Gene Gene information from NCBI Gene database.
Entrez ID 4358
Gene name Mitochondrial inner membrane protein MPV17
Gene symbol MPV17
Synonyms (NCBI Gene)
CMT2EEMTDPS6SYM1
Chromosome 2
Chromosome location 2p23.3
Summary This gene encodes a mitochondrial inner membrane protein that is implicated in the metabolism of reactive oxygen species. Mutations in this gene have been associated with the hepatocerebral form of mitochondrial DNA depletion syndrome (MDDS). [provided by
SNPs SNP information provided by dbSNP.
42
SNP ID Visualize variation Clinical significance Consequence
rs35759430 G>A,C Likely-benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs113055360 T>C,G Pathogenic Splice acceptor variant
rs121909721 C>T Pathogenic 5 prime UTR variant, coding sequence variant, missense variant
rs121909723 G>A Pathogenic 5 prime UTR variant, coding sequence variant, missense variant
rs121909724 C>T Likely-pathogenic Stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
154
miRTarBase ID miRNA Experiments Reference
MIRT023393 hsa-miR-122-5p Microarray 17612493
MIRT030312 hsa-miR-26b-5p Microarray 19088304
MIRT046366 hsa-miR-23b-3p CLASH 23622248
MIRT045337 hsa-miR-185-5p CLASH 23622248
MIRT1156970 hsa-miR-1207-5p CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
22
GO ID Ontology Definition Evidence Reference
GO:0005737 Component Cytoplasm IBA
GO:0005739 Component Mitochondrion HTP 34800366
GO:0005739 Component Mitochondrion IBA
GO:0005739 Component Mitochondrion IDA 16582910
GO:0005739 Component Mitochondrion IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
137960 7224 ENSG00000115204
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P39210
Protein name Mitochondrial inner membrane protein Mpv17 (Protein Mpv17)
Protein function Non-selective channel that modulates the membrane potential under normal conditions and oxidative stress, and is involved in mitochondrial homeostasis (PubMed:25861990). Involved in mitochondrial deoxynucleoside triphosphates (dNTP) pool homeost
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04117 Mpv17_PMP22 109 170 Mpv17 / PMP22 family Family
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Expressed in pancreas, kidney, muscle, liver, lung, placenta, brain and heart. {ECO:0000269|PubMed:16582910}.
Sequence
MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCG
FVGPVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNW
AKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLS
WKAHRL
Sequence length 176
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Peroxisome   Peroxisomal protein import
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
20
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Charcot-Marie-Tooth disease, axonal, type 2EE Likely pathogenic; Pathogenic rs763400903, rs2148216335, rs774833271, rs1054997754, rs751134093, rs1469699202, rs2465683526, rs770838975, rs2465681506, rs2465685264, rs863224074, rs777604559, rs766160589, rs2465682200, rs1572542511
View all (24 more)
RCV002499772
RCV003469703
RCV001825317
RCV003471215
RCV003471121
View all (37 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Mitochondrial disease Pathogenic rs121909721 RCV004786268
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Mitochondrial DNA depletion syndrome Pathogenic; Likely pathogenic rs121909721, rs121909724, rs375401970, rs267607257, rs267607258, rs267607268, rs140992482 RCV002509162
RCV005406748
RCV003401418
RCV003111578
RCV003478980
View all (2 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Mitochondrial DNA depletion syndrome 15 (hepatocerebral type) Pathogenic; Likely pathogenic rs121909723, rs375401970, rs267607261, rs267607267, rs140992482 RCV003227464
RCV003227483
RCV003227465
RCV003227466
RCV003227501
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
COCHLEAR DISEASES CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DEPLETION OF MITOCHONDRIAL DEOXYRIBONUCLEIC ACID Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
FOCAL GLOMERULOSCLEROSIS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
GOUT GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Alpers Syndrome (disorder) Alpers Syndrome BEFREE 22422207
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 28026881
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 31278193
★☆☆☆☆
Found in Text Mining only
Arthritis, Gouty Gouty arthritis GWASDB_DG 23263486
★☆☆☆☆
Found in Text Mining only
Ataxia Ataxia Pubtator 19012992 Associate
★☆☆☆☆
Found in Text Mining only
Blepharoptosis Ptosis CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Brain Diseases Brain disease Pubtator 30509056 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 35919033 Stimulate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 37152370 Associate
★☆☆☆☆
Found in Text Mining only
Cholestasis Cholestasis GENOMICS_ENGLAND_DG 18695062
★☆☆☆☆
Found in Text Mining only