Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	54841
Gene name	Basic, immunoglobulin-like variable motif containing
Gene symbol	BIVM
Synonyms (NCBI Gene)	-
Chromosome	13
Chromosome location	13q33.1

172

Show/Hide all (172)

miRTarBase ID	miRNA	Experiments	Reference
MIRT019544	hsa-miR-340-5p	Sequencing	20371350
MIRT024603	hsa-miR-215-5p	Microarray	19074876
MIRT026350	hsa-miR-192-5p	Microarray	19074876
MIRT043147	hsa-miR-324-5p	CLASH	23622248
MIRT661779	hsa-miR-4797-5p	HITS-CLIP	23824327
MIRT661778	hsa-miR-5007-5p	HITS-CLIP	23824327
MIRT661777	hsa-miR-339-5p	HITS-CLIP	23824327
MIRT661776	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT661775	hsa-miR-924	HITS-CLIP	23824327
MIRT661774	hsa-miR-7976	HITS-CLIP	23824327
MIRT661773	hsa-miR-3173-5p	HITS-CLIP	23824327
MIRT661771	hsa-miR-6799-3p	HITS-CLIP	23824327
MIRT661772	hsa-miR-146b-3p	HITS-CLIP	23824327
MIRT661770	hsa-miR-431-5p	HITS-CLIP	23824327
MIRT661768	hsa-miR-3672	HITS-CLIP	23824327
MIRT661769	hsa-miR-6864-3p	HITS-CLIP	23824327
MIRT661767	hsa-miR-3157-3p	HITS-CLIP	23824327
MIRT661766	hsa-miR-874-3p	HITS-CLIP	23824327
MIRT661765	hsa-miR-8055	HITS-CLIP	23824327
MIRT661764	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT661779	hsa-miR-4797-5p	HITS-CLIP	23824327
MIRT661778	hsa-miR-5007-5p	HITS-CLIP	23824327
MIRT661777	hsa-miR-339-5p	HITS-CLIP	23824327
MIRT661776	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT661775	hsa-miR-924	HITS-CLIP	23824327
MIRT661774	hsa-miR-7976	HITS-CLIP	23824327
MIRT661773	hsa-miR-3173-5p	HITS-CLIP	23824327
MIRT661771	hsa-miR-6799-3p	HITS-CLIP	23824327
MIRT661772	hsa-miR-146b-3p	HITS-CLIP	23824327
MIRT661770	hsa-miR-431-5p	HITS-CLIP	23824327
MIRT661768	hsa-miR-3672	HITS-CLIP	23824327
MIRT661769	hsa-miR-6864-3p	HITS-CLIP	23824327
MIRT661767	hsa-miR-3157-3p	HITS-CLIP	23824327
MIRT661766	hsa-miR-874-3p	HITS-CLIP	23824327
MIRT661765	hsa-miR-8055	HITS-CLIP	23824327
MIRT661764	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT661779	hsa-miR-4797-5p	HITS-CLIP	23824327
MIRT661778	hsa-miR-5007-5p	HITS-CLIP	23824327
MIRT661777	hsa-miR-339-5p	HITS-CLIP	23824327
MIRT661776	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT661775	hsa-miR-924	HITS-CLIP	23824327
MIRT661774	hsa-miR-7976	HITS-CLIP	23824327
MIRT661773	hsa-miR-3173-5p	HITS-CLIP	23824327
MIRT661771	hsa-miR-6799-3p	HITS-CLIP	23824327
MIRT661772	hsa-miR-146b-3p	HITS-CLIP	23824327
MIRT661770	hsa-miR-431-5p	HITS-CLIP	23824327
MIRT661768	hsa-miR-3672	HITS-CLIP	23824327
MIRT661769	hsa-miR-6864-3p	HITS-CLIP	23824327
MIRT661767	hsa-miR-3157-3p	HITS-CLIP	23824327
MIRT661766	hsa-miR-874-3p	HITS-CLIP	23824327
MIRT661765	hsa-miR-8055	HITS-CLIP	23824327
MIRT661764	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT661779	hsa-miR-4797-5p	HITS-CLIP	23824327
MIRT661778	hsa-miR-5007-5p	HITS-CLIP	23824327
MIRT661777	hsa-miR-339-5p	HITS-CLIP	23824327
MIRT661776	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT661775	hsa-miR-924	HITS-CLIP	23824327
MIRT661774	hsa-miR-7976	HITS-CLIP	23824327
MIRT661773	hsa-miR-3173-5p	HITS-CLIP	23824327
MIRT661771	hsa-miR-6799-3p	HITS-CLIP	23824327
MIRT661772	hsa-miR-146b-3p	HITS-CLIP	23824327
MIRT661770	hsa-miR-431-5p	HITS-CLIP	23824327
MIRT661768	hsa-miR-3672	HITS-CLIP	23824327
MIRT661769	hsa-miR-6864-3p	HITS-CLIP	23824327
MIRT661767	hsa-miR-3157-3p	HITS-CLIP	23824327
MIRT661766	hsa-miR-874-3p	HITS-CLIP	23824327
MIRT661765	hsa-miR-8055	HITS-CLIP	23824327
MIRT661764	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT821707	hsa-miR-181a	CLIP-seq
MIRT821708	hsa-miR-181b	CLIP-seq
MIRT821709	hsa-miR-181c	CLIP-seq
MIRT821710	hsa-miR-181d	CLIP-seq
MIRT821711	hsa-miR-2054	CLIP-seq
MIRT821712	hsa-miR-2277-3p	CLIP-seq
MIRT821713	hsa-miR-3065-3p	CLIP-seq
MIRT821714	hsa-miR-3163	CLIP-seq
MIRT821715	hsa-miR-340	CLIP-seq
MIRT821716	hsa-miR-34b	CLIP-seq
MIRT821717	hsa-miR-4262	CLIP-seq
MIRT821718	hsa-miR-4291	CLIP-seq
MIRT821719	hsa-miR-4323	CLIP-seq
MIRT821720	hsa-miR-4427	CLIP-seq
MIRT821721	hsa-miR-4528	CLIP-seq
MIRT821722	hsa-miR-4680-3p	CLIP-seq
MIRT821723	hsa-miR-548c-3p	CLIP-seq
MIRT821724	hsa-miR-638	CLIP-seq
MIRT1942905	hsa-miR-146a	CLIP-seq
MIRT1942906	hsa-miR-146b-5p	CLIP-seq
MIRT821707	hsa-miR-181a	CLIP-seq
MIRT821708	hsa-miR-181b	CLIP-seq
MIRT821709	hsa-miR-181c	CLIP-seq
MIRT821710	hsa-miR-181d	CLIP-seq
MIRT1942907	hsa-miR-1976	CLIP-seq
MIRT821711	hsa-miR-2054	CLIP-seq
MIRT1942908	hsa-miR-2276	CLIP-seq
MIRT821713	hsa-miR-3065-3p	CLIP-seq
MIRT1942909	hsa-miR-3126-3p	CLIP-seq
MIRT821716	hsa-miR-34b	CLIP-seq
MIRT821717	hsa-miR-4262	CLIP-seq
MIRT1942910	hsa-miR-4279	CLIP-seq
MIRT821718	hsa-miR-4291	CLIP-seq
MIRT1942911	hsa-miR-4434	CLIP-seq
MIRT1942912	hsa-miR-4516	CLIP-seq
MIRT1942913	hsa-miR-4531	CLIP-seq
MIRT1942914	hsa-miR-4532	CLIP-seq
MIRT1942915	hsa-miR-4722-3p	CLIP-seq
MIRT1942916	hsa-miR-516b	CLIP-seq
MIRT1942917	hsa-miR-572	CLIP-seq
MIRT1942918	hsa-miR-624	CLIP-seq
MIRT2181642	hsa-miR-1193	CLIP-seq
MIRT2181643	hsa-miR-1910	CLIP-seq
MIRT2181644	hsa-miR-197	CLIP-seq
MIRT1942907	hsa-miR-1976	CLIP-seq
MIRT1942908	hsa-miR-2276	CLIP-seq
MIRT2181645	hsa-miR-2392	CLIP-seq
MIRT2181646	hsa-miR-297	CLIP-seq
MIRT2181647	hsa-miR-3149	CLIP-seq
MIRT2181648	hsa-miR-410	CLIP-seq
MIRT2181649	hsa-miR-411	CLIP-seq
MIRT2181650	hsa-miR-4274	CLIP-seq
MIRT1942910	hsa-miR-4279	CLIP-seq
MIRT2181651	hsa-miR-4307	CLIP-seq
MIRT2181652	hsa-miR-4519	CLIP-seq
MIRT1942914	hsa-miR-4532	CLIP-seq
MIRT2181653	hsa-miR-4662a-5p	CLIP-seq
MIRT2181654	hsa-miR-4676-5p	CLIP-seq
MIRT2181655	hsa-miR-4716-5p	CLIP-seq
MIRT1942915	hsa-miR-4722-3p	CLIP-seq
MIRT2181656	hsa-miR-4735-5p	CLIP-seq
MIRT2181657	hsa-miR-4775	CLIP-seq
MIRT2181658	hsa-miR-483-5p	CLIP-seq
MIRT2181659	hsa-miR-5096	CLIP-seq
MIRT2181660	hsa-miR-516a-5p	CLIP-seq
MIRT2181661	hsa-miR-567	CLIP-seq
MIRT2181662	hsa-miR-575	CLIP-seq
MIRT2181663	hsa-miR-590-3p	CLIP-seq
MIRT2181664	hsa-miR-941	CLIP-seq
MIRT2384789	hsa-miR-4634	CLIP-seq
MIRT2485205	hsa-miR-122	CLIP-seq
MIRT2485206	hsa-miR-3135b	CLIP-seq
MIRT2485207	hsa-miR-3652	CLIP-seq
MIRT2485208	hsa-miR-4430	CLIP-seq
MIRT2384789	hsa-miR-4634	CLIP-seq
MIRT2485205	hsa-miR-122	CLIP-seq
MIRT2675975	hsa-miR-1225-5p	CLIP-seq
MIRT2675976	hsa-miR-18a	CLIP-seq
MIRT2675977	hsa-miR-18b	CLIP-seq
MIRT2675978	hsa-miR-2116	CLIP-seq
MIRT2675979	hsa-miR-27a	CLIP-seq
MIRT2675980	hsa-miR-27b	CLIP-seq
MIRT2675981	hsa-miR-3074-3p	CLIP-seq
MIRT2485206	hsa-miR-3135b	CLIP-seq
MIRT2675982	hsa-miR-3189-3p	CLIP-seq
MIRT2485207	hsa-miR-3652	CLIP-seq
MIRT2675983	hsa-miR-3671	CLIP-seq
MIRT2675984	hsa-miR-4273	CLIP-seq
MIRT2675985	hsa-miR-431	CLIP-seq
MIRT2485208	hsa-miR-4430	CLIP-seq
MIRT2675986	hsa-miR-4433	CLIP-seq
MIRT2675987	hsa-miR-4459	CLIP-seq
MIRT2675988	hsa-miR-4677-5p	CLIP-seq
MIRT2675989	hsa-miR-4683	CLIP-seq
MIRT2675990	hsa-miR-4695-3p	CLIP-seq
MIRT2675991	hsa-miR-4735-3p	CLIP-seq
MIRT2181656	hsa-miR-4735-5p	CLIP-seq
MIRT2675992	hsa-miR-4768-3p	CLIP-seq
MIRT2181657	hsa-miR-4775	CLIP-seq
MIRT2675993	hsa-miR-513a-5p	CLIP-seq
MIRT2675994	hsa-miR-539	CLIP-seq
MIRT2181663	hsa-miR-590-3p	CLIP-seq
MIRT2675995	hsa-miR-874	CLIP-seq
MIRT2181664	hsa-miR-941	CLIP-seq

Show/Hide all (8)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003697	Function	Single-stranded DNA binding	IBA
GO:0004520	Function	DNA endonuclease activity	IBA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005615	Component	Extracellular space	HDA	23580065
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0006259	Process	DNA metabolic process	IEA

MIM	HGNC	e!Ensembl
619006	16034	ENSG00000134897

Q86UB2

Protein name

Basic immunoglobulin-like variable motif-containing protein

Family and domains

Tissue specificity

TISSUE SPECIFICITY: Widely expressed. Expressed at higher level in spleen, ovary, small intestine, colon, peripheral blood leukocytes and liver. Also expressed in testis, ovary, aorta, appendix, trachea, pituitary gland, bladder, uterus, spinal cord, sali

Sequence

MPNVAETERSNDSGNGEHKSERKSPEENLQGAVKSFCTSASGAPLGPKGDGHYPWSCPVT
HTREKIYAICSDYAFLNQATSIYKTPNPSRSPCLPDSTSLSAGNNSSRYIGIPTSTSEII
YNEENSLENLSNSLGKLPLAWEIDKSEFDGVTTNSKHKSGNAKKQVSKRKTSDKKGRYQK
ECPQHSPLEDIKQRKVLDLRRWYCISRPQYKTSCGISSLISCWNFLYSTMGAGNLPPITQ
EEALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFHVKGCSYVLYKPHGKNKTAGET
ASGALSKLTRGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAFSRGPLSPQEVEYWILI
GESSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRL
NWQRFGLWNFPFGTIRQESQPPTHAQGIAKSESEDNISKKQHGRLGRSFSASFHQDSAWK
KMSSIHERRNSGYQGYSDYDGND

Sequence length

503

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (1)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
CHOLELITHIASIS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (3)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Bipolar Disorder	Bipolar Disorder	BEFREE	15635705		★★★★★ ★☆☆☆☆ Found in Text Mining only
Bronchopulmonary Dysplasia	Bronchopulmonary dysplasia	Pubtator	36757497	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Connective Tissue Diseases	Connective tissue disease	Pubtator	22208759	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

BIVM (basic, immunoglobulin-like variable motif containing)