Gene Gene information from NCBI Gene database.
Entrez ID 55165
Gene name Centrosomal protein 55
Gene symbol CEP55
Synonyms (NCBI Gene)
C10orf3CT111MARCHURCC6
Chromosome 10
Chromosome location 10q23.33
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs141458677 C>T Pathogenic 5 prime UTR variant, stop gained, coding sequence variant
rs201430235 C>A Pathogenic Coding sequence variant, stop gained
rs1002854345 T>A,C Likely-pathogenic Splice donor variant
rs1169095680 ->A Pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
446
miRTarBase ID miRNA Experiments Reference
MIRT020611 hsa-miR-155-5p Proteomics 18668040
MIRT024828 hsa-miR-215-5p Microarray 19074876
MIRT026277 hsa-miR-192-5p Microarray 19074876
MIRT026998 hsa-miR-103a-3p Sequencing 20371350
MIRT031510 hsa-miR-16-5p Sequencing 20371350
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
TSG101 Unknown 18948538
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
26
GO ID Ontology Definition Evidence Reference
GO:0000281 Process Mitotic cytokinesis IBA
GO:0000281 Process Mitotic cytokinesis IEA
GO:0000281 Process Mitotic cytokinesis IGI 19638580
GO:0005515 Function Protein binding IPI 16189514, 17853893, 18940611, 19549727, 20176808, 21516116, 25416956, 25910212, 26638075, 26871637, 27107012, 31515488, 32296183, 32707033, 32814053, 33961781, 35156780, 35271311, 36012204, 37100772
GO:0005737 Component Cytoplasm IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
610000 1161 ENSG00000138180
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q53EZ4
Protein name Centrosomal protein of 55 kDa (Cep55) (Up-regulated in colon cancer 6)
Protein function Plays a role in mitotic exit and cytokinesis (PubMed:16198290, PubMed:17853893). Recruits PDCD6IP and TSG101 to midbody during cytokinesis. Required for successful completion of cytokinesis (PubMed:17853893). Not required for microtubule nucleat
PDB 3E1R , 3WUT , 3WUU , 3WUV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF12180 EABR 171 204 TSG101 and ALIX binding domain of CEP55 Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in embryonic brain (PubMed:28264986). Expressed in fetal brain ganglionic eminence, kidney tubules and multinucleate neurons in the temporal cortex (PubMed:28264986). Expressed in adult brain, cerebellum, kidney tubules, inte
Sequence
MSSRSTKDLIKSKWGSKPSNSKSETTLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLL
EKIRVLEAEKEKNAYQLTEKDKEIQRLRDQLKARYSTTTLLEQLEETTREGERREQVLKA
LSEEKDVLKQQLSAATSRIAELESKTNTLRLSQTVAPNCFNSSINNIHEMEIQLKDALEK
NQQWLVYDQQREVYVKGLLAKIFE
LEKKTETAAHSLPQQTKKPESEGYLQEEKQKCYNDL
LASAKKDLEVERQTITQLSFELSEFRRKYEETQKEVHNLNQLLYSQRRADVQHLEDDRHK
TEKIQKLREENDIARGKLEEEKKRSEELLSQVQFLYTSLLKQQEEQTRVALLEQQMQACT
LDFENEKLDRQHVQHQLHVILKELRKARNQITQLESLKQLHEFAITEPLVTFQGETENRE
KVAASPKSPTAALNESLVECPKCNIQYPATEHRDLLVHVEYCSK
Sequence length 464
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
15
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormality of prenatal development or birth Likely pathogenic rs2134490704 RCV001814445
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
CEP55-related disorder Pathogenic; Likely pathogenic rs141458677, rs1297300713 RCV003419872
RCV003983842
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome Likely pathogenic; Pathogenic rs146596670, rs2493944670, rs201430235, rs141458677, rs1169095680, rs1297300713, rs572584581 RCV001375949
RCV003990765
RCV000504576
RCV000504578
RCV000681554
View all (2 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Adrenocortical carcinoma, hereditary Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA, HEPATOCELLULAR CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Colorectal cancer Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COMPLEX NEURODEVELOPMENTAL DISORDER GenCC
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
2-3 toe syndactyly Syndactyly Of The Toes HPO_DG
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 30527357
★☆☆☆☆
Found in Text Mining only
Adrenocortical Carcinoma Adrenocortical carcinoma Pubtator 32923148 Associate
★☆☆☆☆
Found in Text Mining only
Anaplastic thyroid carcinoma Anaplastic thyroid cancer BEFREE 27796151
★☆☆☆☆
Found in Text Mining only
Anencephaly Anencephaly HPO_DG
★☆☆☆☆
Found in Text Mining only
Anophthalmos Syndromic microphthalmia HPO_DG
★☆☆☆☆
Found in Text Mining only
Arthrogryposis Arthrogryposis multiplex congenita HPO_DG
★☆☆☆☆
Found in Text Mining only
Azoospermia Azoospermia Pubtator 35219767 Inhibit
★☆☆☆☆
Found in Text Mining only
Benign Prostatic Hyperplasia Benign Prostatic Hyperplasia BEFREE 25178936
★☆☆☆☆
Found in Text Mining only
Bladder Neoplasm Bladder Neoplasm BEFREE 25178936, 30277841
★☆☆☆☆
Found in Text Mining only