Gene Gene information from NCBI Gene database.
Entrez ID 4664
Gene name NGFI-A binding protein 1
Gene symbol NAB1
Synonyms (NCBI Gene)
-
Chromosome 2
Chromosome location 2q32.2
miRNA miRNA information provided by mirtarbase database.
337
miRTarBase ID miRNA Experiments Reference
MIRT018222 hsa-miR-335-5p Microarray 18185580
MIRT023860 hsa-miR-1-3p Microarray 18668037
MIRT024468 hsa-miR-215-5p Microarray 19074876
MIRT026655 hsa-miR-192-5p Microarray 19074876
MIRT051328 hsa-miR-15a-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
16
GO ID Ontology Definition Evidence Reference
GO:0001958 Process Endochondral ossification IEA
GO:0003712 Function Transcription coregulator activity IBA
GO:0003712 Function Transcription coregulator activity IEA
GO:0005634 Component Nucleus IBA
GO:0005634 Component Nucleus IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600800 7626 ENSG00000138386
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q13506
Protein name NGFI-A-binding protein 1 (EGR-1-binding protein 1) (Transcriptional regulatory protein p54)
Protein function Acts as a transcriptional repressor for zinc finger transcription factors EGR1 and EGR2.
PDB 2YUF
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04904 NCD1 5 83 NAB conserved region 1 (NCD1) Domain
PF04905 NCD2 190 318 NAB conserved region 2 (NCD2) Family
PF04902 Nab1 322 486 Conserved region in Nab1 Family
Tissue specificity TISSUE SPECIFICITY: Isoform Short is found in myeloid leukemia cell line KG-1.
Sequence
Sequence length 487
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    NGF-stimulated transcription
EGR2 and SOX10-mediated initiation of Schwann cell myelination
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
18
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ATOPIC ECZEMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOIMMUNE DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
B-CELL ACUTE LYMPHOBLASTIC LEUKEMIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BILIARY LIVER CIRRHOSIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Biliary cirrhosis Biliary cirrhosis GWASCAT_DG 21399635
★☆☆☆☆
Found in Text Mining only
Congenital hypomyelinating neuropathy Congenital Hypomyelinating Neuropathy BEFREE 16136673
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of stomach Stomach Neoplasms BEFREE 30767193
★☆☆☆☆
Found in Text Mining only
Myocardial Infarction Myocardial Infarction BEFREE 29383164
★☆☆☆☆
Found in Text Mining only
Narcolepsy Narcolepsy Pubtator 37188663 Associate
★☆☆☆☆
Found in Text Mining only
Peripheral Nervous System Diseases Nervous System Diseases BEFREE 12030330
★☆☆☆☆
Found in Text Mining only
Primary biliary cirrhosis Biliary Cirrhosis GWASDB_DG 21399635
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Primary biliary cirrhosis Biliary Cirrhosis GWASCAT_DG 21399635, 26394269
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Sjogren's Syndrome Sjogren syndrome Pubtator 35896530 Associate
★☆☆☆☆
Found in Text Mining only
Stomach Carcinoma Stomach Carcinoma BEFREE 30767193
★☆☆☆☆
Found in Text Mining only