Gene Gene information from NCBI Gene database.
Entrez ID 4361
Gene name MRE11 double strand break repair nuclease
Gene symbol MRE11
Synonyms (NCBI Gene)
ATLDHNGS1MRE11AMRE11B
Chromosome 11
Chromosome location 11q21
Summary This gene encodes a nuclear protein involved in homologous recombination, telomere length maintenance, and DNA double-strand break repair. By itself, the protein has 3` to 5` exonuclease activity and endonuclease activity. The protein forms a complex with
SNPs SNP information provided by dbSNP.
91
SNP ID Visualize variation Clinical significance Consequence
rs3218740 G>A Likely-benign, conflicting-interpretations-of-pathogenicity, benign-likely-benign Synonymous variant, coding sequence variant, non coding transcript variant, 5 prime UTR variant
rs61749249 G>A,T Benign, uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, non coding transcript variant
rs116679717 C>G,T Benign, conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance, benign-likely-benign Missense variant, 5 prime UTR variant, non coding transcript variant, coding sequence variant
rs137852759 G>A,C,T Pathogenic Synonymous variant, coding sequence variant, stop gained, missense variant, non coding transcript variant
rs137852760 T>C Uncertain-significance, pathogenic-likely-pathogenic Coding sequence variant, non coding transcript variant, 5 prime UTR variant, missense variant
miRNA miRNA information provided by mirtarbase database.
251
miRTarBase ID miRNA Experiments Reference
MIRT714212 hsa-miR-99a-3p HITS-CLIP 19536157
MIRT714211 hsa-miR-99b-3p HITS-CLIP 19536157
MIRT714210 hsa-miR-6796-3p HITS-CLIP 19536157
MIRT714209 hsa-miR-130b-5p HITS-CLIP 19536157
MIRT714208 hsa-miR-3124-3p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
97
GO ID Ontology Definition Evidence Reference
GO:0000014 Function Single-stranded DNA endodeoxyribonuclease activity IBA
GO:0000014 Function Single-stranded DNA endodeoxyribonuclease activity IDA 9705271
GO:0000014 Function Single-stranded DNA endodeoxyribonuclease activity TAS 9705271
GO:0000019 Process Regulation of mitotic recombination TAS 8530104
GO:0000723 Process Telomere maintenance IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600814 7230 ENSG00000020922
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P49959
Protein name Double-strand break repair protein MRE11 (EC 3.1.-.-) (Meiotic recombination 11 homolog 1) (MRE11 homolog 1) (Meiotic recombination 11 homolog A) (MRE11 homolog A)
Protein function Core component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis (PubMed:11741547, PubMed:14657032, PubMed:22078559, PubMed:23080121, PubMed:24316
PDB 3T1I , 7ZQY , 8BAH , 8K00
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00149 Metallophos 13 249 Calcineurin-like phosphoesterase Domain
PF04152 Mre11_DNA_bind 294 461 Mre11 DNA-binding presumed domain Domain
Sequence
MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD
LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI
PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG
LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL
VIWGHEHEC
KIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP
LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK
PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK
PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEF
VDKEEKDAIEELVKYQLEK
TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF
SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRADTGLE
TSTRSRNSKTAVSASRNMSIIDAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTS
KTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSSLRRNRR
Sequence length 708
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Homologous recombination
Non-homologous end-joining
Cellular senescence
  Cytosolic sensors of pathogen-associated DNA
DNA Damage/Telomere Stress Induced Senescence
IRF3-mediated induction of type I IFN
HDR through Single Strand Annealing (SSA)
HDR through MMEJ (alt-NHEJ)
HDR through Homologous Recombination (HRR)
Sensing of DNA Double Strand Breaks
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Resolution of D-loop Structures through Holliday Junction Intermediates
Nonhomologous End-Joining (NHEJ)
Homologous DNA Pairing and Strand Exchange
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange
Regulation of TP53 Activity through Phosphorylation
G2/M DNA damage checkpoint
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
40
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Acute myeloid leukemia Likely pathogenic; Pathogenic rs951805101 RCV005898498
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Ataxia-telangiectasia-like disorder Likely pathogenic; Pathogenic rs2134989336, rs2134999988, rs1946499901, rs587781381, rs587781384, rs371077728, rs587781822, rs2134831001, rs2134840569, rs2134999194, rs372411821, rs1565233979, rs1195401812, rs745677716, rs774277300
View all (70 more)
RCV001379565
RCV001386975
RCV003771833
RCV002228305
RCV000797374
View all (80 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Ataxia-telangiectasia-like disorder 1 Likely pathogenic; Pathogenic rs2134999988, rs1946499901, rs2135024880, rs2135086294, rs2134969994, rs1185519347, rs587781381, rs587781384, rs371077728, rs587781822, rs587781828, rs2134840569, rs372411821, rs745677716, rs774277300
View all (61 more)
RCV004570964
RCV003470877
RCV001784674
RCV001784675
RCV001784676
View all (74 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Breast carcinoma Likely pathogenic; Pathogenic rs1946499901, rs780001540 RCV001669300
RCV001554327
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ATAXIA TELANGIECTASIA LIKE DISORDER CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Dementia Conflicting classifications of pathogenicity; Uncertain significance ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Depression Conflicting classifications of pathogenicity; Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 28579617
★☆☆☆☆
Found in Text Mining only
Acute Promyelocytic Leukemia Promyelocytic Leukemia BEFREE 25772236
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 29973640
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 16948520
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 16948520
★☆☆☆☆
Found in Text Mining only
ALPHA-THALASSEMIA/MENTAL RETARDATION SYNDROME, NONDELETION TYPE, X-LINKED alpha-Thalassemia Mental Retardation Syndrome, X-Linked BEFREE 23329831
★☆☆☆☆
Found in Text Mining only
Alternating hemiplegia of childhood Alternating hemiplegia of childhood Pubtator 17693401 Associate
★☆☆☆☆
Found in Text Mining only
Anal carcinoma Anal Cancer BEFREE 28641314
★☆☆☆☆
Found in Text Mining only
Anemia Hemolytic Hemolytic anemia Pubtator 15257300 Associate
★☆☆☆☆
Found in Text Mining only
Apraxia oculomotor Cogan type Apraxia Pubtator 21324166 Associate
★☆☆☆☆
Found in Text Mining only