LPCAT2 (lysophosphatidylcholine acyltransferase 2)

Gene

• Entrez ID: 54947
• Gene name: Lysophosphatidylcholine acyltransferase 2
• Gene symbol: LPCAT2
• Synonyms (NCBI Gene): AGPAT11, AYTL1, LPLAT9, LysoPAFAT
• Chromosome: 16
• Chromosome location: 16q12.2
• Summary: This gene encodes a member of the lysophospholipid acyltransferase family. The encoded enzyme may function in two ways: to catalyze the biosynthesis of platelet-activating factor (1-O-alkyl-2-acetyl-sn-glycero-3-phosphocholine) from 1-O-alkyl-sn-glycero-3

SNPs

SNP ID	Visualize variation	Clinical significance	Consequence
rs1567390809	G>A	Pathogenic	Intron variant

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT1115653	hsa-let-7a	CLIP-seq
MIRT1115654	hsa-let-7b	CLIP-seq
MIRT1115655	hsa-let-7c	CLIP-seq
MIRT1115656	hsa-let-7d	CLIP-seq
MIRT1115657	hsa-let-7e	CLIP-seq
MIRT1115658	hsa-let-7f	CLIP-seq
MIRT1115659	hsa-let-7g	CLIP-seq
MIRT1115660	hsa-let-7i	CLIP-seq
MIRT1115661	hsa-miR-101	CLIP-seq
MIRT1115662	hsa-miR-1262	CLIP-seq
MIRT1115663	hsa-miR-1275	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT1115665	hsa-miR-142-5p	CLIP-seq
MIRT1115666	hsa-miR-144	CLIP-seq
MIRT1115667	hsa-miR-202	CLIP-seq
MIRT1115668	hsa-miR-2467-3p	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT1115671	hsa-miR-3163	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT1115674	hsa-miR-338-5p	CLIP-seq
MIRT1115675	hsa-miR-33a	CLIP-seq
MIRT1115676	hsa-miR-33b	CLIP-seq
MIRT1115677	hsa-miR-340	CLIP-seq
MIRT1115678	hsa-miR-34b	CLIP-seq
MIRT1115679	hsa-miR-3607-3p	CLIP-seq
MIRT1115680	hsa-miR-3612	CLIP-seq
MIRT1115681	hsa-miR-3614-5p	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115686	hsa-miR-3686	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT1115689	hsa-miR-374c	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT1115692	hsa-miR-410	CLIP-seq
MIRT1115693	hsa-miR-4257	CLIP-seq
MIRT1115694	hsa-miR-4274	CLIP-seq
MIRT1115695	hsa-miR-4294	CLIP-seq
MIRT1115696	hsa-miR-431	CLIP-seq
MIRT1115697	hsa-miR-4318	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115699	hsa-miR-4432	CLIP-seq
MIRT1115700	hsa-miR-4433	CLIP-seq
MIRT1115701	hsa-miR-4453	CLIP-seq
MIRT1115702	hsa-miR-4458	CLIP-seq
MIRT1115703	hsa-miR-4459	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT1115706	hsa-miR-4500	CLIP-seq
MIRT1115707	hsa-miR-4519	CLIP-seq
MIRT1115708	hsa-miR-451b	CLIP-seq
MIRT1115709	hsa-miR-4527	CLIP-seq
MIRT1115710	hsa-miR-4538	CLIP-seq
MIRT1115711	hsa-miR-4649-3p	CLIP-seq
MIRT1115712	hsa-miR-4665-5p	CLIP-seq
MIRT1115713	hsa-miR-4693-5p	CLIP-seq
MIRT1115714	hsa-miR-4694-3p	CLIP-seq
MIRT1115715	hsa-miR-4695-5p	CLIP-seq
MIRT1115716	hsa-miR-4696	CLIP-seq
MIRT1115717	hsa-miR-4701-3p	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT1115719	hsa-miR-4733-5p	CLIP-seq
MIRT1115720	hsa-miR-4768-3p	CLIP-seq
MIRT1115721	hsa-miR-4793-3p	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT1115723	hsa-miR-498	CLIP-seq
MIRT1115724	hsa-miR-508-5p	CLIP-seq
MIRT1115725	hsa-miR-511	CLIP-seq
MIRT1115726	hsa-miR-522	CLIP-seq
MIRT1115727	hsa-miR-542-3p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT1115729	hsa-miR-548a-5p	CLIP-seq
MIRT1115730	hsa-miR-548aa	CLIP-seq
MIRT1115731	hsa-miR-548ab	CLIP-seq
MIRT1115732	hsa-miR-548ak	CLIP-seq
MIRT1115733	hsa-miR-548b-5p	CLIP-seq
MIRT1115734	hsa-miR-548c-5p	CLIP-seq
MIRT1115735	hsa-miR-548d-5p	CLIP-seq
MIRT1115736	hsa-miR-548h	CLIP-seq
MIRT1115737	hsa-miR-548i	CLIP-seq
MIRT1115738	hsa-miR-548j	CLIP-seq
MIRT1115739	hsa-miR-548k	CLIP-seq
MIRT1115740	hsa-miR-548l	CLIP-seq
MIRT1115741	hsa-miR-548p	CLIP-seq
MIRT1115742	hsa-miR-548w	CLIP-seq
MIRT1115743	hsa-miR-548y	CLIP-seq
MIRT1115744	hsa-miR-559	CLIP-seq
MIRT1115745	hsa-miR-582-5p	CLIP-seq
MIRT1115746	hsa-miR-606	CLIP-seq
MIRT1115747	hsa-miR-650	CLIP-seq
MIRT1115748	hsa-miR-655	CLIP-seq
MIRT1115749	hsa-miR-661	CLIP-seq
MIRT1115750	hsa-miR-665	CLIP-seq
MIRT1115751	hsa-miR-766	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT1115753	hsa-miR-892a	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115756	hsa-miR-98	CLIP-seq
MIRT1550884	hsa-miR-380	CLIP-seq
MIRT1550885	hsa-miR-4495	CLIP-seq
MIRT1556627	hsa-miR-607	CLIP-seq
MIRT1115653	hsa-let-7a	CLIP-seq
MIRT1115654	hsa-let-7b	CLIP-seq
MIRT1115655	hsa-let-7c	CLIP-seq
MIRT1115656	hsa-let-7d	CLIP-seq
MIRT1115657	hsa-let-7e	CLIP-seq
MIRT1115658	hsa-let-7f	CLIP-seq
MIRT1115659	hsa-let-7g	CLIP-seq
MIRT1115660	hsa-let-7i	CLIP-seq
MIRT2032540	hsa-miR-1237	CLIP-seq
MIRT2032541	hsa-miR-1248	CLIP-seq
MIRT1115662	hsa-miR-1262	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT2032542	hsa-miR-181a	CLIP-seq
MIRT2032543	hsa-miR-181b	CLIP-seq
MIRT2032544	hsa-miR-181c	CLIP-seq
MIRT2032545	hsa-miR-181d	CLIP-seq
MIRT1115667	hsa-miR-202	CLIP-seq
MIRT2032546	hsa-miR-2113	CLIP-seq
MIRT2032547	hsa-miR-23a	CLIP-seq
MIRT2032548	hsa-miR-23b	CLIP-seq
MIRT2032549	hsa-miR-23c	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT2032550	hsa-miR-3145-3p	CLIP-seq
MIRT2032551	hsa-miR-3160-3p	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT2032552	hsa-miR-3192	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT2032553	hsa-miR-323-5p	CLIP-seq
MIRT1115678	hsa-miR-34b	CLIP-seq
MIRT1115680	hsa-miR-3612	CLIP-seq
MIRT2032554	hsa-miR-3613-3p	CLIP-seq
MIRT1115681	hsa-miR-3614-5p	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT2032555	hsa-miR-362-5p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT2032556	hsa-miR-3662	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT2032557	hsa-miR-421	CLIP-seq
MIRT2032558	hsa-miR-4262	CLIP-seq
MIRT2032559	hsa-miR-4282	CLIP-seq
MIRT1115695	hsa-miR-4294	CLIP-seq
MIRT2032560	hsa-miR-4314	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115700	hsa-miR-4433	CLIP-seq
MIRT1115702	hsa-miR-4458	CLIP-seq
MIRT1115703	hsa-miR-4459	CLIP-seq
MIRT2032561	hsa-miR-4470	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT2032562	hsa-miR-4487	CLIP-seq
MIRT1115706	hsa-miR-4500	CLIP-seq
MIRT1115708	hsa-miR-451b	CLIP-seq
MIRT2032563	hsa-miR-4646-5p	CLIP-seq
MIRT1115711	hsa-miR-4649-3p	CLIP-seq
MIRT1115715	hsa-miR-4695-5p	CLIP-seq
MIRT1115716	hsa-miR-4696	CLIP-seq
MIRT1115717	hsa-miR-4701-3p	CLIP-seq
MIRT2032564	hsa-miR-4719	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT1115720	hsa-miR-4768-3p	CLIP-seq
MIRT1115721	hsa-miR-4793-3p	CLIP-seq
MIRT2032565	hsa-miR-4803	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT2032566	hsa-miR-500b	CLIP-seq
MIRT2032567	hsa-miR-501-5p	CLIP-seq
MIRT1115724	hsa-miR-508-5p	CLIP-seq
MIRT2032568	hsa-miR-541	CLIP-seq
MIRT1115727	hsa-miR-542-3p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT1115730	hsa-miR-548aa	CLIP-seq
MIRT2032569	hsa-miR-548c-3p	CLIP-seq
MIRT2032570	hsa-miR-558	CLIP-seq
MIRT2032571	hsa-miR-579	CLIP-seq
MIRT2032572	hsa-miR-599	CLIP-seq
MIRT1115747	hsa-miR-650	CLIP-seq
MIRT2032573	hsa-miR-654-5p	CLIP-seq
MIRT1115749	hsa-miR-661	CLIP-seq
MIRT2032574	hsa-miR-664	CLIP-seq
MIRT1115750	hsa-miR-665	CLIP-seq
MIRT1115751	hsa-miR-766	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT2032575	hsa-miR-802	CLIP-seq
MIRT2032576	hsa-miR-876-3p	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115756	hsa-miR-98	CLIP-seq
MIRT1115662	hsa-miR-1262	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT2032542	hsa-miR-181a	CLIP-seq
MIRT2032543	hsa-miR-181b	CLIP-seq
MIRT2032544	hsa-miR-181c	CLIP-seq
MIRT2032545	hsa-miR-181d	CLIP-seq
MIRT1115668	hsa-miR-2467-3p	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT2263084	hsa-miR-27a	CLIP-seq
MIRT2263085	hsa-miR-27b	CLIP-seq
MIRT2263086	hsa-miR-3074-5p	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT2032551	hsa-miR-3160-3p	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT1115678	hsa-miR-34b	CLIP-seq
MIRT1115680	hsa-miR-3612	CLIP-seq
MIRT1115681	hsa-miR-3614-5p	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT2263087	hsa-miR-3926	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT1115693	hsa-miR-4257	CLIP-seq
MIRT2032558	hsa-miR-4262	CLIP-seq
MIRT2263088	hsa-miR-4320	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115699	hsa-miR-4432	CLIP-seq
MIRT1115700	hsa-miR-4433	CLIP-seq
MIRT1115703	hsa-miR-4459	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT2032562	hsa-miR-4487	CLIP-seq
MIRT1115708	hsa-miR-451b	CLIP-seq
MIRT2263089	hsa-miR-452	CLIP-seq
MIRT2263090	hsa-miR-4676-3p	CLIP-seq
MIRT1115713	hsa-miR-4693-5p	CLIP-seq
MIRT1115715	hsa-miR-4695-5p	CLIP-seq
MIRT1115716	hsa-miR-4696	CLIP-seq
MIRT1115717	hsa-miR-4701-3p	CLIP-seq
MIRT2263091	hsa-miR-4722-3p	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT1115720	hsa-miR-4768-3p	CLIP-seq
MIRT1115721	hsa-miR-4793-3p	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT1115724	hsa-miR-508-5p	CLIP-seq
MIRT2263092	hsa-miR-513a-5p	CLIP-seq
MIRT1115727	hsa-miR-542-3p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT2263093	hsa-miR-548s	CLIP-seq
MIRT2032570	hsa-miR-558	CLIP-seq
MIRT1115747	hsa-miR-650	CLIP-seq
MIRT1115749	hsa-miR-661	CLIP-seq
MIRT1115750	hsa-miR-665	CLIP-seq
MIRT1115751	hsa-miR-766	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115653	hsa-let-7a	CLIP-seq
MIRT1115654	hsa-let-7b	CLIP-seq
MIRT1115655	hsa-let-7c	CLIP-seq
MIRT1115656	hsa-let-7d	CLIP-seq
MIRT1115657	hsa-let-7e	CLIP-seq
MIRT1115658	hsa-let-7f	CLIP-seq
MIRT1115659	hsa-let-7g	CLIP-seq
MIRT1115660	hsa-let-7i	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT1115667	hsa-miR-202	CLIP-seq
MIRT2032546	hsa-miR-2113	CLIP-seq
MIRT1115668	hsa-miR-2467-3p	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT2032550	hsa-miR-3145-3p	CLIP-seq
MIRT2032551	hsa-miR-3160-3p	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT2032552	hsa-miR-3192	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT1115678	hsa-miR-34b	CLIP-seq
MIRT1115680	hsa-miR-3612	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT1115693	hsa-miR-4257	CLIP-seq
MIRT2032560	hsa-miR-4314	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115700	hsa-miR-4433	CLIP-seq
MIRT1115702	hsa-miR-4458	CLIP-seq
MIRT1115703	hsa-miR-4459	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT2032562	hsa-miR-4487	CLIP-seq
MIRT1115706	hsa-miR-4500	CLIP-seq
MIRT2032563	hsa-miR-4646-5p	CLIP-seq
MIRT1115711	hsa-miR-4649-3p	CLIP-seq
MIRT1115715	hsa-miR-4695-5p	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT1115720	hsa-miR-4768-3p	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT2032570	hsa-miR-558	CLIP-seq
MIRT2032572	hsa-miR-599	CLIP-seq
MIRT1115747	hsa-miR-650	CLIP-seq
MIRT1115750	hsa-miR-665	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115756	hsa-miR-98	CLIP-seq
MIRT2453232	hsa-miR-1228	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT2032554	hsa-miR-3613-3p	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT2453233	hsa-miR-371-5p	CLIP-seq
MIRT2453234	hsa-miR-371b-5p	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115699	hsa-miR-4432	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT1115721	hsa-miR-4793-3p	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT1115724	hsa-miR-508-5p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT2453235	hsa-miR-548ae	CLIP-seq
MIRT2453236	hsa-miR-548aj	CLIP-seq
MIRT2453237	hsa-miR-548am	CLIP-seq
MIRT2453238	hsa-miR-548x	CLIP-seq
MIRT1115749	hsa-miR-661	CLIP-seq
MIRT1115751	hsa-miR-766	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115653	hsa-let-7a	CLIP-seq
MIRT1115654	hsa-let-7b	CLIP-seq
MIRT1115655	hsa-let-7c	CLIP-seq
MIRT1115656	hsa-let-7d	CLIP-seq
MIRT1115657	hsa-let-7e	CLIP-seq
MIRT1115658	hsa-let-7f	CLIP-seq
MIRT1115659	hsa-let-7g	CLIP-seq
MIRT1115660	hsa-let-7i	CLIP-seq
MIRT2453232	hsa-miR-1228	CLIP-seq
MIRT1115662	hsa-miR-1262	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT1115667	hsa-miR-202	CLIP-seq
MIRT1115668	hsa-miR-2467-3p	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT2032551	hsa-miR-3160-3p	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT2562502	hsa-miR-3175	CLIP-seq
MIRT2032552	hsa-miR-3192	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT1115678	hsa-miR-34b	CLIP-seq
MIRT1115680	hsa-miR-3612	CLIP-seq
MIRT2032554	hsa-miR-3613-3p	CLIP-seq
MIRT1115681	hsa-miR-3614-5p	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT2562503	hsa-miR-3646	CLIP-seq
MIRT2032556	hsa-miR-3662	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT2453233	hsa-miR-371-5p	CLIP-seq
MIRT2453234	hsa-miR-371b-5p	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT2263087	hsa-miR-3926	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT1115693	hsa-miR-4257	CLIP-seq
MIRT2032560	hsa-miR-4314	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115699	hsa-miR-4432	CLIP-seq
MIRT1115700	hsa-miR-4433	CLIP-seq
MIRT1115702	hsa-miR-4458	CLIP-seq
MIRT1115703	hsa-miR-4459	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT2032562	hsa-miR-4487	CLIP-seq
MIRT1115706	hsa-miR-4500	CLIP-seq
MIRT1115708	hsa-miR-451b	CLIP-seq
MIRT2032563	hsa-miR-4646-5p	CLIP-seq
MIRT1115715	hsa-miR-4695-5p	CLIP-seq
MIRT1115716	hsa-miR-4696	CLIP-seq
MIRT1115717	hsa-miR-4701-3p	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT1115720	hsa-miR-4768-3p	CLIP-seq
MIRT1115721	hsa-miR-4793-3p	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT1115724	hsa-miR-508-5p	CLIP-seq
MIRT2562504	hsa-miR-526b	CLIP-seq
MIRT1115727	hsa-miR-542-3p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT2263093	hsa-miR-548s	CLIP-seq
MIRT2032570	hsa-miR-558	CLIP-seq
MIRT1115747	hsa-miR-650	CLIP-seq
MIRT1115749	hsa-miR-661	CLIP-seq
MIRT1115750	hsa-miR-665	CLIP-seq
MIRT1115751	hsa-miR-766	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115756	hsa-miR-98	CLIP-seq
MIRT1115653	hsa-let-7a	CLIP-seq
MIRT1115654	hsa-let-7b	CLIP-seq
MIRT1115655	hsa-let-7c	CLIP-seq
MIRT1115656	hsa-let-7d	CLIP-seq
MIRT1115657	hsa-let-7e	CLIP-seq
MIRT1115658	hsa-let-7f	CLIP-seq
MIRT1115659	hsa-let-7g	CLIP-seq
MIRT1115660	hsa-let-7i	CLIP-seq
MIRT2453232	hsa-miR-1228	CLIP-seq
MIRT1115662	hsa-miR-1262	CLIP-seq
MIRT1115664	hsa-miR-1293	CLIP-seq
MIRT1115667	hsa-miR-202	CLIP-seq
MIRT2684081	hsa-miR-2052	CLIP-seq
MIRT1115668	hsa-miR-2467-3p	CLIP-seq
MIRT1115669	hsa-miR-25	CLIP-seq
MIRT1115670	hsa-miR-3122	CLIP-seq
MIRT2032551	hsa-miR-3160-3p	CLIP-seq
MIRT1115672	hsa-miR-3165	CLIP-seq
MIRT2562502	hsa-miR-3175	CLIP-seq
MIRT2032552	hsa-miR-3192	CLIP-seq
MIRT1115673	hsa-miR-32	CLIP-seq
MIRT1115678	hsa-miR-34b	CLIP-seq
MIRT1115680	hsa-miR-3612	CLIP-seq
MIRT2032554	hsa-miR-3613-3p	CLIP-seq
MIRT1115681	hsa-miR-3614-5p	CLIP-seq
MIRT1115682	hsa-miR-3622a-3p	CLIP-seq
MIRT1115683	hsa-miR-3622b-3p	CLIP-seq
MIRT1115684	hsa-miR-363	CLIP-seq
MIRT2562503	hsa-miR-3646	CLIP-seq
MIRT2032556	hsa-miR-3662	CLIP-seq
MIRT1115685	hsa-miR-367	CLIP-seq
MIRT1115687	hsa-miR-3689a-3p	CLIP-seq
MIRT1115688	hsa-miR-3689c	CLIP-seq
MIRT2453233	hsa-miR-371-5p	CLIP-seq
MIRT2453234	hsa-miR-371b-5p	CLIP-seq
MIRT1115690	hsa-miR-3913-5p	CLIP-seq
MIRT2263087	hsa-miR-3926	CLIP-seq
MIRT1115691	hsa-miR-3929	CLIP-seq
MIRT1115693	hsa-miR-4257	CLIP-seq
MIRT2032560	hsa-miR-4314	CLIP-seq
MIRT1115698	hsa-miR-4419b	CLIP-seq
MIRT1115699	hsa-miR-4432	CLIP-seq
MIRT1115700	hsa-miR-4433	CLIP-seq
MIRT1115702	hsa-miR-4458	CLIP-seq
MIRT1115703	hsa-miR-4459	CLIP-seq
MIRT2032561	hsa-miR-4470	CLIP-seq
MIRT1115704	hsa-miR-4478	CLIP-seq
MIRT1115705	hsa-miR-4483	CLIP-seq
MIRT2032562	hsa-miR-4487	CLIP-seq
MIRT1115706	hsa-miR-4500	CLIP-seq
MIRT1115708	hsa-miR-451b	CLIP-seq
MIRT2263089	hsa-miR-452	CLIP-seq
MIRT2032563	hsa-miR-4646-5p	CLIP-seq
MIRT2263090	hsa-miR-4676-3p	CLIP-seq
MIRT1115715	hsa-miR-4695-5p	CLIP-seq
MIRT1115716	hsa-miR-4696	CLIP-seq
MIRT1115717	hsa-miR-4701-3p	CLIP-seq
MIRT2684082	hsa-miR-4714-5p	CLIP-seq
MIRT2684083	hsa-miR-4717-3p	CLIP-seq
MIRT1115718	hsa-miR-4728-5p	CLIP-seq
MIRT2684084	hsa-miR-4735-5p	CLIP-seq
MIRT1115720	hsa-miR-4768-3p	CLIP-seq
MIRT1115721	hsa-miR-4793-3p	CLIP-seq
MIRT1115722	hsa-miR-485-5p	CLIP-seq
MIRT1115724	hsa-miR-508-5p	CLIP-seq
MIRT2562504	hsa-miR-526b	CLIP-seq
MIRT1115727	hsa-miR-542-3p	CLIP-seq
MIRT1115728	hsa-miR-544b	CLIP-seq
MIRT1115730	hsa-miR-548aa	CLIP-seq
MIRT2032569	hsa-miR-548c-3p	CLIP-seq
MIRT2263093	hsa-miR-548s	CLIP-seq
MIRT2032570	hsa-miR-558	CLIP-seq
MIRT2684085	hsa-miR-576-5p	CLIP-seq
MIRT1115747	hsa-miR-650	CLIP-seq
MIRT1115749	hsa-miR-661	CLIP-seq
MIRT1115750	hsa-miR-665	CLIP-seq
MIRT1115751	hsa-miR-766	CLIP-seq
MIRT1115752	hsa-miR-767-5p	CLIP-seq
MIRT1115754	hsa-miR-92a	CLIP-seq
MIRT1115755	hsa-miR-92b	CLIP-seq
MIRT1115756	hsa-miR-98	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000139	Component	Golgi membrane	IEA
GO:0003841	Function	1-acylglycerol-3-phosphate O-acyltransferase activity	IDA	20363836
GO:0003841	Function	1-acylglycerol-3-phosphate O-acyltransferase activity	IEA
GO:0003841	Function	1-acylglycerol-3-phosphate O-acyltransferase activity	TAS
GO:0005509	Function	Calcium ion binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005783	Component	Endoplasmic reticulum	IBA
GO:0005783	Component	Endoplasmic reticulum	IDA	21498505
GO:0005783	Component	Endoplasmic reticulum	IEA
GO:0005783	Component	Endoplasmic reticulum	ISS
GO:0005789	Component	Endoplasmic reticulum membrane	IDA	20363836
GO:0005789	Component	Endoplasmic reticulum membrane	IEA
GO:0005789	Component	Endoplasmic reticulum membrane	TAS
GO:0005794	Component	Golgi apparatus	IEA
GO:0005795	Component	Golgi stack	IEA
GO:0005795	Component	Golgi stack	ISS
GO:0005811	Component	Lipid droplet	IDA	21498505
GO:0005811	Component	Lipid droplet	IEA
GO:0005886	Component	Plasma membrane	IEA
GO:0006629	Process	Lipid metabolic process	IEA
GO:0006644	Process	Phospholipid metabolic process	IEA
GO:0006650	Process	Glycerophospholipid metabolic process	IEA
GO:0006663	Process	Platelet activating factor biosynthetic process	IEA
GO:0006663	Process	Platelet activating factor biosynthetic process	ISS
GO:0008374	Function	O-acyltransferase activity	IEA
GO:0008654	Process	Phospholipid biosynthetic process	IEA
GO:0016020	Component	Membrane	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0016746	Function	Acyltransferase activity	IEA
GO:0031984	Component	Organelle subcompartment	IEA
GO:0036151	Process	Phosphatidylcholine acyl-chain remodeling	IDA	21498505
GO:0036151	Process	Phosphatidylcholine acyl-chain remodeling	TAS
GO:0042171	Function	Lysophosphatidic acid acyltransferase activity	IBA
GO:0042171	Function	Lysophosphatidic acid acyltransferase activity	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:0047144	Function	2-acylglycerol-3-phosphate O-acyltransferase activity	TAS
GO:0047159	Function	Plasmalogen synthase activity	IEA
GO:0047184	Function	1-acylglycerophosphocholine O-acyltransferase activity	IDA	21498505
GO:0047184	Function	1-acylglycerophosphocholine O-acyltransferase activity	IEA
GO:0047184	Function	1-acylglycerophosphocholine O-acyltransferase activity	ISS
GO:0047192	Function	1-alkylglycerophosphocholine O-acetyltransferase activity	IEA
GO:0047192	Function	1-alkylglycerophosphocholine O-acetyltransferase activity	ISS
GO:0061024	Process	Membrane organization	IEA
GO:0061024	Process	Membrane organization	ISS

Other IDs

• MIM: 612040
• HGNC: 26032
• e!Ensembl: ENSG00000087253

Protein

• UniProt ID: Q7L5N7
• Protein name: Lysophosphatidylcholine acyltransferase 2 (LPC acyltransferase 2) (LPCAT-2) (LysoPC acyltransferase 2) (EC 2.3.1.23) (1-acylglycerol-3-phosphate O-acyltransferase 11) (1-AGP acyltransferase 11) (1-AGPAT 11) (EC 2.3.1.51) (1-acylglycerophosphocholine O-acy
• Protein function: Exhibits both acyltransferase and acetyltransferase activities (PubMed:17182612, PubMed:20363836, PubMed:21498505). Catalyzes the conversion of lysophosphatidylcholine (1-acyl-sn-glycero-3-phosphocholine or LPC) into phosphatidylcholine (1,2-dia
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01553	Acyltransferase	125 → 248	Acyltransferase	Family
  PF13202	EF-hand_5	396 → 418	EF hand	Domain
  PF00036	EF-hand_1	432 → 460	EF hand	Domain

• Sequence:

  MSRCAQAAEVAATVPGAGVGNVGLRPPMVPRQASFFPPPVPNPFVQQTQIGSARRVQIVL
  LGIILLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKITQTALKFLGRAMFF
  SMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVSRNENAQVPLIGRLLR
  AVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCTNRSCLITFKPGAFIPG
  VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVEFMPVQVPNDEEKNDPV
  LFANKVRNLMAEALGIPVTDHTYEDCRLMISAGQLTLPMEAGLVEFTKISRKLKLDWDGV
  RKHLDEYASIASSSKGGRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFREYVIGL
  AVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDS
  ISYEEFKSFALKHPEYAKIFTTYLDLQTCHVFSLPKEVQTTPSTASNKVSPEKHEESTSD
  KKDD

• Sequence length: 544

Pathways

KEGG:

Glycerophospholipid metabolism
Ether lipid metabolism
Metabolic pathways

Reactome:

Acyl chain remodelling of PC

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Multicentric osteolysis nodulosis arthropathy spectrum	Pathogenic	rs1567390809	RCV000767860	★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
CARDIAC EMBOLISM	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CARDIOEMBOLIC STROKE	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
POLYCYSTIC OVARY SYNDROME	—	CTD, Disgenet CTD, Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TORG-WINCHESTER SYNDROME	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
ANOPHTHALMIA AND PULMONARY HYPOPLASIA	Syndromic microphthalmia	BEFREE	29660218		★☆☆☆☆ Found in Text Mining only
Carcinoma Pancreatic Ductal	Pancreatic ductal carcinoma	Pubtator	29660218	Associate	★☆☆☆☆ Found in Text Mining only
Colorectal Carcinoma	Colorectal Cancer	BEFREE	29358673		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	BEFREE	25411967		★☆☆☆☆ Found in Text Mining only
Melanoma	Melanoma	Pubtator	34171470	Associate	★☆☆☆☆ Found in Text Mining only
Polycystic Ovary Syndrome	Polycystic Ovary Syndrome	CTD_human_DG	21411543		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Prostate carcinoma	Prostate cancer	BEFREE	25411967		★☆☆☆☆ Found in Text Mining only
Sclerocystic Ovaries	Sclerocystic Ovaries	CTD_human_DG	21411543		★☆☆☆☆ Found in Text Mining only
TORG-WINCHESTER SYNDROME	TORG-WINCHESTER SYNDROME	CLINVAR_DG			★★☆☆☆ Found in Text Mining + Unknown/Other Associations