Gene Gene information from NCBI Gene database.
Entrez ID 4744
Gene name Neurofilament heavy chain
Gene symbol NEFH
Synonyms (NCBI Gene)
CMT2CCNFH
Chromosome 22
Chromosome location 22q12.2
Summary Neurofilaments are type IV intermediate filament heteropolymers composed of light, medium, and heavy chains. Neurofilaments comprise the axoskeleton and functionally maintain neuronal caliber. They may also play a role in intracellular transport to axons
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs149955255 C>A,T Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs606231212 CAGAAGCAAAGTCCCCTGAGAAGGCCAAGTCCCCAGTGAAGG>- Not-provided, risk-factor Inframe deletion, coding sequence variant
rs876657411 GA>- Pathogenic Frameshift variant, coding sequence variant
rs876657412 ->AGCC Pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
24
miRTarBase ID miRNA Experiments Reference
MIRT017917 hsa-miR-335-5p Microarray 18185580
MIRT020455 hsa-miR-106b-5p Microarray 17242205
MIRT021571 hsa-miR-142-3p Microarray 17612493
MIRT1179953 hsa-miR-1207-5p CLIP-seq
MIRT1179954 hsa-miR-1909 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
46
GO ID Ontology Definition Evidence Reference
GO:0000226 Process Microtubule cytoskeleton organization IEA
GO:0005200 Function Structural constituent of cytoskeleton IEA
GO:0005200 Function Structural constituent of cytoskeleton IMP 7536898
GO:0005200 Function Structural constituent of cytoskeleton ISS
GO:0005515 Function Protein binding IPI 32814053
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
162230 7737 ENSG00000100285
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P12036
Protein name Neurofilament heavy polypeptide (NF-H) (200 kDa neurofilament protein) (Neurofilament triplet H protein)
Protein function Neurofilaments usually contain three intermediate filament proteins: NEFL, NEFM, and NEFH which are involved in the maintenance of neuronal caliber. NEFH has an important function in mature axons that is not subserved by the two smaller NF prote
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00038 Filament 96 412 Intermediate filament protein Coiled-coil
PF07142 DUF1388 522 547 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 536 561 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 590 610 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 595 624 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 624 651 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 664 692 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 678 706 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 692 720 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 706 734 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 720 748 Repeat of unknown function (DUF1388) Repeat
Sequence
MMSFGGADALLGAPFAPLHGGGSLHYALARKGGAGGTRSAAGSSSGFHSWTRTSVSSVSA
SPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAGYIDKVRQLEA
HNRSLEGEAAALRQQQAGRSAMGELYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAH
VRQRLDDEARQREEAEAAARALARFAQEAEAARVDLQKKAQALQEECGYLRRHHQEEVGE
LLGQIQGSGAAQAQMQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSEEWFRVRLDRL
SEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASY
QEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR
IGFGPIPF
SLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKE
EEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKS
PAEVKSP
EKAKSPAKEEAKSP
PEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKS
PEKAKSPVKE
EAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK
AKSPEKAKS
PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKE
EAKSPEKAKSPVKE
EAKTPEKAKSPVKE
EAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEA
RSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVK
VKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK
EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK
KDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATED
KAAKGK
Sequence length 1026
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Amyotrophic lateral sclerosis
Pathways of neurodegeneration - multiple diseases
 
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
16
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Charcot-Marie-Tooth disease axonal type 2C Likely pathogenic rs1602961831 RCV000991290
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Charcot-Marie-Tooth disease axonal type 2CC Pathogenic; Likely pathogenic rs876657411, rs876657412, rs766193278 RCV000210935
RCV000210933
RCV003321458
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Amyotrophic lateral sclerosis Conflicting classifications of pathogenicity; Uncertain significance ClinVar
CTD, ClinGen, Disgenet, Orphanet
CTD, ClinGen, Disgenet, Orphanet
CTD, ClinGen, Disgenet, Orphanet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
AMYOTROPHIC LATERAL SCLEROSIS 1 CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Amyotrophic lateral sclerosis type 1 Uncertain significance; Conflicting classifications of pathogenicity; Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Amyotrophic lateral sclerosis, susceptibility to risk factor ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Alzheimer Disease Alzheimer disease Pubtator 20624930, 40118053 Associate
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 29746584
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 10515233, 10833316, 10970056, 11090858, 18635547, 25957632, 28185258, 28544463, 28628244, 29054919, 30029677, 7536898, 7566355, 8462101, 8618684
View all (3 more)
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis LHGDN 16084104, 18635547
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Amyotrophic Lateral Sclerosis Amyotrophic lateral sclerosis Pubtator 23755159, 25009280, 25957632, 29959860, 30029677, 37612427, 40607881 Associate
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis ORPHANET_DG 23941283
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis Orphanet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis HPO_DG
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
AMYOTROPHIC LATERAL SCLEROSIS 1 Lateral Sclerosis CTD_human_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Amyotrophic Lateral Sclerosis, Familial Amyotrophic lateral sclerosis BEFREE 8618684
★☆☆☆☆
Found in Text Mining only