Gene Gene information from NCBI Gene database.
Entrez ID 444
Gene name Aspartate beta-hydroxylase
Gene symbol ASPH
Synonyms (NCBI Gene)
AAHBAHCASQ2BP1FDLABHAAHJCTNjunctin
Chromosome 8
Chromosome location 8q12.3
Summary This gene is thought to play an important role in calcium homeostasis. The gene is expressed from two promoters and undergoes extensive alternative splicing. The encoded set of proteins share varying amounts of overlap near their N-termini but have substa
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs80163539 T>- Conflicting-interpretations-of-pathogenicity Coding sequence variant, intron variant, genic downstream transcript variant, frameshift variant
rs374385878 G>A Pathogenic Missense variant, genic downstream transcript variant, coding sequence variant
rs879255574 AGGTT>CCC Pathogenic Genic downstream transcript variant, frameshift variant, coding sequence variant
rs1563580963 C>T Pathogenic Coding sequence variant, stop gained
miRNA miRNA information provided by mirtarbase database.
342
miRTarBase ID miRNA Experiments Reference
MIRT020908 hsa-miR-155-5p Proteomics 18668040
MIRT024363 hsa-miR-215-5p Microarray 19074876
MIRT026731 hsa-miR-192-5p Microarray 19074876
MIRT031802 hsa-miR-16-5p Microarray 21199864
MIRT437918 hsa-miR-1-3p Luciferase reporter assay 23723006
Transcription factors Transcription factors information provided by TRRUST V2 database.
3
Transcription factor Regulation Reference
NOTCH3 Unknown 21504125
USF1 Unknown 19087304
USF2 Unknown 19087304
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
57
GO ID Ontology Definition Evidence Reference
GO:0005198 Function Structural molecule activity TAS 11007777
GO:0005509 Function Calcium ion binding IDA 22586105
GO:0005509 Function Calcium ion binding NAS 11007777
GO:0005509 Function Calcium ion binding TAS 11007777
GO:0005513 Process Detection of calcium ion TAS 22123818
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600582 757 ENSG00000198363
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q12797
Protein name Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16) (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)
Protein function [Isoform 1]: Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins. ; [Isoform 8]: Membrane-bound Ca(2+)-sensing protein, which is a
PDB 5APA , 5JQY , 5JTC , 5JZ6 , 5JZ8 , 5JZA , 5JZU , 6Q9F , 6Q9I , 6QA5 , 6RK9 , 6YYU , 6YYV , 6YYW , 6YYX , 6YYY , 6Z6Q , 6Z6R , 7BMI , 7BMJ , 7E6J , 7YB8 , 7YB9 , 7YBA , 7YBB , 7YBC , 8RE5 , 8RE6 , 8RE7 , 8RE8 , 8RE9
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05279 Asp-B-Hydro_N 43 310 Aspartyl beta-hydroxylase N-terminal region Family
PF13432 TPR_16 345 415 Family
PF05118 Asp_Arg_Hydrox 591 745 Aspartyl/Asparaginyl beta-hydroxylase Domain
Tissue specificity TISSUE SPECIFICITY: Isoform 1 is detected in all tissues tested. Isoform 8 is mainly expressed in pancreas, heart, brain, kidney and liver. Isoform 8 is expressed in kidney (at protein level). {ECO:0000269|PubMed:11007777}.
Sequence
Sequence length 758
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Calcium signaling pathway
Cardiac muscle contraction
  Stimuli-sensing channels
Ion homeostasis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
23
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Exercise-induced malignant hyperthermia Pathogenic rs2151398072 RCV002238742
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome Likely pathogenic; Pathogenic rs1200332180, rs781508063, rs765610535, rs749202132, rs879255574, rs374385878, rs2131116547, rs2547031624, rs2546832937, rs1563580963 RCV001542581
RCV001542582
RCV004546665
RCV001580280
RCV000125463
View all (5 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Malignant hyperthermia of anesthesia Pathogenic rs1236122813 RCV002240149
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Thoracic aortic aneurysm or dissection Likely pathogenic rs374385878 RCV005252763
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASPH-related disorder Likely benign; Uncertain significance; Benign; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRCAX BREAST CANCER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cholangiocarcinoma Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 18604784
★☆☆☆☆
Found in Text Mining only
ANOPHTHALMIA AND PULMONARY HYPOPLASIA Syndromic microphthalmia BEFREE 30768955
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis Pubtator 33526034 Associate
★☆☆☆☆
Found in Text Mining only
Autoimmune Chronic Hepatitis Autoimmune hepatitis BEFREE 10573514
★☆☆☆☆
Found in Text Mining only
Bile duct carcinoma Bile duct carcinoma BEFREE 16673309
★☆☆☆☆
Found in Text Mining only
Bile Duct Neoplasms Bile Duct Neoplasms LHGDN 16673309
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 28301261, 31694640
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 19706770, 28985022, 35726161 Associate
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 33380715 Stimulate
★☆☆☆☆
Found in Text Mining only
Bronchioloalveolar Adenocarcinoma Lung adenocarcinoma BEFREE 17534846
★☆☆☆☆
Found in Text Mining only