Gene Gene information from NCBI Gene database.
Entrez ID 51728
Gene name RNA polymerase III subunit K
Gene symbol POLR3K
Synonyms (NCBI Gene)
C11C11-RNP3HLD21My010RPC10RPC11RPC12.5
Chromosome 16
Chromosome location 16p13.3
Summary This gene encodes a small essential subunit of RNA polymerase III, the polymerase responsible for synthesizing transfer and small ribosomal RNAs in eukaryotes. The carboxy-terminal domain of this subunit shares a high degree of sequence similarity to the
miRNA miRNA information provided by mirtarbase database.
258
miRTarBase ID miRNA Experiments Reference
MIRT041912 hsa-miR-484 CLASH 23622248
MIRT664512 hsa-miR-4524b-3p HITS-CLIP 23824327
MIRT664511 hsa-miR-3929 HITS-CLIP 23824327
MIRT664510 hsa-miR-4419b HITS-CLIP 23824327
MIRT664509 hsa-miR-4478 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
20
GO ID Ontology Definition Evidence Reference
GO:0000428 Component DNA-directed RNA polymerase complex IEA
GO:0002376 Process Immune system process IEA
GO:0003676 Function Nucleic acid binding IEA
GO:0003899 Function DNA-directed RNA polymerase activity IEA
GO:0003899 Function DNA-directed RNA polymerase activity TAS 9869639
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606007 14121 ENSG00000161980
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9Y2Y1
Protein name DNA-directed RNA polymerase III subunit RPC10 (RNA polymerase III subunit C10) (DNA-directed RNA polymerase III subunit K) (RNA polymerase III 12.5 kDa subunit) (RPC12.5) (RNA polymerase III subunit C11) (HsC11p) (RPC11) (hRPC11)
Protein function Core component of RNA polymerase III (Pol III) which synthesizes small non-coding RNAs using the four ribonucleoside triphosphates as substrates (PubMed:20413673, PubMed:30584594, PubMed:33335104, PubMed:33558764, PubMed:33558766, PubMed:3367478
PDB 7A6H , 7AE1 , 7AE3 , 7AEA , 7AST , 7D58 , 7D59 , 7DN3 , 7DU2 , 7FJI , 7FJJ , 8ITY , 8IUE , 8IUH , 9FSO , 9FSP , 9FSQ , 9FSR , 9FSS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02150 RNA_POL_M_15KD 2 37 RNA polymerases M/15 Kd subunit Domain
PF01096 TFIIS_C 67 107 Transcription factor S-II (TFIIS) Domain
Sequence
Sequence length 108
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  RNA polymerase
Cytosolic DNA-sensing pathway
  Cytosolic sensors of pathogen-associated DNA
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
3
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Leukodystrophy, hypomyelinating, 21 Pathogenic rs1432006875, rs1288202550 RCV001376157
RCV003329479
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
HYPOMYELINATING LEUKODYSTROPHY 21 Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
STOMACH NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Anemia hypochromic microcytic Hypochromic microcytic anemia Pubtator 32720864 Associate
★☆☆☆☆
Found in Text Mining only
Anodontia Anodontia Pubtator 33005949 Associate
★☆☆☆☆
Found in Text Mining only
Developmental Disabilities Development Disorder BEFREE 31089205
★☆☆☆☆
Found in Text Mining only
Elejalde Disease Hereditary elliptocytosis Pubtator 31089205 Associate
★☆☆☆☆
Found in Text Mining only
Hereditary Diffuse Gastric Cancer Gastric Cancer CTD_human_DG 21364753
★☆☆☆☆
Found in Text Mining only
Hypogonadism Hypogonadism Pubtator 33005949 Associate
★☆☆☆☆
Found in Text Mining only
Leukodystrophy Metachromatic Metachromatic leukodystrophy Pubtator 33005949, 40176224, 40225923 Associate
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of stomach Stomach Neoplasms CTD_human_DG 21364753
★☆☆☆☆
Found in Text Mining only
Stomach Neoplasms Stomach Neoplasms CTD_human_DG 21364753
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Stomach Neoplasms Stomach neoplasms Pubtator 35036435 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations