Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	55002
Gene name	Solute carrier family 9 member D1
Gene symbol	SLC9D1
Synonyms (NCBI Gene)	C13orf11TMCO3
Chromosome	13
Chromosome location	13q34

138

Show/Hide all (138)

miRTarBase ID	miRNA	Experiments	Reference
MIRT028871	hsa-miR-26b-5p	Microarray	19088304
MIRT047984	hsa-miR-30c-5p	CLASH	23622248
MIRT2128340	hsa-miR-606	CLIP-seq
MIRT2350030	hsa-miR-124	CLIP-seq
MIRT2350031	hsa-miR-181a	CLIP-seq
MIRT2350032	hsa-miR-181b	CLIP-seq
MIRT2350033	hsa-miR-181c	CLIP-seq
MIRT2350034	hsa-miR-181d	CLIP-seq
MIRT2350035	hsa-miR-217	CLIP-seq
MIRT2350036	hsa-miR-3657	CLIP-seq
MIRT2350037	hsa-miR-421	CLIP-seq
MIRT2350038	hsa-miR-4262	CLIP-seq
MIRT2350039	hsa-miR-4269	CLIP-seq
MIRT2350040	hsa-miR-4418	CLIP-seq
MIRT2350041	hsa-miR-4449	CLIP-seq
MIRT2350042	hsa-miR-4494	CLIP-seq
MIRT2350043	hsa-miR-4532	CLIP-seq
MIRT2350044	hsa-miR-4645-5p	CLIP-seq
MIRT2350045	hsa-miR-4673	CLIP-seq
MIRT2350046	hsa-miR-4709-5p	CLIP-seq
MIRT2350047	hsa-miR-4761-5p	CLIP-seq
MIRT2350048	hsa-miR-506	CLIP-seq
MIRT2350049	hsa-miR-509-3-5p	CLIP-seq
MIRT2350050	hsa-miR-509-5p	CLIP-seq
MIRT2350051	hsa-miR-548ad	CLIP-seq
MIRT2350052	hsa-miR-934	CLIP-seq
MIRT2643488	hsa-miR-1267	CLIP-seq
MIRT2643489	hsa-miR-18a	CLIP-seq
MIRT2643490	hsa-miR-18b	CLIP-seq
MIRT2643491	hsa-miR-2115	CLIP-seq
MIRT2643492	hsa-miR-3121-3p	CLIP-seq
MIRT2643493	hsa-miR-3187-3p	CLIP-seq
MIRT2643494	hsa-miR-3194-3p	CLIP-seq
MIRT2643495	hsa-miR-338-5p	CLIP-seq
MIRT2643496	hsa-miR-3545-3p	CLIP-seq
MIRT2643497	hsa-miR-3613-5p	CLIP-seq
MIRT2643498	hsa-miR-3653	CLIP-seq
MIRT2643499	hsa-miR-3658	CLIP-seq
MIRT2643500	hsa-miR-374a	CLIP-seq
MIRT2643501	hsa-miR-374b	CLIP-seq
MIRT2643502	hsa-miR-382	CLIP-seq
MIRT2643503	hsa-miR-3977	CLIP-seq
MIRT2643504	hsa-miR-4286	CLIP-seq
MIRT2643505	hsa-miR-4423-5p	CLIP-seq
MIRT2643506	hsa-miR-4446-3p	CLIP-seq
MIRT2643507	hsa-miR-4480	CLIP-seq
MIRT2643508	hsa-miR-4502	CLIP-seq
MIRT2643509	hsa-miR-4529-5p	CLIP-seq
MIRT2643510	hsa-miR-4652-3p	CLIP-seq
MIRT2643511	hsa-miR-4670-3p	CLIP-seq
MIRT2643512	hsa-miR-4675	CLIP-seq
MIRT2643513	hsa-miR-4687-3p	CLIP-seq
MIRT2643514	hsa-miR-4721	CLIP-seq
MIRT2643515	hsa-miR-4729	CLIP-seq
MIRT2643516	hsa-miR-4735-3p	CLIP-seq
MIRT2643517	hsa-miR-4741	CLIP-seq
MIRT2350047	hsa-miR-4761-5p	CLIP-seq
MIRT2643518	hsa-miR-4775	CLIP-seq
MIRT2643519	hsa-miR-483-3p	CLIP-seq
MIRT2643520	hsa-miR-518e	CLIP-seq
MIRT2643521	hsa-miR-548a-5p	CLIP-seq
MIRT2643522	hsa-miR-548ab	CLIP-seq
MIRT2643523	hsa-miR-548ae	CLIP-seq
MIRT2643524	hsa-miR-548aj	CLIP-seq
MIRT2643525	hsa-miR-548ak	CLIP-seq
MIRT2643526	hsa-miR-548am	CLIP-seq
MIRT2643527	hsa-miR-548an	CLIP-seq
MIRT2643528	hsa-miR-548b-5p	CLIP-seq
MIRT2643529	hsa-miR-548c-5p	CLIP-seq
MIRT2643530	hsa-miR-548d-5p	CLIP-seq
MIRT2643531	hsa-miR-548h	CLIP-seq
MIRT2643532	hsa-miR-548i	CLIP-seq
MIRT2643533	hsa-miR-548j	CLIP-seq
MIRT2643534	hsa-miR-548n	CLIP-seq
MIRT2643535	hsa-miR-548t	CLIP-seq
MIRT2643536	hsa-miR-548w	CLIP-seq
MIRT2643537	hsa-miR-548x	CLIP-seq
MIRT2643538	hsa-miR-548y	CLIP-seq
MIRT2643539	hsa-miR-559	CLIP-seq
MIRT2643540	hsa-miR-570	CLIP-seq
MIRT2643541	hsa-miR-579	CLIP-seq
MIRT2643542	hsa-miR-590-3p	CLIP-seq
MIRT2643543	hsa-miR-646	CLIP-seq
MIRT2643544	hsa-miR-944	CLIP-seq
MIRT2643488	hsa-miR-1267	CLIP-seq
MIRT2643489	hsa-miR-18a	CLIP-seq
MIRT2643490	hsa-miR-18b	CLIP-seq
MIRT2693267	hsa-miR-204	CLIP-seq
MIRT2693268	hsa-miR-211	CLIP-seq
MIRT2643491	hsa-miR-2115	CLIP-seq
MIRT2643492	hsa-miR-3121-3p	CLIP-seq
MIRT2693269	hsa-miR-3159	CLIP-seq
MIRT2643493	hsa-miR-3187-3p	CLIP-seq
MIRT2643494	hsa-miR-3194-3p	CLIP-seq
MIRT2643495	hsa-miR-338-5p	CLIP-seq
MIRT2643497	hsa-miR-3613-5p	CLIP-seq
MIRT2643498	hsa-miR-3653	CLIP-seq
MIRT2643499	hsa-miR-3658	CLIP-seq
MIRT2643500	hsa-miR-374a	CLIP-seq
MIRT2643501	hsa-miR-374b	CLIP-seq
MIRT2643502	hsa-miR-382	CLIP-seq
MIRT2643504	hsa-miR-4286	CLIP-seq
MIRT2643505	hsa-miR-4423-5p	CLIP-seq
MIRT2643506	hsa-miR-4446-3p	CLIP-seq
MIRT2643507	hsa-miR-4480	CLIP-seq
MIRT2643509	hsa-miR-4529-5p	CLIP-seq
MIRT2643510	hsa-miR-4652-3p	CLIP-seq
MIRT2643511	hsa-miR-4670-3p	CLIP-seq
MIRT2643512	hsa-miR-4675	CLIP-seq
MIRT2643513	hsa-miR-4687-3p	CLIP-seq
MIRT2643514	hsa-miR-4721	CLIP-seq
MIRT2643515	hsa-miR-4729	CLIP-seq
MIRT2643516	hsa-miR-4735-3p	CLIP-seq
MIRT2643517	hsa-miR-4741	CLIP-seq
MIRT2693270	hsa-miR-4755-5p	CLIP-seq
MIRT2350047	hsa-miR-4761-5p	CLIP-seq
MIRT2643519	hsa-miR-483-3p	CLIP-seq
MIRT2643520	hsa-miR-518e	CLIP-seq
MIRT2643521	hsa-miR-548a-5p	CLIP-seq
MIRT2643522	hsa-miR-548ab	CLIP-seq
MIRT2643525	hsa-miR-548ak	CLIP-seq
MIRT2643527	hsa-miR-548an	CLIP-seq
MIRT2643528	hsa-miR-548b-5p	CLIP-seq
MIRT2643529	hsa-miR-548c-5p	CLIP-seq
MIRT2643530	hsa-miR-548d-5p	CLIP-seq
MIRT2643531	hsa-miR-548h	CLIP-seq
MIRT2643532	hsa-miR-548i	CLIP-seq
MIRT2643533	hsa-miR-548j	CLIP-seq
MIRT2643534	hsa-miR-548n	CLIP-seq
MIRT2643535	hsa-miR-548t	CLIP-seq
MIRT2643536	hsa-miR-548w	CLIP-seq
MIRT2643538	hsa-miR-548y	CLIP-seq
MIRT2643539	hsa-miR-559	CLIP-seq
MIRT2643540	hsa-miR-570	CLIP-seq
MIRT2643541	hsa-miR-579	CLIP-seq
MIRT2693271	hsa-miR-623	CLIP-seq
MIRT2643543	hsa-miR-646	CLIP-seq
MIRT2643544	hsa-miR-944	CLIP-seq

Show/Hide all (8)

GO ID	Ontology	Definition	Evidence
GO:0006811	Process	Monoatomic ion transport	IEA
GO:0006812	Process	Monoatomic cation transport	IEA
GO:0015297	Function	Antiporter activity	IEA
GO:0015386	Function	Potassium:proton antiporter activity	IEA
GO:0016020	Component	Membrane	IEA
GO:0055085	Process	Transmembrane transport	IEA
GO:0071805	Process	Potassium ion transmembrane transport	IEA
GO:1902600	Process	Proton transmembrane transport	IEA

MIM	HGNC	e!Ensembl
617134	20329	ENSG00000150403

Q6UWJ1

Protein name

Transmembrane and coiled-coil domain-containing protein 3 (Putative LAG1-interacting protein)

Protein function

Probable Na(+)/H(+) antiporter.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00999	Na_H_Exchanger	274 → 661	Sodium/hydrogen exchanger family	Family

Tissue specificity

TISSUE SPECIFICITY: Expressed in the cornea, lens capsule and choroid-retinal pigment epithelium (at protein level). {ECO:0000269|PubMed:27484837}.

Sequence

MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY
LIGPYYRKLHMESKGNKEILILGISAFIFLMLTVTELLDVSMELGCFLAGALVSSQGPVV
TEEIATSIEPIRDFLAIVFFASIGLHVFPTFVAYELTVLVFLTLSVVVMKFLLAALVLSL
ILPRSSQYIKWIVSAGLAQVSEFSFVLGSRARRAGVISREVYLLILSVTTLSLLLAPVLW
RAAITRCVPRPERRSSL

Sequence length

677

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (4)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
CARCINOMA, BASAL CELL	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Colon adenocarcinoma	Likely benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
FUCHS' ENDOTHELIAL DYSTROPHY	—	GenCC	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Sarcoma	Likely benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (3)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
CATARACT, ANTERIOR POLAR	Cataract	BEFREE	27484837		★★★★★ ★☆☆☆☆ Found in Text Mining only
Corneal guttata	Corneal guttata	BEFREE	27484837		★★★★★ ★☆☆☆☆ Found in Text Mining only
Corneal Injuries	Corneal injury	Pubtator	27484837	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

SLC9D1 (solute carrier family 9 member D1)