Gene Gene information from NCBI Gene database.
Entrez ID 4653
Gene name Myocilin
Gene symbol MYOC
Synonyms (NCBI Gene)
GLC1AGPOAJOAGJOAG1TIGR
Chromosome 1
Chromosome location 1q24.3
Summary MYOC encodes the protein myocilin, which is believed to have a role in cytoskeletal function. MYOC is expressed in many occular tissues, including the trabecular meshwork, and was revealed to be the trabecular meshwork glucocorticoid-inducible response pr
SNPs SNP information provided by dbSNP.
20
SNP ID Visualize variation Clinical significance Consequence
rs28936694 C>A Pathogenic Coding sequence variant, missense variant
rs74315328 A>G Pathogenic Missense variant, coding sequence variant
rs74315329 G>A Pathogenic, likely-pathogenic Stop gained, coding sequence variant
rs74315330 G>A Pathogenic Missense variant, coding sequence variant
rs74315331 A>C,T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
1
miRTarBase ID miRNA Experiments Reference
MIRT005837 hsa-miR-204-5p Microarray 21282569
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
58
GO ID Ontology Definition Evidence Reference
GO:0001649 Process Osteoblast differentiation IBA
GO:0001649 Process Osteoblast differentiation IDA 23629661
GO:0001649 Process Osteoblast differentiation IEA
GO:0001953 Process Negative regulation of cell-matrix adhesion IDA 17984096
GO:0001968 Function Fibronectin binding IPI 11773026
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601652 7610 ENSG00000034971
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q99972
Protein name Myocilin (Myocilin 55 kDa subunit) (Trabecular meshwork-induced glucocorticoid response protein) [Cleaved into: Myocilin, N-terminal fragment (Myocilin 20 kDa N-terminal fragment); Myocilin, C-terminal fragment (Myocilin 35 kDa N-terminal fragment)]
Protein function Secreted glycoprotein regulating the activation of different signaling pathways in adjacent cells to control different processes including cell adhesion, cell-matrix adhesion, cytoskeleton organization and cell migration. Promotes substrate adhe
PDB 4WXQ , 4WXS , 4WXU , 6OU0 , 6OU1 , 6OU2 , 6OU3 , 6PKD , 6PKE , 6PKF , 7SIB , 7SIJ , 7SJT , 7SJU , 7SJV , 7SJW , 7SKD , 7SKE , 7SKF , 7SKG , 7T8D , 8FRR
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02191 OLF 248 501 Olfactomedin-like domain Family
Tissue specificity TISSUE SPECIFICITY: Detected in aqueous humor (PubMed:12697062). Detected in the eye (at protein level) (PubMed:11431441). Widely expressed. Highly expressed in various types of muscle, ciliary body, papillary sphincter, skeletal muscle, heart, and bone m
Sequence
MRFFCARCCSFGPEMPAVQLLLLACLVWDVGARTAQLRKANDQSGRCQYTFSVASPNESS
CPEQSQAMSVIHNLQRDSSTQRLDLEATKARLSSLESLLHQLTLDQAARPQETQEGLQRE
LGTLRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSSQEVARL
RRGQCPQTRDTARAVPPGSREVSTWNLDTLAFQELKSELTEVPASRILKESPSGYLRSGE
GDTGCGELVWVGEPLTLRTAETITGKYGVWMRDPKPTYPYTQETTWRIDTVGTDVRQVFE
YDLISQFMQGYPSKVHILPRPLESTGAVVYSGSLYFQGAESRTVIRYELNTETVKAEKEI
PGAGYHGQFPYSWGGYTDIDLAVDEAGLWVIYSTDEAKGAIVLSKLNPENLELEQTWETN
IRKQSVANAFIICGTLYTVSSYTSADATVNFAYDTGTGISKTLTIPFKNRYKYSSMIDYN
PLEKKLFAWDNLNMVTYDIKL
SKM
Sequence length 504
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
20
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Glaucoma 1, open angle, A Pathogenic; Likely pathogenic rs566289099, rs74315328, rs121909193, rs74315330, rs74315329, rs74315332, rs74315334, rs74315336, rs74315338, rs74315341, rs121909194, rs74315331 RCV003314021
RCV000008409
RCV000008410
RCV000008411
RCV000008412
View all (7 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Glaucoma of childhood Likely pathogenic; Pathogenic rs2102944863, rs566289099, rs2102944655, rs1572210748, rs74315332, rs2102944466, rs2102944606, rs74315328, rs121909193, rs74315334, rs74315336, rs74315338, rs2527838316 RCV001838863
RCV001838869
RCV001843413
RCV003126018
RCV002248290
View all (8 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Open-angle glaucoma Likely pathogenic; Pathogenic rs1447891498, rs2102944632, rs1652918497, rs2102944873, rs2102944665, rs121909194, rs2102944853, rs1652924886, rs2102944566, rs2102944440, rs74315330, rs74315329, rs74315332, rs74315341, rs2527838437
View all (1 more)
RCV006252487
RCV006442442
RCV006252488
RCV005862523
RCV006261768
View all (12 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Primary open angle glaucoma Pathogenic rs74315329 RCV000369379
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CARDIOEMBOLIC STROKE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CONGENITAL GLAUCOMA CTD, Orphanet
CTD, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CONGESTIVE HEART FAILURE Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Constitutional megaloblastic anemia with severe neurologic disease Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
AL-RAQAD SYNDROME AL-Raqad Syndrome BEFREE 23922489
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 25027323
★☆☆☆☆
Found in Text Mining only
Angle Closure Glaucoma Angle Closure Glaucoma BEFREE 25268471
★☆☆☆☆
Found in Text Mining only
Axenfeld-Rieger syndrome Axenfeld anomaly BEFREE 23922489
★☆☆☆☆
Found in Text Mining only
Blindness Blindness Pubtator 17663725, 17984096, 23028669 Associate
★☆☆☆☆
Found in Text Mining only
Combined immunodeficiency Severe combined immunodeficiency disease CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Congenital glaucoma Congenital glaucoma Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Congestive heart failure Congestive Heart Failure BEFREE 31505423
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Corneal Dystrophies Hereditary Corneal dystrophy Pubtator 18427622 Associate
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus Type 1 Diabetes mellitus, type 1 Pubtator 23566828 Associate
★☆☆☆☆
Found in Text Mining only