Gene Gene information from NCBI Gene database.
Entrez ID 4513
Gene name Mitochondrially encoded cytochrome c oxidase II
Gene symbol COX2
Synonyms (NCBI Gene)
COIIMTCO2
Chromosome MT
Chromosome location -
miRNA miRNA information provided by mirtarbase database.
49
miRTarBase ID miRNA Experiments Reference
MIRT003964 hsa-miR-143-3p Microarray 17875710
MIRT003965 hsa-miR-101-3p Microarray 17875710
MIRT052383 hsa-let-7a-5p CLASH 23622248
MIRT052290 hsa-let-7b-5p CLASH 23622248
MIRT051845 hsa-let-7c-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
32
GO ID Ontology Definition Evidence Reference
GO:0001666 Process Response to hypoxia IEA
GO:0004129 Function Cytochrome-c oxidase activity IBA
GO:0004129 Function Cytochrome-c oxidase activity IEA
GO:0004129 Function Cytochrome-c oxidase activity IMP 10486321
GO:0004129 Function Cytochrome-c oxidase activity NAS 2550900
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
516040 7421 HGNC
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P00403
Protein name Cytochrome c oxidase subunit 2 (EC 7.1.1.9) (Cytochrome c oxidase polypeptide II)
Protein function Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiqu
PDB 3VRJ , 5Z62
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02790 COX2_TM 1 83 Cytochrome C oxidase subunit II, transmembrane domain Family
PF00116 COX2 95 214 Cytochrome C oxidase subunit II, periplasmic domain Domain
Sequence
Sequence length 227
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Oxidative phosphorylation
Metabolic pathways
Cardiac muscle contraction
Thermogenesis
Non-alcoholic fatty liver disease
Alzheimer disease
Parkinson disease
Amyotrophic lateral sclerosis
Huntington disease
Prion disease
Pathways of neurodegeneration - multiple diseases
Chemical carcinogenesis - reactive oxygen species
Diabetic cardiomyopathy
  TP53 Regulates Metabolic Genes
Respiratory electron transport
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
15
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CEREBELLAR ATAXIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CLEFT PALATE AND BILATERAL CLEFT LIP Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DEPRESSIVE DISORDER Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIABETES MELLITUS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acoustic Neuroma Acoustic Neuroma BEFREE 25616959, 31291992
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly Pubtator 32171274 Stimulate
★☆☆☆☆
Found in Text Mining only
Actinic keratosis Actinic keratosis BEFREE 17488409
★☆☆☆☆
Found in Text Mining only
Acute Coronary Syndrome Coronary Syndrome BEFREE 19485927, 19748095
★☆☆☆☆
Found in Text Mining only
Acute Kidney Tubular Necrosis Renal tubular necrosis BEFREE 12865795
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 28270082
★☆☆☆☆
Found in Text Mining only
Acute pancreatitis Pancreatitis BEFREE 29511434
★☆☆☆☆
Found in Text Mining only
Addison Disease Addison`s Disease HPO_DG
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 10471521, 10630643, 10668484, 10815926, 11005569, 11059772, 11223821, 11448905, 11592775, 11793368, 11920472, 11920515, 12469191, 12713622, 14616542
View all (18 more)
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Of Esophagus Esophageal Cancer BEFREE 11005569, 11059772, 12060038, 14641306, 15585388, 15720819, 15958546, 17477358, 17581270, 21971589, 22258871, 24206575, 30982333
★☆☆☆☆
Found in Text Mining only