Gene Gene information from NCBI Gene database.
Entrez ID 3858
Gene name Keratin 10
Gene symbol KRT10
Synonyms (NCBI Gene)
BCIEBIECK10EHKEHK2EHK2AEHK2BIHLK10KPP
Chromosome 17
Chromosome location 17q21.2
Summary This gene encodes a member of the type I (acidic) cytokeratin family, which belongs to the superfamily of intermediate filament (IF) proteins. Keratins are heteropolymeric structural proteins which form the intermediate filament. These filaments, along wi
miRNA miRNA information provided by mirtarbase database.
276
miRTarBase ID miRNA Experiments Reference
MIRT023292 hsa-miR-122-5p Proteomics 21750653
MIRT460670 hsa-miR-497-3p PAR-CLIP 20371350
MIRT077072 hsa-miR-3609 PAR-CLIP 20371350
MIRT077074 hsa-miR-548ah-5p PAR-CLIP 20371350
MIRT077067 hsa-miR-106a-5p PAR-CLIP 20371350
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
HOXA7 Activation 11435435
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
29
GO ID Ontology Definition Evidence Reference
GO:0001533 Component Cornified envelope IDA 7543090
GO:0002009 Process Morphogenesis of an epithelium IBA
GO:0005198 Function Structural molecule activity IEA
GO:0005515 Function Protein binding IPI 19627498, 24940650, 27595935
GO:0005576 Component Extracellular region IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
148080 6413 ENSG00000186395
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P13645
Protein name Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10) (Keratin-10) (K10)
Protein function Plays a role in the establishment of the epidermal barrier on plantar skin (By similarity). Involved in the maintenance of cell layer development and keratin filament bundles in suprabasal cells of the epithelium (By similarity). {ECO:0000250|Un
PDB 3ASW , 4F1Z , 4ZRY , 6E2J , 6EC0 , 6UUI
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00038 Filament 145 459 Intermediate filament protein Coiled-coil
Tissue specificity TISSUE SPECIFICITY: Seen in all suprabasal cell layers including stratum corneum. Expressed on the surface of lung cell lines (PubMed:19627498). Localized on the surface of desquamated nasal epithelial cells (at protein level) (PubMed:12427098). {ECO:0000
Sequence
MSVRYSSSKHYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRG
SSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGIFGGGSFGGGSFGGGSFGGG
GFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLNDRLASYLDKVRALEESNYELEGKIKE
WYEKHGNSHQGEPRDYSKYYKTIDDLKNQILNLTTDNANILLQIDNARLAADDFRLKYEN
EVALRQSVEADINGLRRVLDELTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTG
DVNVEMNAAPGVDLTQLLNNMRSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISS
YKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQ
IRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSS
GGGGRGGGSFGGGYGGGSSGG
GSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGG
GYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPRY
Sequence length 584
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Estrogen signaling pathway
Staphylococcus aureus infection
  Keratinization
Formation of the cornified envelope
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
24
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Annular epidermolytic ichthyosis Likely pathogenic; Pathogenic rs2143150768, rs59075499 RCV002283888
RCV000015681
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Congenital reticular ichthyosiform erythroderma Pathogenic; Likely pathogenic rs2143131560, rs2143133654, rs2143130756, rs2143150768, rs587776815, rs587776816, rs587776817, rs267607384 RCV001619783
RCV001619784
RCV001619785
RCV001730093
RCV003140427
View all (4 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Epidermolytic hyperkeratosis 1 Pathogenic rs58075662, rs61434181 RCV004786265
RCV004593969
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Epidermolytic hyperkeratosis 2A, autosomal dominant Likely pathogenic; Pathogenic rs2143131560, rs60118264, rs57784225, rs58414354, rs58075662, rs58026994, rs58901407 RCV003988887
RCV004593963
RCV004593964
RCV004593965
RCV004562211
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
AUTOSOMAL DOMINANT EPIDERMOLYTIC ICHTHYOSIS Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL RECESSIVE EPIDERMOLYTIC ICHTHYOSIS Disgenet, GWAS catalog, Orphanet
Disgenet, GWAS catalog, Orphanet
Disgenet, GWAS catalog, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA, SQUAMOUS CELL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Annular epidermolytic ichthyosis Ichthyosis with epidermolytic hyperkeratosis Orphanet
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Arsenic Encephalopathy Arsenic Encephalopathy CTD_human_DG 19953893
★☆☆☆☆
Found in Text Mining only
Arthritis Psoriatic Psoriatic arthritis Pubtator 29784039 Associate
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 37146352 Associate
★☆☆☆☆
Found in Text Mining only
Autoimmune Diseases Autoimmune Diseases BEFREE 29569858
★☆☆☆☆
Found in Text Mining only
Autosomal dominant epidermolytic ichthyosis Epidermolytic Ichthyosis Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Autosomal recessive epidermolytic ichthyosis Epidermolytic Ichthyosis Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Basal Cell Nevus Syndrome Basal cell nevus syndrome Pubtator 11558869 Associate
★☆☆☆☆
Found in Text Mining only
Blister Blister Pubtator 26176760, 30859768 Associate
★☆☆☆☆
Found in Text Mining only
Bloom Syndrome Bloom Syndrome BEFREE 12130905
★☆☆☆☆
Found in Text Mining only