Gene Gene information from NCBI Gene database.
Entrez ID 5261
Gene name Phosphorylase kinase catalytic subunit gamma 2
Gene symbol PHKG2
Synonyms (NCBI Gene)
GSD9C
Chromosome 16
Chromosome location 16p11.2
Summary Phosphorylase kinase is a polymer of 16 subunits, four each of alpha, beta, gamma and delta. The alpha subunit includes the skeletal muscle and hepatic isoforms, encoded by two different genes. The beta subunit is the same in both the muscle and hepatic i
SNPs SNP information provided by dbSNP.
16
SNP ID Visualize variation Clinical significance Consequence
rs137853588 G>A Pathogenic Coding sequence variant, missense variant
rs137853589 T>A Pathogenic Coding sequence variant, missense variant
rs137853590 C>T Pathogenic Coding sequence variant, stop gained
rs137853591 C>T Pathogenic Coding sequence variant, missense variant
rs137853592 T>G Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
434
miRTarBase ID miRNA Experiments Reference
MIRT045827 hsa-miR-138-5p CLASH 23622248
MIRT040308 hsa-miR-615-3p CLASH 23622248
MIRT720509 hsa-miR-939-3p HITS-CLIP 19536157
MIRT720508 hsa-miR-6852-5p HITS-CLIP 19536157
MIRT720507 hsa-miR-6742-3p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
29
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0004672 Function Protein kinase activity IEA
GO:0004674 Function Protein serine/threonine kinase activity IEA
GO:0004674 Function Protein serine/threonine kinase activity TAS 10487978
GO:0004689 Function Phosphorylase kinase activity IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
172471 8931 ENSG00000156873
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P15735
Protein name Phosphorylase b kinase gamma catalytic chain, liver/testis isoform (PHK-gamma-LT) (PHK-gamma-T) (EC 2.7.11.19) (PSK-C3) (Phosphorylase kinase subunit gamma-2)
Protein function Catalytic subunit of the phosphorylase b kinase (PHK), which mediates the neural and hormonal regulation of glycogen breakdown (glycogenolysis) by phosphorylating and thereby activating glycogen phosphorylase. May regulate glycogeneolysis in the
PDB 2Y7J
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00069 Pkinase 24 291 Protein kinase domain Domain
Sequence
Sequence length 406
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Calcium signaling pathway
Insulin signaling pathway
Glucagon signaling pathway
  Glycogen breakdown (glycogenolysis)
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
21
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Glycogen phosphorylase kinase deficiency Likely pathogenic; Pathogenic rs760257918, rs752961445, rs767427889 RCV003155788
RCV004586917
RCV005236770
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Glycogen storage disease IXc Likely pathogenic; Pathogenic rs751600886, rs2151310104, rs778952896, rs1450937339, rs994896967, rs1445993948, rs2151310413, rs2543470606, rs1567261757, rs2543469765, rs2543470691, rs2490967067, rs760257918, rs764699954, rs137853588
View all (28 more)
RCV001378113
RCV001384793
RCV001958829
RCV002037880
RCV002249130
View all (38 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Glycogen storage disease type IXc Pathogenic; Likely pathogenic rs1270523244, rs772912966 RCV001250204
RCV001250205
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
PHKG2-related disorder Likely pathogenic; Pathogenic rs751600886 RCV003405626
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Adrenocortical carcinoma, hereditary Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Clear cell carcinoma of kidney Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Colorectal cancer Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acidosis Lactic Lactic acidosis Pubtator 35549678 Associate
★☆☆☆☆
Found in Text Mining only
Anemia Anemia HPO_DG
★☆☆☆☆
Found in Text Mining only
Autosomal recessive hypophosphatemic vitamin D refractory rickets Hypophosphatemic Vitamin D Refractory Rickets, X-Linked BEFREE 24102521
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 28410206
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 24884718 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Renal Cell Renal cell carcinoma Pubtator 36081434 Associate
★☆☆☆☆
Found in Text Mining only
Cholestasis Cholestasis HPO_DG
★☆☆☆☆
Found in Text Mining only
Cirrhosis Cirrhosis BEFREE 21646031, 24326380, 9384616
★☆☆☆☆
Found in Text Mining only
Cirrhosis Cirrhosis HPO_DG
★☆☆☆☆
Found in Text Mining only
Clumsiness - motor delay Motor delay HPO_DG
★☆☆☆☆
Found in Text Mining only