITVSDRSSGIHKIQDDPQSSKFLHLNNLNSFKSTECLLLSLLHREKNKEESD
STERLQISNPGFQERCAKKMQLVNLRNRRVSANDIMGGSCHNLIGLSNMHDLSSNSKPRC
CSLEGIVDVPGNSSKEASSVFHQSFPNIEGQNNKLFLESKPKQEFLLNLHSEENIQKPFS
AGFKRTSTLTVQDQEELCNGKCKSKQLCRSQSLLLRSSTRRNSYINTPVAEIIMKPNVGQ
GSTSVQTAMESELGESSATINKRLCKSTIELSENSLLPASSMLTGTQSLLQPHLERVAID
ALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDMPKLHDAMGTRSLMIHTFSRCVLCCAEE
VDLDELLAGRLVSFLMDHHQEILQVPSYLQTAVEKHLDYLKKGHIENPGDGLFAPLPTYS
YCKQISAQEFDEQKVSTSQAAIAELLENIIKNRSLPLKEKRKKLKQFQKEYPLIYQKRFP
TTESEAALFGDKPTIKQPMLILRKPKFRSLR

Sequence length

811

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (3)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Aganglionic megacolon	Uncertain significance	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CARCINOMA, HEPATOCELLULAR	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HIRSCHSPRUNG DISEASE	—	Disgenet	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (42)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Adenocarcinoma of lung (disorder)	Lung adenocarcinoma	BEFREE	28979136		★★★★★ ★☆☆☆☆ Found in Text Mining only
Bladder Neoplasm	Bladder Neoplasm	BEFREE	20587513, 24386437, 28969015, 29632734, 29963168, 29971464		★★★★★ ★☆☆☆☆ Found in Text Mining only
Brain Neoplasms	Brain Neoplasms	BEFREE	28555424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Breast Carcinoma	Breast Carcinoma	BEFREE	31032225, 31162714		★★★★★ ★☆☆☆☆ Found in Text Mining only
Breast Neoplasms	Breast neoplasm	Pubtator	31162714, 34172056	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinogenesis	Carcinogenesis	Pubtator	25902835, 33140894, 33361586	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Hepatocellular	Hepatocellular carcinoma	Pubtator	25605201, 31322256, 34556750, 36785674	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma of bladder	Bladder carcinoma	BEFREE	20587513, 24386437, 28969015, 29632734, 29963168, 29971464		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma of lung	Lung carcinoma	BEFREE	28979136		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Renal Cell	Renal cell carcinoma	Pubtator	33287763	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma, Endometrioid	Endometrioid cancer	BEFREE	26970279		★★★★★ ★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	33140894	Stimulate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	36309731	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
ECTRODACTYLY, ECTODERMAL DYSPLASIA, AND CLEFT LIP/PALATE SYNDROME 1	Ectrodactyly	BEFREE	26970279		★★★★★ ★☆☆☆☆ Found in Text Mining only
Esophageal Neoplasms	Esophageal neoplasm	Pubtator	32500232	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	BEFREE	28555424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Liver carcinoma	Liver carcinoma	BEFREE	25605201, 30417471, 31189746, 31322256, 31366540		★★★★★ ★☆☆☆☆ Found in Text Mining only
Liver carcinoma	Liver carcinoma	CTD_human_DG	28284560		★★★★★ ★☆☆☆☆ Found in Text Mining only
Lupus Erythematosus Systemic	Systemic lupus erythematosus	Pubtator	37072474	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Lymphatic Metastasis	Lymphatic metastasis	Pubtator	36768316	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Glioma	Glioma	BEFREE	28555424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of breast	Breast Cancer	BEFREE	31032225, 31162714		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of liver	Liver Cancer	BEFREE	29963168		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of lung	Lung Cancer	BEFREE	28979136		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	BEFREE	28634077		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of urinary bladder	Urinary bladder cancer	BEFREE	17452976, 20587513, 24386437, 28969015, 29632734, 29963168, 29971464		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	17452976, 28555424, 28634077, 28919988, 30417471, 31032225, 31189746		★★★★★ ★☆☆☆☆ Found in Text Mining only
Multiple Myeloma	Multiple myeloma	BEFREE	23646139		★★★★★ ★☆☆☆☆ Found in Text Mining only
Multiple Myeloma	Multiple myeloma	Pubtator	23646139	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Nasopharyngeal carcinoma	Nasopharyngeal Carcinoma	BEFREE	28969015		★★★★★ ★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	25605201, 28634077, 28969015, 30419349, 31032225, 31189746, 31366540		★★★★★ ★☆☆☆☆ Found in Text Mining only
Noninfiltrating Intraductal Carcinoma	Ductal carcinoma	BEFREE	21314937		★★★★★ ★☆☆☆☆ Found in Text Mining only
Osteosarcoma	Osteosarcoma	Pubtator	36479633, 36849972	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	BEFREE	28634077		★★★★★ ★☆☆☆☆ Found in Text Mining only
Sarcoma	Sarcoma	BEFREE	29297565		★★★★★ ★☆☆☆☆ Found in Text Mining only
Squamous Cell Carcinoma of Head and Neck	Squamous cell carcinoma	Pubtator	32228488, 36768316	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Stomach Neoplasms	Stomach neoplasms	Pubtator	33361586, 35466755	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Triple Negative Breast Neoplasms	Triple Negative Breast Neoplasms	BEFREE	28919988, 30419349		★★★★★ ★☆☆☆☆ Found in Text Mining only
Triple Negative Breast Neoplasms	Triple negative breast cancer	Pubtator	35466755, 40179432	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Urothelial Carcinoma	Urothelial Carcinoma	BEFREE	27998971		★★★★★ ★☆☆☆☆ Found in Text Mining only
Wilms Tumor	Wilms tumor	Pubtator	32149111, 37955537	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Wilms Tumor	Wilms tumor	Pubtator	35795985	Stimulate	★★★★★ ★☆☆☆☆ Found in Text Mining only

DEPDC1 (DEP domain containing 1)