Gene Gene information from NCBI Gene database.
Entrez ID 51185
Gene name Cereblon
Gene symbol CRBN
Synonyms (NCBI Gene)
MRT2MRT2A
Chromosome 3
Chromosome location 3p26.2
Summary This gene encodes a protein related to the Lon protease protein family. In rodents and other mammals this gene product is found in the cytoplasm localized with a calcium channel membrane protein, and is thought to play a role in brain development. Mutatio
SNPs SNP information provided by dbSNP.
2
SNP ID Visualize variation Clinical significance Consequence
rs78564552 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Intron variant, missense variant, coding sequence variant, 5 prime UTR variant, non coding transcript variant
rs1575094649 G>C Likely-pathogenic Non coding transcript variant, stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
253
miRTarBase ID miRNA Experiments Reference
MIRT049014 hsa-miR-92a-3p CLASH 23622248
MIRT908238 hsa-let-7a CLIP-seq
MIRT908239 hsa-let-7b CLIP-seq
MIRT908240 hsa-let-7c CLIP-seq
MIRT908241 hsa-let-7d CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
24
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 20223979, 24292623, 25416956, 26131937, 26909574, 31515488, 32296183, 32814053, 35271311
GO:0005634 Component Nucleus IBA
GO:0005634 Component Nucleus IDA 20223979
GO:0005634 Component Nucleus IEA
GO:0005737 Component Cytoplasm IDA 20223979
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
609262 30185 ENSG00000113851
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96SW2
Protein name Protein cereblon
Protein function Substrate recognition component of a DCX (DDB1-CUL4-X-box) E3 protein ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as MEIS2, ILF2 or GLUL (PubMed:26990986, PubMed:33009960). Norm
PDB 4M91 , 4TZ4 , 5FQD , 5HXB , 5V3O , 6BN7 , 6BN8 , 6BN9 , 6BNB , 6BOY , 6H0F , 6H0G , 6UML , 6XK9 , 7BQU , 7BQV , 7LPS , 7U8F , 8CVP , 8D7U , 8D7V , 8D7W , 8D7X , 8D7Y , 8D7Z , 8D80 , 8D81 , 8DEY , 8G66 , 8OIZ , 8OJH , 8RQ1 , 8RQ8 , 8RQ9 , 8RQA , 8RQC , 8TNP , 8TNQ , 8TNR , 8TZX , 8U15 , 8U16 , 8U17 , 8UH6 , 9CUO , 9DJT , 9DJX , 9DQD , 9FJX , 9GAO
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02190 LON_substr_bdg 80 317 ATP-dependent protease La (LON) substrate-binding domain Family
PF03226 Yippee-Mis18 319 437 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed. Highly expressed in brain. {ECO:0000269|PubMed:15557513, ECO:0000269|PubMed:17380424}.
Sequence
Sequence length 442
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
29
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Intellectual disability, autosomal recessive 2 Pathogenic; Likely pathogenic rs1302797003, rs1707782133, rs797045036, rs1575094649, rs1226252969 RCV001334906
RCV001779412
RCV000191075
RCV001328947
RCV001264812
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Multiple myeloma Likely pathogenic rs1575079076 RCV000984098
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATTENTION DEFICIT HYPERACTIVITY DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL RECESSIVE NON-SYNDROMIC INTELLECTUAL DISABILITY Disgenet, Orphanet
Disgenet, Orphanet
Disgenet, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Absence of septum pellucidum Absence Of Septum Pellucidum HPO_DG
★☆☆☆☆
Found in Text Mining only
Adult Diffuse Large B-Cell Lymphoma B-cell Lymphoma BEFREE 23252516
★☆☆☆☆
Found in Text Mining only
Anophthalmos with limb anomalies Anophthalmia Pubtator 31964914 Associate
★☆☆☆☆
Found in Text Mining only
Attention Deficit Disorder with Hyperactivity Attention deficit hyperactivity disorder Pubtator 35052433 Associate
★☆☆☆☆
Found in Text Mining only
Attention deficit hyperactivity disorder Attention Deficit Hyperactivity Disorder HPO_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Auditory Perceptual Disorders Auditory perceptual disorder Pubtator 35052433 Associate
★☆☆☆☆
Found in Text Mining only
Autistic behavior Autism HPO_DG
★☆☆☆☆
Found in Text Mining only
Autosomal recessive non-syndromic intellectual disability Non-Syndromic Intellectual Disability Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Bone Diseases Bone Disease BEFREE 29353038
★☆☆☆☆
Found in Text Mining only
Central visual impairment Central Visual Impairment HPO_DG
★☆☆☆☆
Found in Text Mining only