Gene Gene information from NCBI Gene database.
Entrez ID 4607
Gene name Myosin binding protein C3
Gene symbol MYBPC3
Synonyms (NCBI Gene)
CMD1MMCMH4FHCLVNC10MYBP-CcMyBP-C
Chromosome 11
Chromosome location 11p11.2
Summary MYBPC3 encodes the cardiac isoform of myosin-binding protein C. Myosin-binding protein C is a myosin-associated protein found in the cross-bridge-bearing zone (C region) of A bands in striated muscle. MYBPC3, the cardiac isoform, is expressed exclussively
SNPs SNP information provided by dbSNP.
589
SNP ID Visualize variation Clinical significance Consequence
rs2856655 C>G,T Likely-pathogenic, pathogenic, pathogenic-likely-pathogenic, uncertain-significance Missense variant, coding sequence variant
rs11570045 C>A Likely-pathogenic Stop gained, coding sequence variant
rs11570077 G>C Uncertain-significance, likely-pathogenic Missense variant, coding sequence variant
rs11570112 G>A,C Benign-likely-benign, likely-benign, benign, pathogenic Missense variant, stop gained, coding sequence variant
rs35736435 C>T Benign, likely-benign, benign-likely-benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
6
miRTarBase ID miRNA Experiments Reference
MIRT2277214 hsa-miR-1288 CLIP-seq
MIRT2277215 hsa-miR-3169 CLIP-seq
MIRT2277216 hsa-miR-3664-3p CLIP-seq
MIRT2277217 hsa-miR-4436a CLIP-seq
MIRT2277218 hsa-miR-510 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
31
GO ID Ontology Definition Evidence Reference
GO:0001671 Function ATPase activator activity ISS
GO:0003007 Process Heart morphogenesis IMP 7493025
GO:0003779 Function Actin binding IEA
GO:0005515 Function Protein binding IPI 21569246
GO:0005829 Component Cytosol TAS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600958 7551 ENSG00000134571
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q14896
Protein name Myosin-binding protein C, cardiac-type (Cardiac MyBP-C) (C-protein, cardiac muscle isoform)
Protein function Thick filament-associated protein located in the crossbridge region of vertebrate striated muscle a bands. In vitro it binds MHC, F-actin and native thin filaments, and modifies the activity of actin-activated myosin ATPase. It may modulate musc
PDB 1GXE , 1PD6 , 2AVG , 2K1M , 2MQ0 , 2MQ3 , 2V6H , 3CX2 , 5K6P , 6CXI , 6CXJ , 6G2T , 7LRG , 7TIJ , 7TIT , 7TJ7 , 8G4L
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07679 I-set 10 94 Immunoglobulin I-set domain Domain
PF07679 I-set 156 256 Immunoglobulin I-set domain Domain
PF18362 THB 320 353 Tri-helix bundle domain Domain
PF07679 I-set 363 449 Immunoglobulin I-set domain Domain
PF07679 I-set 454 540 Immunoglobulin I-set domain Domain
PF07679 I-set 545 626 Immunoglobulin I-set domain Domain
PF07679 I-set 653 768 Immunoglobulin I-set domain Domain
PF00041 fn3 773 858 Fibronectin type III domain Domain
PF00041 fn3 871 955 Fibronectin type III domain Domain
PF07679 I-set 975 1062 Immunoglobulin I-set domain Domain
PF00041 fn3 1067 1151 Fibronectin type III domain Domain
PF07679 I-set 1181 1270 Immunoglobulin I-set domain Domain
Sequence
MPEPGKKPVSAFSKKPRSVEVAAGSPAVFEAETERAGVKVRWQRGGSDISASNKYGLATE
GTRHTLTVREVGPADQGSYAVIAGSSKVKFDLKV
IEAEKAEPMLAPAPAPAEATGAPGEA
PAPAAELGESAPSPKGSSSAALNGPTPGAPDDPIGLFVMRPQDGEVTVGGSITFSARVAG
ASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCE
VSTKDKFDCSNFNLTV
HEAMGTGDLDLLSAFRRTSLAGGGRRISDSHEDTGILDFSSLLK
KRDSFRTPRDSKLEAPAEEDVWEILRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEK
KSTAFQKKLEPAYQVSKGHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRT
LTISQCSLADDAAYQCVVGGEKCSTELFV
KEPPVLITRPLEDQLVMVGQRVEFECEVSEE
GAQVKWLKDGVELTREETFKYRFKKDGQRHHLIINEAMLEDAGHYALCTSGGQALAELIV

QEKKLEVYQSIADLMVGAKDQAVFKCEVSDENVRGVWLKNGKELVPDSRIKVSHIGRVHK
LTIDDVTPADEADYSFVPEGFACNLS
AKLHFMEVKIDFVPRQEPPKIHLDCPGRIPDTIV
VVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCE
TEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV
IDVPDAPAAPKI
SNVGEDSCTVQWEPPAYDGGQPILGYILERKKKKSYRWMRLNFDLIQELSHEARRMIEGV
VYEMRVYAVNAIGMSRPS
PASQPFMPIGPPSEPTHLAVEDVSDTTVSLKWRPPERVGAGG
LDGYSVEYCPEGCSEWVAALQGLTEHTSILVKDLPTGARLLFRVRAHNMAGPGAP
VTTTE
PVTVQEILQRPRLQLPRHLRQTIQKKVGEPVNLLIPFQGKPRPQVTWTKEGQPLAGEEVS
IRNSPTDTILFIRAARRVHSGTYQVTVRIENMEDKATLVLQV
VDKPSPPQDLRVTDAWGL
NVALEWKPPQDVGNTELWGYTVQKADKKTMEWFTVLEHYRRTHCVVPELIIGNGYYFRVF
SQNMVGFSDRA
ATTKEPVFIPRPGITYEPPNYKALDFSEAPSFTQPLVNRSVIAGYTAML
CCAVRGSPKPKISWFKNGLDLGEDARFRMFSKQGVLTLEIRKPCPFDGGIYVCRATNLQG
EARCECRLEV
RVPQ
Sequence length 1274
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytoskeleton in muscle cells
Hypertrophic cardiomyopathy
Dilated cardiomyopathy
  Striated Muscle Contraction
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
79
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Arrhythmogenic right ventricular cardiomyopathy Likely pathogenic; Pathogenic rs397515925 RCV003447480
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Asymmetric septal hypertrophy Likely pathogenic; Pathogenic rs397516068 RCV001251034
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cardiomyopathy Pathogenic; Likely pathogenic rs752104988, rs1060499604, rs397515897, rs1252584025, rs2142856598, rs2142856521, rs2142869406, rs2142853009, rs2142851672, rs1219818351, rs2142860924, rs367729718, rs587776699, rs587782958, rs2142857371
View all (180 more)
RCV003236394
RCV004798923
RCV001799422
RCV001799424
RCV001799427
View all (199 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Cardiovascular phenotype Likely pathogenic; Pathogenic rs1252584025, rs730880555, rs2142861729, rs2142867765, rs2142866326, rs2142859074, rs2142852888, rs2142853029, rs2142853009, rs2142860830, rs2142860924, rs2142869736, rs2142849399, rs587776699, rs2142862326
View all (274 more)
RCV004037635
RCV002413923
RCV004037653
RCV005405585
RCV005385119
View all (302 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Abnormality of the cardiovascular system Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Aganglionic megacolon Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Amyloidosis, hereditary systemic 1 Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Alzheimer Disease Alzheimer disease Pubtator 30413934 Associate
★☆☆☆☆
Found in Text Mining only
Arrhythmias Cardiac Cardiac arrhythmias Pubtator 20359594, 33782553, 34400558, 35130036, 36835444, 37107598 Associate
★☆☆☆☆
Found in Text Mining only
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy BEFREE 27000522, 28843747, 31402444
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy Pubtator 28699631, 36136372 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arthrogryposis Arthrogryposis Pubtator 26752647 Associate
★☆☆☆☆
Found in Text Mining only
Asymmetric Septal Hypertrophy Septal Hypertrophy BEFREE 22076249
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Asymmetric Septal Hypertrophy Septal Hypertrophy CLINVAR_DG
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Atrial Fibrillation Atrial Fibrillation BEFREE 24093860, 26869393, 30354366
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Atrial Fibrillation Atrial fibrillation Pubtator 24093860, 30371277, 32841044, 33782553, 37271167 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Atrial Septal Defects Atrial Septal Defect BEFREE 22194935
★☆☆☆☆
Found in Text Mining only