SLC38A12 (solute carrier family 38 member 12)

Gene

• Entrez ID: 54868
• Gene name: Solute carrier family 38 member 12
• Gene symbol: SLC38A12
• Synonyms (NCBI Gene): TMEM104
• Chromosome: 17
• Chromosome location: 17q25.1

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT022835	hsa-miR-124-3p	Microarray	18668037
MIRT022835	hsa-miR-124-3p	PAR-CLIP	20371350
MIRT234598	hsa-miR-3154	PAR-CLIP	20371350
MIRT565340	hsa-miR-3622a-5p	PAR-CLIP	20371350
MIRT565339	hsa-miR-936	PAR-CLIP	20371350
MIRT565338	hsa-miR-605-3p	PAR-CLIP	20371350
MIRT565336	hsa-miR-2467-3p	PAR-CLIP	20371350
MIRT565337	hsa-miR-3678-3p	PAR-CLIP	20371350
MIRT439447	hsa-miR-1185-2-3p	HITS-CLIP	24374217
MIRT439446	hsa-miR-1185-1-3p	HITS-CLIP	24374217
MIRT439447	hsa-miR-1185-2-3p	HITS-CLIP	24374217
MIRT439446	hsa-miR-1185-1-3p	HITS-CLIP	24374217
MIRT022835	hsa-miR-124-3p	PAR-CLIP	20371350
MIRT234598	hsa-miR-3154	PAR-CLIP	20371350
MIRT565340	hsa-miR-3622a-5p	PAR-CLIP	20371350
MIRT565339	hsa-miR-936	PAR-CLIP	20371350
MIRT565338	hsa-miR-605-3p	PAR-CLIP	20371350
MIRT565336	hsa-miR-2467-3p	PAR-CLIP	20371350
MIRT565337	hsa-miR-3678-3p	PAR-CLIP	20371350
MIRT1429465	hsa-miR-1207-5p	CLIP-seq
MIRT1429466	hsa-miR-122	CLIP-seq
MIRT1429467	hsa-miR-145	CLIP-seq
MIRT1429468	hsa-miR-193a-3p	CLIP-seq
MIRT1429469	hsa-miR-193b	CLIP-seq
MIRT1429470	hsa-miR-298	CLIP-seq
MIRT1429471	hsa-miR-3151	CLIP-seq
MIRT1429472	hsa-miR-3198	CLIP-seq
MIRT1429473	hsa-miR-338-3p	CLIP-seq
MIRT1429474	hsa-miR-3616-3p	CLIP-seq
MIRT1429475	hsa-miR-3622a-3p	CLIP-seq
MIRT1429476	hsa-miR-3622b-3p	CLIP-seq
MIRT1429477	hsa-miR-3689a-3p	CLIP-seq
MIRT1429478	hsa-miR-3689c	CLIP-seq
MIRT1429479	hsa-miR-4283	CLIP-seq
MIRT1429480	hsa-miR-4293	CLIP-seq
MIRT1429481	hsa-miR-4300	CLIP-seq
MIRT1429482	hsa-miR-4309	CLIP-seq
MIRT1429483	hsa-miR-4435	CLIP-seq
MIRT1429484	hsa-miR-4436b-3p	CLIP-seq
MIRT1429485	hsa-miR-4481	CLIP-seq
MIRT1429486	hsa-miR-4489	CLIP-seq
MIRT1429487	hsa-miR-4514	CLIP-seq
MIRT1429488	hsa-miR-4645-5p	CLIP-seq
MIRT1429489	hsa-miR-4673	CLIP-seq
MIRT1429490	hsa-miR-4691-3p	CLIP-seq
MIRT1429491	hsa-miR-4692	CLIP-seq
MIRT1429492	hsa-miR-4712-5p	CLIP-seq
MIRT1429493	hsa-miR-4736	CLIP-seq
MIRT1429494	hsa-miR-4745-5p	CLIP-seq
MIRT1429495	hsa-miR-4763-3p	CLIP-seq
MIRT1429496	hsa-miR-486-3p	CLIP-seq
MIRT1429497	hsa-miR-548k	CLIP-seq
MIRT1429498	hsa-miR-627	CLIP-seq
MIRT1429499	hsa-miR-770-5p	CLIP-seq
MIRT1429500	hsa-miR-885-3p	CLIP-seq
MIRT1429501	hsa-miR-920	CLIP-seq
MIRT1429502	hsa-miR-922	CLIP-seq
MIRT1429503	hsa-miR-924	CLIP-seq
MIRT1429479	hsa-miR-4283	CLIP-seq
MIRT2128677	hsa-miR-1236	CLIP-seq
MIRT2128678	hsa-miR-1281	CLIP-seq
MIRT2128679	hsa-miR-1302	CLIP-seq
MIRT2128680	hsa-miR-135a	CLIP-seq
MIRT2128681	hsa-miR-135b	CLIP-seq
MIRT2128682	hsa-miR-141	CLIP-seq
MIRT2128683	hsa-miR-193a-5p	CLIP-seq
MIRT2128684	hsa-miR-200a	CLIP-seq
MIRT2128685	hsa-miR-22	CLIP-seq
MIRT2128686	hsa-miR-2276	CLIP-seq
MIRT2128687	hsa-miR-2392	CLIP-seq
MIRT1429470	hsa-miR-298	CLIP-seq
MIRT2128688	hsa-miR-3144-5p	CLIP-seq
MIRT2128689	hsa-miR-3150a-3p	CLIP-seq
MIRT2128690	hsa-miR-3175	CLIP-seq
MIRT2128691	hsa-miR-3182	CLIP-seq
MIRT2128692	hsa-miR-3184	CLIP-seq
MIRT2128693	hsa-miR-3191	CLIP-seq
MIRT2128694	hsa-miR-3192	CLIP-seq
MIRT1429473	hsa-miR-338-3p	CLIP-seq
MIRT1429475	hsa-miR-3622a-3p	CLIP-seq
MIRT1429476	hsa-miR-3622b-3p	CLIP-seq
MIRT2128695	hsa-miR-3622b-5p	CLIP-seq
MIRT2128696	hsa-miR-3661	CLIP-seq
MIRT2128697	hsa-miR-3675-5p	CLIP-seq
MIRT1429477	hsa-miR-3689a-3p	CLIP-seq
MIRT1429478	hsa-miR-3689c	CLIP-seq
MIRT2128698	hsa-miR-378g	CLIP-seq
MIRT2128699	hsa-miR-423-5p	CLIP-seq
MIRT2128700	hsa-miR-4253	CLIP-seq
MIRT2128701	hsa-miR-4257	CLIP-seq
MIRT2128702	hsa-miR-4275	CLIP-seq
MIRT1429479	hsa-miR-4283	CLIP-seq
MIRT2128703	hsa-miR-4298	CLIP-seq
MIRT1429481	hsa-miR-4300	CLIP-seq
MIRT2128704	hsa-miR-4314	CLIP-seq
MIRT2128705	hsa-miR-4437	CLIP-seq
MIRT2128706	hsa-miR-4450	CLIP-seq
MIRT2128707	hsa-miR-4456	CLIP-seq
MIRT2128708	hsa-miR-4462	CLIP-seq
MIRT2128709	hsa-miR-4480	CLIP-seq
MIRT1429486	hsa-miR-4489	CLIP-seq
MIRT1429487	hsa-miR-4514	CLIP-seq
MIRT1429488	hsa-miR-4645-5p	CLIP-seq
MIRT2128710	hsa-miR-4646-5p	CLIP-seq
MIRT2128711	hsa-miR-4652-5p	CLIP-seq
MIRT2128712	hsa-miR-4656	CLIP-seq
MIRT2128713	hsa-miR-4663	CLIP-seq
MIRT1429489	hsa-miR-4673	CLIP-seq
MIRT2128714	hsa-miR-4688	CLIP-seq
MIRT1429490	hsa-miR-4691-3p	CLIP-seq
MIRT1429491	hsa-miR-4692	CLIP-seq
MIRT2128715	hsa-miR-4712-3p	CLIP-seq
MIRT2128716	hsa-miR-4722-5p	CLIP-seq
MIRT2128717	hsa-miR-4726-3p	CLIP-seq
MIRT2128718	hsa-miR-4728-5p	CLIP-seq
MIRT2128719	hsa-miR-4755-3p	CLIP-seq
MIRT2128720	hsa-miR-4768-3p	CLIP-seq
MIRT2128721	hsa-miR-4772-3p	CLIP-seq
MIRT2128722	hsa-miR-4794	CLIP-seq
MIRT1429496	hsa-miR-486-3p	CLIP-seq
MIRT2128723	hsa-miR-491-5p	CLIP-seq
MIRT2128724	hsa-miR-492	CLIP-seq
MIRT2128725	hsa-miR-513a-5p	CLIP-seq
MIRT2128726	hsa-miR-539	CLIP-seq
MIRT2128727	hsa-miR-541	CLIP-seq
MIRT2128728	hsa-miR-622	CLIP-seq
MIRT2128729	hsa-miR-631	CLIP-seq
MIRT2128730	hsa-miR-654-5p	CLIP-seq
MIRT2128731	hsa-miR-760	CLIP-seq
MIRT2128732	hsa-miR-767-3p	CLIP-seq
MIRT1429501	hsa-miR-920	CLIP-seq
MIRT2128733	hsa-miR-939	CLIP-seq
MIRT2350195	hsa-miR-1183	CLIP-seq
MIRT2350196	hsa-miR-1197	CLIP-seq
MIRT2350197	hsa-miR-1224-3p	CLIP-seq
MIRT2350198	hsa-miR-1254	CLIP-seq
MIRT2350199	hsa-miR-125a-5p	CLIP-seq
MIRT2350200	hsa-miR-125b	CLIP-seq
MIRT2350201	hsa-miR-214	CLIP-seq
MIRT2350202	hsa-miR-3116	CLIP-seq
MIRT2350203	hsa-miR-3120-3p	CLIP-seq
MIRT2350204	hsa-miR-3194-5p	CLIP-seq
MIRT1429473	hsa-miR-338-3p	CLIP-seq
MIRT2350205	hsa-miR-3619-5p	CLIP-seq
MIRT1429475	hsa-miR-3622a-3p	CLIP-seq
MIRT1429476	hsa-miR-3622b-3p	CLIP-seq
MIRT2350206	hsa-miR-4266	CLIP-seq
MIRT1429479	hsa-miR-4283	CLIP-seq
MIRT2350207	hsa-miR-4319	CLIP-seq
MIRT2350208	hsa-miR-4459	CLIP-seq
MIRT1429486	hsa-miR-4489	CLIP-seq
MIRT2350209	hsa-miR-4505	CLIP-seq
MIRT2128712	hsa-miR-4656	CLIP-seq
MIRT2350210	hsa-miR-4674	CLIP-seq
MIRT2350211	hsa-miR-4695-5p	CLIP-seq
MIRT2128716	hsa-miR-4722-5p	CLIP-seq
MIRT2128718	hsa-miR-4728-5p	CLIP-seq
MIRT2350212	hsa-miR-4779	CLIP-seq
MIRT2350213	hsa-miR-4793-3p	CLIP-seq
MIRT2350214	hsa-miR-600	CLIP-seq
MIRT2350215	hsa-miR-661	CLIP-seq
MIRT2350216	hsa-miR-761	CLIP-seq
MIRT1429471	hsa-miR-3151	CLIP-seq
MIRT1429473	hsa-miR-338-3p	CLIP-seq
MIRT2395915	hsa-miR-361-3p	CLIP-seq
MIRT1429475	hsa-miR-3622a-3p	CLIP-seq
MIRT1429476	hsa-miR-3622b-3p	CLIP-seq
MIRT1429479	hsa-miR-4283	CLIP-seq
MIRT1429486	hsa-miR-4489	CLIP-seq
MIRT2461600	hsa-miR-1298	CLIP-seq
MIRT2461601	hsa-miR-3647-3p	CLIP-seq
MIRT2461602	hsa-miR-4444	CLIP-seq
MIRT2461600	hsa-miR-1298	CLIP-seq
MIRT2461601	hsa-miR-3647-3p	CLIP-seq
MIRT2461602	hsa-miR-4444	CLIP-seq
MIRT2693291	hsa-let-7a	CLIP-seq
MIRT2693292	hsa-let-7b	CLIP-seq
MIRT2693293	hsa-let-7c	CLIP-seq
MIRT2693294	hsa-let-7d	CLIP-seq
MIRT2693295	hsa-let-7e	CLIP-seq
MIRT2693296	hsa-let-7f	CLIP-seq
MIRT2693297	hsa-let-7g	CLIP-seq
MIRT2693298	hsa-let-7i	CLIP-seq
MIRT2350197	hsa-miR-1224-3p	CLIP-seq
MIRT2693299	hsa-miR-1260	CLIP-seq
MIRT2693300	hsa-miR-1260b	CLIP-seq
MIRT2693301	hsa-miR-1273e	CLIP-seq
MIRT2693302	hsa-miR-1280	CLIP-seq
MIRT2128682	hsa-miR-141	CLIP-seq
MIRT2693303	hsa-miR-1913	CLIP-seq
MIRT2693304	hsa-miR-192	CLIP-seq
MIRT2128684	hsa-miR-200a	CLIP-seq
MIRT2693305	hsa-miR-215	CLIP-seq
MIRT2128686	hsa-miR-2276	CLIP-seq
MIRT2693306	hsa-miR-296-5p	CLIP-seq
MIRT2693307	hsa-miR-3130-3p	CLIP-seq
MIRT2128688	hsa-miR-3144-5p	CLIP-seq
MIRT1429471	hsa-miR-3151	CLIP-seq
MIRT2693308	hsa-miR-3176	CLIP-seq
MIRT2693309	hsa-miR-3190	CLIP-seq
MIRT2128693	hsa-miR-3191	CLIP-seq
MIRT2693310	hsa-miR-3202	CLIP-seq
MIRT2693311	hsa-miR-324-3p	CLIP-seq
MIRT2693312	hsa-miR-328	CLIP-seq
MIRT2693313	hsa-miR-3591-3p	CLIP-seq
MIRT2693314	hsa-miR-3620	CLIP-seq
MIRT2128696	hsa-miR-3661	CLIP-seq
MIRT2693315	hsa-miR-3922-3p	CLIP-seq
MIRT2693316	hsa-miR-3925-3p	CLIP-seq
MIRT2693317	hsa-miR-409-5p	CLIP-seq
MIRT2693318	hsa-miR-4252	CLIP-seq
MIRT2693319	hsa-miR-4313	CLIP-seq
MIRT2693320	hsa-miR-4436a	CLIP-seq
MIRT2693321	hsa-miR-4458	CLIP-seq
MIRT2128708	hsa-miR-4462	CLIP-seq
MIRT2693322	hsa-miR-4500	CLIP-seq
MIRT2693323	hsa-miR-4530	CLIP-seq
MIRT2693324	hsa-miR-4533	CLIP-seq
MIRT2693325	hsa-miR-4640-5p	CLIP-seq
MIRT2128711	hsa-miR-4652-5p	CLIP-seq
MIRT2128712	hsa-miR-4656	CLIP-seq
MIRT2128713	hsa-miR-4663	CLIP-seq
MIRT2128715	hsa-miR-4712-3p	CLIP-seq
MIRT2693326	hsa-miR-4713-3p	CLIP-seq
MIRT2693327	hsa-miR-4725-5p	CLIP-seq
MIRT2128717	hsa-miR-4726-3p	CLIP-seq
MIRT2693328	hsa-miR-4726-5p	CLIP-seq
MIRT2128718	hsa-miR-4728-5p	CLIP-seq
MIRT2128719	hsa-miR-4755-3p	CLIP-seq
MIRT2128721	hsa-miR-4772-3p	CLIP-seq
MIRT2693329	hsa-miR-4786-5p	CLIP-seq
MIRT2128723	hsa-miR-491-5p	CLIP-seq
MIRT2693330	hsa-miR-504	CLIP-seq
MIRT2693331	hsa-miR-532-3p	CLIP-seq
MIRT2128726	hsa-miR-539	CLIP-seq
MIRT2693332	hsa-miR-552	CLIP-seq
MIRT2128728	hsa-miR-622	CLIP-seq
MIRT2128729	hsa-miR-631	CLIP-seq
MIRT2693333	hsa-miR-658	CLIP-seq
MIRT2693334	hsa-miR-665	CLIP-seq
MIRT2693335	hsa-miR-769-5p	CLIP-seq
MIRT2693336	hsa-miR-98	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003674	Function	Molecular_function	ND
GO:0005575	Component	Cellular_component	ND
GO:0008150	Process	Biological_process	ND
GO:0016020	Component	Membrane	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q8NE00
• Protein name: Transmembrane protein 104
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01490	Aa_trans	13 → 78	Transmembrane amino acid transporter protein	Family
  PF01490	Aa_trans	128 → 490	Transmembrane amino acid transporter protein	Family

• Sequence:

  MAGEITETGELYSSYVGLVYMFNLIVGTGALTMPKAFATAGWLVSLVLLVFLGFMSFVTT
  TFVIEAMAAANAQLHWKRMENLKEEEDDDSSTASDSDVLIRDNYERAEKRPILSVQRRGS
  PNPFEITDRVEMGQMASMFFNKVGVNLFYFCIIVYLYGDLAIYAAAVPFSLMQVTCSATG
  NDSCGVEADTKYNDTDRCWGPLRRVDAYRIYLAIFTLLLGPFTFFDVQKTKYLQILTSLM
  RWIAFAVMIVLALIRIGHGQGEGHPPLADFSGVRNLFGVCVYSFMCQHSLPSLITPVSSK
  RHLTRLVFLDYVLILAFYGLLSFTAIFCFRGDSLMDMYTLNFARCDVVGLAAVRFFLGLF
  PVFTISTNFPIIAVTLRNNWKTLFHREGGTYPWVVDRVVFPTITLVPPVLVAFCTHDLES
  LVGITGAYAGTGIQYVIPAFLVYHCRRDTQLAFGCGVSNKHRSPFRHTFWVGFVLLWAFS
  CFIFVTANIILSETKL

• Sequence length: 496

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
CARCINOMA, BASAL CELL	—	CTD	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Colon adenocarcinoma	Likely benign	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
COMPLEX NEURODEVELOPMENTAL DISORDER	—	GenCC	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
NON-SPECIFIC SYNDROMIC INTELLECTUAL DISABILITY	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations