USP47 (ubiquitin specific peptidase 47)

Gene

• Entrez ID: 55031
• Gene name: Ubiquitin specific peptidase 47
• Gene symbol: USP47
• Synonyms (NCBI Gene): TRFP
• Chromosome: 11
• Chromosome location: 11p15.3

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT022888	hsa-miR-124-3p	Microarray	18668037
MIRT025520	hsa-miR-34a-5p	Proteomics	21566225
MIRT030994	hsa-miR-21-5p	Microarray	18591254
MIRT054194	hsa-miR-204-5p	Immunohistochemistry, Luciferase reporter assay, qRT-PCR, Western blot	25429829
MIRT054194	hsa-miR-204-5p	Immunohistochemistry, Luciferase reporter assay, qRT-PCR, Western blot	25429829
MIRT439322	hsa-miR-218-5p	HITS-CLIP	23212916
MIRT439322	hsa-miR-218-5p	HITS-CLIP	23212916
MIRT736051	hsa-miR-204-3p	Microarray	31452262
MIRT755567	hsa-miR-101-3p	Luciferase reporter assay, Western blotting, qRT-PCR, Immunoprecipitaion (IP), Immunofluorescence, RNA pull down assay	35205710
MIRT1480088	hsa-let-7a	CLIP-seq
MIRT1480089	hsa-let-7b	CLIP-seq
MIRT1480090	hsa-let-7c	CLIP-seq
MIRT1480091	hsa-let-7d	CLIP-seq
MIRT1480092	hsa-let-7e	CLIP-seq
MIRT1480093	hsa-let-7f	CLIP-seq
MIRT1480094	hsa-let-7g	CLIP-seq
MIRT1480095	hsa-let-7i	CLIP-seq
MIRT1480096	hsa-miR-101	CLIP-seq
MIRT1480097	hsa-miR-106a	CLIP-seq
MIRT1480098	hsa-miR-106b	CLIP-seq
MIRT1480099	hsa-miR-1290	CLIP-seq
MIRT1480100	hsa-miR-129-5p	CLIP-seq
MIRT1480101	hsa-miR-1298	CLIP-seq
MIRT1480102	hsa-miR-1304	CLIP-seq
MIRT1480103	hsa-miR-130a	CLIP-seq
MIRT1480104	hsa-miR-130b	CLIP-seq
MIRT1480105	hsa-miR-1321	CLIP-seq
MIRT1480106	hsa-miR-1323	CLIP-seq
MIRT1480107	hsa-miR-144	CLIP-seq
MIRT1480108	hsa-miR-17	CLIP-seq
MIRT1480109	hsa-miR-181a	CLIP-seq
MIRT1480110	hsa-miR-181b	CLIP-seq
MIRT1480111	hsa-miR-181c	CLIP-seq
MIRT1480112	hsa-miR-181d	CLIP-seq
MIRT1480113	hsa-miR-188-5p	CLIP-seq
MIRT1480114	hsa-miR-1912	CLIP-seq
MIRT1480115	hsa-miR-1913	CLIP-seq
MIRT1480116	hsa-miR-202	CLIP-seq
MIRT1480117	hsa-miR-204	CLIP-seq
MIRT1480118	hsa-miR-20a	CLIP-seq
MIRT1480119	hsa-miR-20b	CLIP-seq
MIRT1480120	hsa-miR-211	CLIP-seq
MIRT1480121	hsa-miR-219-2-3p	CLIP-seq
MIRT1480122	hsa-miR-2355-3p	CLIP-seq
MIRT1480123	hsa-miR-2467-3p	CLIP-seq
MIRT1480124	hsa-miR-2467-5p	CLIP-seq
MIRT1480125	hsa-miR-27a	CLIP-seq
MIRT1480126	hsa-miR-27b	CLIP-seq
MIRT1480127	hsa-miR-2964a-3p	CLIP-seq
MIRT1480128	hsa-miR-301a	CLIP-seq
MIRT1480129	hsa-miR-301b	CLIP-seq
MIRT1480130	hsa-miR-3121-5p	CLIP-seq
MIRT1480131	hsa-miR-3130-5p	CLIP-seq
MIRT1480132	hsa-miR-3167	CLIP-seq
MIRT1480133	hsa-miR-3188	CLIP-seq
MIRT1480134	hsa-miR-3189-5p	CLIP-seq
MIRT1480135	hsa-miR-324-3p	CLIP-seq
MIRT1480136	hsa-miR-3606	CLIP-seq
MIRT1480137	hsa-miR-3609	CLIP-seq
MIRT1480138	hsa-miR-3647-3p	CLIP-seq
MIRT1480139	hsa-miR-3666	CLIP-seq
MIRT1480140	hsa-miR-3682-5p	CLIP-seq
MIRT1480141	hsa-miR-3921	CLIP-seq
MIRT1480142	hsa-miR-3929	CLIP-seq
MIRT1480143	hsa-miR-3975	CLIP-seq
MIRT1480144	hsa-miR-4262	CLIP-seq
MIRT1480145	hsa-miR-4276	CLIP-seq
MIRT1480146	hsa-miR-4295	CLIP-seq
MIRT1480147	hsa-miR-4419a	CLIP-seq
MIRT1480148	hsa-miR-4419b	CLIP-seq
MIRT1480149	hsa-miR-4427	CLIP-seq
MIRT1480150	hsa-miR-4477a	CLIP-seq
MIRT1480151	hsa-miR-4478	CLIP-seq
MIRT1480152	hsa-miR-4482	CLIP-seq
MIRT1480153	hsa-miR-450b-5p	CLIP-seq
MIRT1480154	hsa-miR-4510	CLIP-seq
MIRT1480155	hsa-miR-4536	CLIP-seq
MIRT1480156	hsa-miR-454	CLIP-seq
MIRT1480157	hsa-miR-455-5p	CLIP-seq
MIRT1480158	hsa-miR-4646-3p	CLIP-seq
MIRT1480159	hsa-miR-4653-5p	CLIP-seq
MIRT1480160	hsa-miR-4661-5p	CLIP-seq
MIRT1480161	hsa-miR-4671-3p	CLIP-seq
MIRT1480162	hsa-miR-4680-3p	CLIP-seq
MIRT1480163	hsa-miR-4699-3p	CLIP-seq
MIRT1480164	hsa-miR-4735-5p	CLIP-seq
MIRT1480165	hsa-miR-4739	CLIP-seq
MIRT1480166	hsa-miR-4756-5p	CLIP-seq
MIRT1480167	hsa-miR-4758-3p	CLIP-seq
MIRT1480168	hsa-miR-4760-3p	CLIP-seq
MIRT1480169	hsa-miR-4793-5p	CLIP-seq
MIRT1480170	hsa-miR-4796-3p	CLIP-seq
MIRT1480171	hsa-miR-485-5p	CLIP-seq
MIRT1480172	hsa-miR-505	CLIP-seq
MIRT1480173	hsa-miR-507	CLIP-seq
MIRT1480174	hsa-miR-5096	CLIP-seq
MIRT1480175	hsa-miR-513a-5p	CLIP-seq
MIRT1480176	hsa-miR-519a	CLIP-seq
MIRT1480177	hsa-miR-519b-3p	CLIP-seq
MIRT1480178	hsa-miR-519c-3p	CLIP-seq
MIRT1480179	hsa-miR-519d	CLIP-seq
MIRT1480180	hsa-miR-548aa	CLIP-seq
MIRT1480181	hsa-miR-548ah	CLIP-seq
MIRT1480182	hsa-miR-548o	CLIP-seq
MIRT1480183	hsa-miR-557	CLIP-seq
MIRT1480184	hsa-miR-582-5p	CLIP-seq
MIRT1480185	hsa-miR-587	CLIP-seq
MIRT1480186	hsa-miR-599	CLIP-seq
MIRT1480187	hsa-miR-630	CLIP-seq
MIRT1480188	hsa-miR-642b	CLIP-seq
MIRT1480189	hsa-miR-664	CLIP-seq
MIRT1480190	hsa-miR-876-5p	CLIP-seq
MIRT1480191	hsa-miR-891b	CLIP-seq
MIRT1480192	hsa-miR-93	CLIP-seq
MIRT1480193	hsa-miR-944	CLIP-seq
MIRT1480194	hsa-miR-98	CLIP-seq
MIRT1480088	hsa-let-7a	CLIP-seq
MIRT1480089	hsa-let-7b	CLIP-seq
MIRT1480090	hsa-let-7c	CLIP-seq
MIRT1480091	hsa-let-7d	CLIP-seq
MIRT1480092	hsa-let-7e	CLIP-seq
MIRT1480093	hsa-let-7f	CLIP-seq
MIRT1480094	hsa-let-7g	CLIP-seq
MIRT1480095	hsa-let-7i	CLIP-seq
MIRT1480116	hsa-miR-202	CLIP-seq
MIRT1480121	hsa-miR-219-2-3p	CLIP-seq
MIRT1480127	hsa-miR-2964a-3p	CLIP-seq
MIRT1480145	hsa-miR-4276	CLIP-seq
MIRT1480149	hsa-miR-4427	CLIP-seq
MIRT1480162	hsa-miR-4680-3p	CLIP-seq
MIRT1480194	hsa-miR-98	CLIP-seq
MIRT1480088	hsa-let-7a	CLIP-seq
MIRT1480089	hsa-let-7b	CLIP-seq
MIRT1480090	hsa-let-7c	CLIP-seq
MIRT1480091	hsa-let-7d	CLIP-seq
MIRT1480092	hsa-let-7e	CLIP-seq
MIRT1480093	hsa-let-7f	CLIP-seq
MIRT1480094	hsa-let-7g	CLIP-seq
MIRT1480095	hsa-let-7i	CLIP-seq
MIRT2144474	hsa-miR-127-5p	CLIP-seq
MIRT1480106	hsa-miR-1323	CLIP-seq
MIRT1480116	hsa-miR-202	CLIP-seq
MIRT1480121	hsa-miR-219-2-3p	CLIP-seq
MIRT1480127	hsa-miR-2964a-3p	CLIP-seq
MIRT2144475	hsa-miR-3136-3p	CLIP-seq
MIRT2144476	hsa-miR-3677-5p	CLIP-seq
MIRT1480140	hsa-miR-3682-5p	CLIP-seq
MIRT2144477	hsa-miR-3919	CLIP-seq
MIRT2144478	hsa-miR-3920	CLIP-seq
MIRT1480145	hsa-miR-4276	CLIP-seq
MIRT2144479	hsa-miR-4282	CLIP-seq
MIRT2144480	hsa-miR-4289	CLIP-seq
MIRT1480149	hsa-miR-4427	CLIP-seq
MIRT1480150	hsa-miR-4477a	CLIP-seq
MIRT2144481	hsa-miR-451b	CLIP-seq
MIRT2144482	hsa-miR-4659a-3p	CLIP-seq
MIRT2144483	hsa-miR-4659b-3p	CLIP-seq
MIRT1480162	hsa-miR-4680-3p	CLIP-seq
MIRT2144484	hsa-miR-4698	CLIP-seq
MIRT1480163	hsa-miR-4699-3p	CLIP-seq
MIRT2144485	hsa-miR-4762-3p	CLIP-seq
MIRT2144486	hsa-miR-4775	CLIP-seq
MIRT2144487	hsa-miR-4786-3p	CLIP-seq
MIRT1480169	hsa-miR-4793-5p	CLIP-seq
MIRT2144488	hsa-miR-4795-3p	CLIP-seq
MIRT1480182	hsa-miR-548o	CLIP-seq
MIRT2144489	hsa-miR-556-5p	CLIP-seq
MIRT2144490	hsa-miR-590-3p	CLIP-seq
MIRT2144491	hsa-miR-663b	CLIP-seq
MIRT1480194	hsa-miR-98	CLIP-seq
MIRT1480088	hsa-let-7a	CLIP-seq
MIRT1480089	hsa-let-7b	CLIP-seq
MIRT1480090	hsa-let-7c	CLIP-seq
MIRT1480091	hsa-let-7d	CLIP-seq
MIRT1480092	hsa-let-7e	CLIP-seq
MIRT1480093	hsa-let-7f	CLIP-seq
MIRT1480094	hsa-let-7g	CLIP-seq
MIRT1480095	hsa-let-7i	CLIP-seq
MIRT1480096	hsa-miR-101	CLIP-seq
MIRT2364744	hsa-miR-1184	CLIP-seq
MIRT1480099	hsa-miR-1290	CLIP-seq
MIRT1480102	hsa-miR-1304	CLIP-seq
MIRT1480103	hsa-miR-130a	CLIP-seq
MIRT1480104	hsa-miR-130b	CLIP-seq
MIRT1480105	hsa-miR-1321	CLIP-seq
MIRT1480106	hsa-miR-1323	CLIP-seq
MIRT2364745	hsa-miR-141	CLIP-seq
MIRT1480107	hsa-miR-144	CLIP-seq
MIRT1480113	hsa-miR-188-5p	CLIP-seq
MIRT2364746	hsa-miR-200a	CLIP-seq
MIRT1480116	hsa-miR-202	CLIP-seq
MIRT1480117	hsa-miR-204	CLIP-seq
MIRT1480120	hsa-miR-211	CLIP-seq
MIRT2364747	hsa-miR-217	CLIP-seq
MIRT1480121	hsa-miR-219-2-3p	CLIP-seq
MIRT1480123	hsa-miR-2467-3p	CLIP-seq
MIRT1480124	hsa-miR-2467-5p	CLIP-seq
MIRT1480127	hsa-miR-2964a-3p	CLIP-seq
MIRT1480128	hsa-miR-301a	CLIP-seq
MIRT1480129	hsa-miR-301b	CLIP-seq
MIRT2364748	hsa-miR-3126-3p	CLIP-seq
MIRT2364749	hsa-miR-3128	CLIP-seq
MIRT1480132	hsa-miR-3167	CLIP-seq
MIRT1480133	hsa-miR-3188	CLIP-seq
MIRT2364750	hsa-miR-3200-5p	CLIP-seq
MIRT2364751	hsa-miR-323-3p	CLIP-seq
MIRT2364752	hsa-miR-3622b-5p	CLIP-seq
MIRT2364753	hsa-miR-3661	CLIP-seq
MIRT1480139	hsa-miR-3666	CLIP-seq
MIRT1480140	hsa-miR-3682-5p	CLIP-seq
MIRT2364754	hsa-miR-370	CLIP-seq
MIRT2364755	hsa-miR-374a	CLIP-seq
MIRT2364756	hsa-miR-374b	CLIP-seq
MIRT1480142	hsa-miR-3929	CLIP-seq
MIRT1480143	hsa-miR-3975	CLIP-seq
MIRT2364757	hsa-miR-4269	CLIP-seq
MIRT1480146	hsa-miR-4295	CLIP-seq
MIRT2364758	hsa-miR-4303	CLIP-seq
MIRT2364759	hsa-miR-4418	CLIP-seq
MIRT1480147	hsa-miR-4419a	CLIP-seq
MIRT1480148	hsa-miR-4419b	CLIP-seq
MIRT1480149	hsa-miR-4427	CLIP-seq
MIRT1480151	hsa-miR-4478	CLIP-seq
MIRT1480154	hsa-miR-4510	CLIP-seq
MIRT2364760	hsa-miR-4514	CLIP-seq
MIRT2144481	hsa-miR-451b	CLIP-seq
MIRT1480156	hsa-miR-454	CLIP-seq
MIRT1480157	hsa-miR-455-5p	CLIP-seq
MIRT1480160	hsa-miR-4661-5p	CLIP-seq
MIRT1480161	hsa-miR-4671-3p	CLIP-seq
MIRT1480162	hsa-miR-4680-3p	CLIP-seq
MIRT2364761	hsa-miR-4692	CLIP-seq
MIRT1480163	hsa-miR-4699-3p	CLIP-seq
MIRT2364762	hsa-miR-4719	CLIP-seq
MIRT2364763	hsa-miR-4720-5p	CLIP-seq
MIRT1480165	hsa-miR-4739	CLIP-seq
MIRT2364764	hsa-miR-4742-5p	CLIP-seq
MIRT1480166	hsa-miR-4756-5p	CLIP-seq
MIRT2144485	hsa-miR-4762-3p	CLIP-seq
MIRT1480169	hsa-miR-4793-5p	CLIP-seq
MIRT2144488	hsa-miR-4795-3p	CLIP-seq
MIRT2364765	hsa-miR-4799-3p	CLIP-seq
MIRT1480171	hsa-miR-485-5p	CLIP-seq
MIRT2364766	hsa-miR-509-3-5p	CLIP-seq
MIRT2364767	hsa-miR-509-5p	CLIP-seq
MIRT1480174	hsa-miR-5096	CLIP-seq
MIRT1480182	hsa-miR-548o	CLIP-seq
MIRT2364768	hsa-miR-561	CLIP-seq
MIRT1480184	hsa-miR-582-5p	CLIP-seq
MIRT2364769	hsa-miR-622	CLIP-seq
MIRT2364770	hsa-miR-631	CLIP-seq
MIRT1480188	hsa-miR-642b	CLIP-seq
MIRT2144491	hsa-miR-663b	CLIP-seq
MIRT1480190	hsa-miR-876-5p	CLIP-seq
MIRT2364771	hsa-miR-935	CLIP-seq
MIRT1480194	hsa-miR-98	CLIP-seq
MIRT1480088	hsa-let-7a	CLIP-seq
MIRT1480089	hsa-let-7b	CLIP-seq
MIRT1480090	hsa-let-7c	CLIP-seq
MIRT1480091	hsa-let-7d	CLIP-seq
MIRT1480092	hsa-let-7e	CLIP-seq
MIRT1480093	hsa-let-7f	CLIP-seq
MIRT1480094	hsa-let-7g	CLIP-seq
MIRT1480095	hsa-let-7i	CLIP-seq
MIRT1480096	hsa-miR-101	CLIP-seq
MIRT1480100	hsa-miR-129-5p	CLIP-seq
MIRT1480107	hsa-miR-144	CLIP-seq
MIRT1480116	hsa-miR-202	CLIP-seq
MIRT1480117	hsa-miR-204	CLIP-seq
MIRT1480120	hsa-miR-211	CLIP-seq
MIRT1480121	hsa-miR-219-2-3p	CLIP-seq
MIRT1480124	hsa-miR-2467-5p	CLIP-seq
MIRT1480127	hsa-miR-2964a-3p	CLIP-seq
MIRT1480133	hsa-miR-3188	CLIP-seq
MIRT1480143	hsa-miR-3975	CLIP-seq
MIRT1480149	hsa-miR-4427	CLIP-seq
MIRT1480162	hsa-miR-4680-3p	CLIP-seq
MIRT1480171	hsa-miR-485-5p	CLIP-seq
MIRT1480174	hsa-miR-5096	CLIP-seq
MIRT1480184	hsa-miR-582-5p	CLIP-seq
MIRT1480194	hsa-miR-98	CLIP-seq
MIRT2144482	hsa-miR-4659a-3p	CLIP-seq
MIRT2144483	hsa-miR-4659b-3p	CLIP-seq
MIRT2441617	hsa-miR-4684-5p	CLIP-seq
MIRT2441618	hsa-miR-494	CLIP-seq
MIRT1480096	hsa-miR-101	CLIP-seq
MIRT1480097	hsa-miR-106a	CLIP-seq
MIRT1480098	hsa-miR-106b	CLIP-seq
MIRT2463061	hsa-miR-1183	CLIP-seq
MIRT2463062	hsa-miR-124	CLIP-seq
MIRT2463063	hsa-miR-1302	CLIP-seq
MIRT1480103	hsa-miR-130a	CLIP-seq
MIRT1480104	hsa-miR-130b	CLIP-seq
MIRT2463064	hsa-miR-139-5p	CLIP-seq
MIRT1480107	hsa-miR-144	CLIP-seq
MIRT2463065	hsa-miR-146a	CLIP-seq
MIRT2463066	hsa-miR-146b-5p	CLIP-seq
MIRT1480108	hsa-miR-17	CLIP-seq
MIRT1480115	hsa-miR-1913	CLIP-seq
MIRT2463067	hsa-miR-203	CLIP-seq
MIRT1480118	hsa-miR-20a	CLIP-seq
MIRT1480119	hsa-miR-20b	CLIP-seq
MIRT2463068	hsa-miR-2278	CLIP-seq
MIRT2463069	hsa-miR-2355-5p	CLIP-seq
MIRT2463070	hsa-miR-298	CLIP-seq
MIRT1480128	hsa-miR-301a	CLIP-seq
MIRT1480129	hsa-miR-301b	CLIP-seq
MIRT2463071	hsa-miR-3125	CLIP-seq
MIRT2463072	hsa-miR-3133	CLIP-seq
MIRT2463073	hsa-miR-3144-3p	CLIP-seq
MIRT2463074	hsa-miR-3163	CLIP-seq
MIRT1480134	hsa-miR-3189-5p	CLIP-seq
MIRT1480135	hsa-miR-324-3p	CLIP-seq
MIRT2463075	hsa-miR-3607-3p	CLIP-seq
MIRT1480137	hsa-miR-3609	CLIP-seq
MIRT2463076	hsa-miR-3613-3p	CLIP-seq
MIRT1480139	hsa-miR-3666	CLIP-seq
MIRT2463077	hsa-miR-3916	CLIP-seq
MIRT2364757	hsa-miR-4269	CLIP-seq
MIRT1480146	hsa-miR-4295	CLIP-seq
MIRT2463078	hsa-miR-4298	CLIP-seq
MIRT2463079	hsa-miR-4468	CLIP-seq
MIRT1480150	hsa-miR-4477a	CLIP-seq
MIRT2463080	hsa-miR-4511	CLIP-seq
MIRT2364760	hsa-miR-4514	CLIP-seq
MIRT1480156	hsa-miR-454	CLIP-seq
MIRT2463081	hsa-miR-4639-3p	CLIP-seq
MIRT1480160	hsa-miR-4661-5p	CLIP-seq
MIRT2463082	hsa-miR-4668-3p	CLIP-seq
MIRT2364761	hsa-miR-4692	CLIP-seq
MIRT2463083	hsa-miR-4693-5p	CLIP-seq
MIRT2463084	hsa-miR-4712-3p	CLIP-seq
MIRT2463085	hsa-miR-4724-3p	CLIP-seq
MIRT2463086	hsa-miR-4731-3p	CLIP-seq
MIRT2364764	hsa-miR-4742-5p	CLIP-seq
MIRT2463087	hsa-miR-4753-3p	CLIP-seq
MIRT1480167	hsa-miR-4758-3p	CLIP-seq
MIRT2463088	hsa-miR-4768-5p	CLIP-seq
MIRT2463089	hsa-miR-4773	CLIP-seq
MIRT1480170	hsa-miR-4796-3p	CLIP-seq
MIRT2463090	hsa-miR-4801	CLIP-seq
MIRT2463091	hsa-miR-506	CLIP-seq
MIRT1480174	hsa-miR-5096	CLIP-seq
MIRT1480176	hsa-miR-519a	CLIP-seq
MIRT1480177	hsa-miR-519b-3p	CLIP-seq
MIRT1480178	hsa-miR-519c-3p	CLIP-seq
MIRT1480179	hsa-miR-519d	CLIP-seq
MIRT2463092	hsa-miR-520a-5p	CLIP-seq
MIRT2463093	hsa-miR-525-5p	CLIP-seq
MIRT2463094	hsa-miR-548a-5p	CLIP-seq
MIRT2463095	hsa-miR-548ab	CLIP-seq
MIRT1480181	hsa-miR-548ah	CLIP-seq
MIRT2463096	hsa-miR-548ak	CLIP-seq
MIRT2463097	hsa-miR-548b-5p	CLIP-seq
MIRT2463098	hsa-miR-548c-5p	CLIP-seq
MIRT2463099	hsa-miR-548d-5p	CLIP-seq
MIRT2463100	hsa-miR-548h	CLIP-seq
MIRT2463101	hsa-miR-548i	CLIP-seq
MIRT2463102	hsa-miR-548j	CLIP-seq
MIRT2463103	hsa-miR-548k	CLIP-seq
MIRT2463104	hsa-miR-548l	CLIP-seq
MIRT2463105	hsa-miR-548p	CLIP-seq
MIRT2463106	hsa-miR-548w	CLIP-seq
MIRT2463107	hsa-miR-548y	CLIP-seq
MIRT2463108	hsa-miR-559	CLIP-seq
MIRT2463109	hsa-miR-579	CLIP-seq
MIRT2463110	hsa-miR-589	CLIP-seq
MIRT2144490	hsa-miR-590-3p	CLIP-seq
MIRT1480186	hsa-miR-599	CLIP-seq
MIRT1480188	hsa-miR-642b	CLIP-seq
MIRT2463111	hsa-miR-875-5p	CLIP-seq
MIRT1480191	hsa-miR-891b	CLIP-seq
MIRT1480192	hsa-miR-93	CLIP-seq
MIRT1480193	hsa-miR-944	CLIP-seq
MIRT2658594	hsa-miR-103a	CLIP-seq
MIRT2658595	hsa-miR-107	CLIP-seq
MIRT2658596	hsa-miR-1179	CLIP-seq
MIRT2364744	hsa-miR-1184	CLIP-seq
MIRT2463062	hsa-miR-124	CLIP-seq
MIRT2144474	hsa-miR-127-5p	CLIP-seq
MIRT1480106	hsa-miR-1323	CLIP-seq
MIRT2364745	hsa-miR-141	CLIP-seq
MIRT2658597	hsa-miR-186	CLIP-seq
MIRT1480115	hsa-miR-1913	CLIP-seq
MIRT2364746	hsa-miR-200a	CLIP-seq
MIRT2658598	hsa-miR-200b	CLIP-seq
MIRT2658599	hsa-miR-200c	CLIP-seq
MIRT2658600	hsa-miR-2116	CLIP-seq
MIRT2658601	hsa-miR-22	CLIP-seq
MIRT2658602	hsa-miR-2276	CLIP-seq
MIRT2463068	hsa-miR-2278	CLIP-seq
MIRT2658603	hsa-miR-2681	CLIP-seq
MIRT2658604	hsa-miR-28-3p	CLIP-seq
MIRT2463070	hsa-miR-298	CLIP-seq
MIRT1480130	hsa-miR-3121-5p	CLIP-seq
MIRT2658605	hsa-miR-3160-3p	CLIP-seq
MIRT2658606	hsa-miR-3180-5p	CLIP-seq
MIRT1480134	hsa-miR-3189-5p	CLIP-seq
MIRT2364750	hsa-miR-3200-5p	CLIP-seq
MIRT1480135	hsa-miR-324-3p	CLIP-seq
MIRT2658607	hsa-miR-3545-3p	CLIP-seq
MIRT2463076	hsa-miR-3613-3p	CLIP-seq
MIRT2658608	hsa-miR-3616-5p	CLIP-seq
MIRT2658609	hsa-miR-3646	CLIP-seq
MIRT2658610	hsa-miR-3647-5p	CLIP-seq
MIRT2658611	hsa-miR-3662	CLIP-seq
MIRT2658612	hsa-miR-3664-5p	CLIP-seq
MIRT2364754	hsa-miR-370	CLIP-seq
MIRT2364755	hsa-miR-374a	CLIP-seq
MIRT2364756	hsa-miR-374b	CLIP-seq
MIRT2658613	hsa-miR-374c	CLIP-seq
MIRT2144477	hsa-miR-3919	CLIP-seq
MIRT2658614	hsa-miR-409-3p	CLIP-seq
MIRT2658615	hsa-miR-421	CLIP-seq
MIRT2658616	hsa-miR-429	CLIP-seq
MIRT2364758	hsa-miR-4303	CLIP-seq
MIRT2658617	hsa-miR-4311	CLIP-seq
MIRT2364759	hsa-miR-4418	CLIP-seq
MIRT2463079	hsa-miR-4468	CLIP-seq
MIRT2658618	hsa-miR-4475	CLIP-seq
MIRT2658619	hsa-miR-4487	CLIP-seq
MIRT2658620	hsa-miR-4502	CLIP-seq
MIRT2658621	hsa-miR-450b-3p	CLIP-seq
MIRT2658622	hsa-miR-4521	CLIP-seq
MIRT2658623	hsa-miR-4635	CLIP-seq
MIRT2658624	hsa-miR-4666-5p	CLIP-seq
MIRT2658625	hsa-miR-4677-5p	CLIP-seq
MIRT2441617	hsa-miR-4684-5p	CLIP-seq
MIRT2658626	hsa-miR-4699-5p	CLIP-seq
MIRT2658627	hsa-miR-4709-5p	CLIP-seq
MIRT2658628	hsa-miR-4713-3p	CLIP-seq
MIRT2658629	hsa-miR-4714-5p	CLIP-seq
MIRT2658630	hsa-miR-4715-3p	CLIP-seq
MIRT2463086	hsa-miR-4731-3p	CLIP-seq
MIRT2658631	hsa-miR-4731-5p	CLIP-seq
MIRT1480167	hsa-miR-4758-3p	CLIP-seq
MIRT2144485	hsa-miR-4762-3p	CLIP-seq
MIRT2658632	hsa-miR-4772-3p	CLIP-seq
MIRT2463089	hsa-miR-4773	CLIP-seq
MIRT2658633	hsa-miR-4777-5p	CLIP-seq
MIRT2144487	hsa-miR-4786-3p	CLIP-seq
MIRT2463090	hsa-miR-4801	CLIP-seq
MIRT2441618	hsa-miR-494	CLIP-seq
MIRT2463091	hsa-miR-506	CLIP-seq
MIRT2364766	hsa-miR-509-3-5p	CLIP-seq
MIRT2364767	hsa-miR-509-5p	CLIP-seq
MIRT2658634	hsa-miR-513b	CLIP-seq
MIRT2658635	hsa-miR-518d-5p	CLIP-seq
MIRT2658636	hsa-miR-519b-5p	CLIP-seq
MIRT2658637	hsa-miR-519c-5p	CLIP-seq
MIRT2463092	hsa-miR-520a-5p	CLIP-seq
MIRT2658638	hsa-miR-520c-5p	CLIP-seq
MIRT2658639	hsa-miR-520d-5p	CLIP-seq
MIRT2658640	hsa-miR-524-5p	CLIP-seq
MIRT2463093	hsa-miR-525-5p	CLIP-seq
MIRT2658641	hsa-miR-526a	CLIP-seq
MIRT2658642	hsa-miR-548ac	CLIP-seq
MIRT2658643	hsa-miR-548ae	CLIP-seq
MIRT2658644	hsa-miR-548aj	CLIP-seq
MIRT2658645	hsa-miR-548am	CLIP-seq
MIRT2658646	hsa-miR-548d-3p	CLIP-seq
MIRT1480182	hsa-miR-548o	CLIP-seq
MIRT2658647	hsa-miR-548x	CLIP-seq
MIRT2658648	hsa-miR-548z	CLIP-seq
MIRT2658649	hsa-miR-558	CLIP-seq
MIRT2658650	hsa-miR-573	CLIP-seq
MIRT2658651	hsa-miR-576-3p	CLIP-seq
MIRT2658652	hsa-miR-638	CLIP-seq
MIRT1480188	hsa-miR-642b	CLIP-seq
MIRT2658653	hsa-miR-655	CLIP-seq
MIRT2658654	hsa-miR-769-3p	CLIP-seq
MIRT2364771	hsa-miR-935	CLIP-seq
MIRT2658594	hsa-miR-103a	CLIP-seq
MIRT2658595	hsa-miR-107	CLIP-seq
MIRT2364744	hsa-miR-1184	CLIP-seq
MIRT2463062	hsa-miR-124	CLIP-seq
MIRT1480106	hsa-miR-1323	CLIP-seq
MIRT2364745	hsa-miR-141	CLIP-seq
MIRT2658597	hsa-miR-186	CLIP-seq
MIRT2364746	hsa-miR-200a	CLIP-seq
MIRT2658598	hsa-miR-200b	CLIP-seq
MIRT2658599	hsa-miR-200c	CLIP-seq
MIRT2658600	hsa-miR-2116	CLIP-seq
MIRT2658601	hsa-miR-22	CLIP-seq
MIRT2658602	hsa-miR-2276	CLIP-seq
MIRT2463068	hsa-miR-2278	CLIP-seq
MIRT2658603	hsa-miR-2681	CLIP-seq
MIRT2463070	hsa-miR-298	CLIP-seq
MIRT2463072	hsa-miR-3133	CLIP-seq
MIRT2658605	hsa-miR-3160-3p	CLIP-seq
MIRT2658606	hsa-miR-3180-5p	CLIP-seq
MIRT2364750	hsa-miR-3200-5p	CLIP-seq
MIRT2658607	hsa-miR-3545-3p	CLIP-seq
MIRT2463076	hsa-miR-3613-3p	CLIP-seq
MIRT2658609	hsa-miR-3646	CLIP-seq
MIRT2658611	hsa-miR-3662	CLIP-seq
MIRT2658612	hsa-miR-3664-5p	CLIP-seq
MIRT2364754	hsa-miR-370	CLIP-seq
MIRT2364755	hsa-miR-374a	CLIP-seq
MIRT2364756	hsa-miR-374b	CLIP-seq
MIRT2658613	hsa-miR-374c	CLIP-seq
MIRT2658614	hsa-miR-409-3p	CLIP-seq
MIRT2658616	hsa-miR-429	CLIP-seq
MIRT2364758	hsa-miR-4303	CLIP-seq
MIRT2364759	hsa-miR-4418	CLIP-seq
MIRT2463079	hsa-miR-4468	CLIP-seq
MIRT2658618	hsa-miR-4475	CLIP-seq
MIRT2658619	hsa-miR-4487	CLIP-seq
MIRT2658620	hsa-miR-4502	CLIP-seq
MIRT2658621	hsa-miR-450b-3p	CLIP-seq
MIRT2658622	hsa-miR-4521	CLIP-seq
MIRT2658625	hsa-miR-4677-5p	CLIP-seq
MIRT2441617	hsa-miR-4684-5p	CLIP-seq
MIRT2658628	hsa-miR-4713-3p	CLIP-seq
MIRT2658629	hsa-miR-4714-5p	CLIP-seq
MIRT2658630	hsa-miR-4715-3p	CLIP-seq
MIRT2658631	hsa-miR-4731-5p	CLIP-seq
MIRT2144485	hsa-miR-4762-3p	CLIP-seq
MIRT2658632	hsa-miR-4772-3p	CLIP-seq
MIRT2463089	hsa-miR-4773	CLIP-seq
MIRT2441618	hsa-miR-494	CLIP-seq
MIRT2463091	hsa-miR-506	CLIP-seq
MIRT2364766	hsa-miR-509-3-5p	CLIP-seq
MIRT2364767	hsa-miR-509-5p	CLIP-seq
MIRT2463092	hsa-miR-520a-5p	CLIP-seq
MIRT2463093	hsa-miR-525-5p	CLIP-seq
MIRT1480182	hsa-miR-548o	CLIP-seq
MIRT2658649	hsa-miR-558	CLIP-seq
MIRT2658652	hsa-miR-638	CLIP-seq
MIRT2658653	hsa-miR-655	CLIP-seq
MIRT2658654	hsa-miR-769-3p	CLIP-seq
MIRT2364771	hsa-miR-935	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0004843	Function	Cysteine-type deubiquitinase activity	IBA
GO:0004843	Function	Cysteine-type deubiquitinase activity	IDA	21362556, 36749823
GO:0004843	Function	Cysteine-type deubiquitinase activity	IEA
GO:0004843	Function	Cysteine-type deubiquitinase activity	TAS
GO:0005515	Function	Protein binding	IPI	21362556, 25416956, 28514442, 32296183, 33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	36749823
GO:0005654	Component	Nucleoplasm	TAS
GO:0005737	Component	Cytoplasm	IDA	21362556
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IBA
GO:0006281	Process	DNA repair	IEA
GO:0006284	Process	Base-excision repair	IMP	21362556
GO:0006508	Process	Proteolysis	IEA
GO:0006974	Process	DNA damage response	IEA
GO:0006974	Process	DNA damage response	IMP	21362556
GO:0008233	Function	Peptidase activity	IEA
GO:0008234	Function	Cysteine-type peptidase activity	IEA
GO:0008630	Process	Intrinsic apoptotic signaling pathway in response to DNA damage	IEA
GO:0016579	Process	Protein deubiquitination	IEA
GO:0016579	Process	Protein deubiquitination	TAS
GO:0016787	Function	Hydrolase activity	IEA
GO:0019005	Component	SCF ubiquitin ligase complex	IDA	19966869
GO:0031647	Process	Regulation of protein stability	IBA
GO:0035520	Process	Monoubiquitinated protein deubiquitination	IDA	21362556
GO:0071987	Function	WD40-repeat domain binding	IPI	19966869
GO:0090263	Process	Positive regulation of canonical Wnt signaling pathway	IMP	26169834, 36749823
GO:0101005	Function	Deubiquitinase activity	IDA	26169834
GO:1902230	Process	Negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	IEA

Other IDs

• MIM: 614460
• HGNC: 20076
• e!Ensembl: ENSG00000170242

Protein

• UniProt ID: Q96K76
• Protein name: Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
• Protein function: Ubiquitin-specific protease that specifically deubiquitinates monoubiquitinated DNA polymerase beta (POLB), stabilizing POLB thereby playing a role in base-excision repair (BER). Acts as a regulator of cell growth and genome integrity. May also
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00443	UCH	188 → 561	Ubiquitin carboxyl-terminal hydrolase	Family

• Tissue specificity: TISSUE SPECIFICITY: Expressed in skeletal muscle, heart and testis. {ECO:0000269|PubMed:14715245}.
• Sequence:

  MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIENAAEEPRVLCIIQDTTNSKTVNERI
  TLNLPASTPVRKLFEDVANKVGYINGTFDLVWGNGINTADMAPLDHTSDKSLLDANFEPG
  KKNFLHLTDKDGEQPQILLEDSSAGEDSVHDRFIGPLPREGSGGSTSDYVSQSYSYSSIL
  NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
  VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
  YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
  QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
  IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL
  EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSS
  GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQKERELEEQEKRQR
  EIERNTCKIKLFCLHPTKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEEVIPLDCCRLVK
  YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQVFQSYKPGEVMVKVHV
  VDLKAESVAAPITVRAYLNQTVTEFKQLISKAIHLPAETMRIVLERCYNDLRLLSVSSKT
  LKAEGFFRSNKVFVESSETLDYQMAFADSHLWKLLDRHANTIRLFVLLPEQSPVSYSKRT
  AYQKAGGDSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKST
  ETSDFENIESPLNERDSSASVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSD
  ILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYD
  ESGKSRGEMQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHF
  KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCKF
  LLDAVFAKGMTVRQSKEELIPQLREQCGLELSIDRFRLRKKTWKNPGTVFLDYHIYEEDI
  NISSNWEVFLEVLDGVEKMKSMSQLAVLSRRWKPSEMKLDPFQEVVLESSSVDELREKLS
  EISGIPLDDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
  TEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD

• Sequence length: 1375

Pathways

Reactome:

Ub-specific processing proteases

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
COLORECTAL CANCER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
INSOMNIA	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Lung cancer	Uncertain significance	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Sarcoma	Uncertain significance	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Thyroid cancer, nonmedullary, 1	Likely benign	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Amyotrophic Lateral Sclerosis	Amyotrophic lateral sclerosis	Pubtator	31925813	Associate	★☆☆☆☆ Found in Text Mining only
Amyotrophic lateral sclerosis 1	Amyotrophic lateral sclerosis	Pubtator	31925813	Associate	★☆☆☆☆ Found in Text Mining only
Autoimmune Diseases	Autoimmune disease	Pubtator	37788092	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma, Ovarian Epithelial	Ovarian Epithelial carcinoma	BEFREE	31526052		★☆☆☆☆ Found in Text Mining only
Colon Carcinoma	Colon Carcinoma	BEFREE	30742943		★☆☆☆☆ Found in Text Mining only
Colorectal Carcinoma	Colorectal Cancer	BEFREE	29162839, 31233752		★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	37788092	Associate	★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of ovary	Ovarian cancer	BEFREE	31526052		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of stomach	Stomach Neoplasms	BEFREE	25429829		★☆☆☆☆ Found in Text Mining only
Malignant tumor of colon	Colonic Neoplasms	BEFREE	30742943		★☆☆☆☆ Found in Text Mining only
Nasopharyngeal Carcinoma	Nasopharyngeal carcinoma	Pubtator	33576460	Stimulate	★☆☆☆☆ Found in Text Mining only
ovarian neoplasm	Ovarian neoplasm	BEFREE	31526052		★☆☆☆☆ Found in Text Mining only
Ovarian Neoplasms	Ovarian neoplasm	Pubtator	31526052	Associate	★☆☆☆☆ Found in Text Mining only
Stomach Carcinoma	Stomach Carcinoma	BEFREE	25429829		★☆☆☆☆ Found in Text Mining only
Stomach Neoplasms	Stomach neoplasms	Pubtator	37788092	Associate	★☆☆☆☆ Found in Text Mining only