Gene Gene information from NCBI Gene database.
Entrez ID 3596
Gene name Interleukin 13
Gene symbol IL13
Synonyms (NCBI Gene)
IL-13P600
Chromosome 5
Chromosome location 5q31.1
Summary This gene encodes an immunoregulatory cytokine produced primarily by activated Th2 cells. This cytokine is involved in several stages of B-cell maturation and differentiation. It up-regulates CD23 and MHC class II expression, and promotes IgE isotype swit
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs20541 A>C,G,T Risk-factor Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
45
miRTarBase ID miRNA Experiments Reference
MIRT006397 hsa-miR-98-5p Luciferase reporter assay 21616524
MIRT006398 hsa-let-7d-5p Luciferase reporter assay 21616524
MIRT006399 hsa-let-7g-5p Luciferase reporter assay 21616524
MIRT006400 hsa-let-7f-5p Luciferase reporter assay 21616524
MIRT006401 hsa-let-7i-5p Luciferase reporter assay 21616524
Transcription factors Transcription factors information provided by TRRUST V2 database.
5
Transcription factor Regulation Reference
AHR Unknown 22981205
CEBPB Unknown 22981205
E2F6 Unknown 22981205
STAT6 Unknown 12776189
TBX21 Repression 18504404;19348920
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
57
GO ID Ontology Definition Evidence Reference
GO:0001774 Process Microglial cell activation IEA
GO:0002639 Process Positive regulation of immunoglobulin production IBA
GO:0002639 Process Positive regulation of immunoglobulin production IEA
GO:0002639 Process Positive regulation of immunoglobulin production IEA
GO:0005125 Function Cytokine activity IDA 8096327
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
147683 5973 ENSG00000169194
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P35225
Protein name Interleukin-13 (IL-13)
Protein function Cytokine that plays important roles in allergic inflammation and immune response to parasite infection (PubMed:8096327, PubMed:8097324). Synergizes with IL2 in regulating interferon-gamma synthesis (PubMed:8096327). Stimulates B-cell proliferati
PDB 1GA3 , 1IJZ , 1IK0 , 3BPO , 3G6D , 3L5W , 3L5X , 3LB6 , 4I77 , 4PS4 , 5E4E , 5L6Y , 8BLQ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03487 IL13 16 144 Interleukin-13 Domain
Sequence
Sequence length 146
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
JAK-STAT signaling pathway
IL-17 signaling pathway
Th1 and Th2 cell differentiation
Fc epsilon RI signaling pathway
Pathways in cancer
Asthma
Inflammatory bowel disease
  Interleukin-4 and Interleukin-13 signaling
Interleukin-18 signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
39
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Allergic rhinitis, susceptibility to Benign; risk factor ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARTHRITIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARTHRITIS, PSORIATIC Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASTHMA CTD, Disgenet, GWAS catalog
CTD, Disgenet, GWAS catalog
CTD, Disgenet, GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute intermittent porphyria Intermittent Porphyria BEFREE 28373582
★☆☆☆☆
Found in Text Mining only
Acute pancreatitis Pancreatitis BEFREE 29517628
★☆☆☆☆
Found in Text Mining only
Adamantinous Craniopharyngioma Adamantinous Craniopharyngioma BEFREE 31249603
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma LHGDN 14634100
★☆☆☆☆
Found in Text Mining only
Adenoma of large intestine Colorectal adenoma BEFREE 16775170
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 11133768, 11585386, 11781246, 15163701, 19417211, 20660789, 20876453, 23299779, 27632954
★☆☆☆☆
Found in Text Mining only
Adult T-Cell Lymphoma/Leukemia T-Cell Lymphoma/Leukemia BEFREE 15163701, 18931077, 19533685
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 28503424
★☆☆☆☆
Found in Text Mining only
Agenesis of corpus callosum Agenesis Of Corpus Callosum BEFREE 22570059
★☆☆☆☆
Found in Text Mining only
Aggressive Periodontitis Aggressive Periodontitis BEFREE 17451413, 20572918, 21198753, 22065246, 29415708
★☆☆☆☆
Found in Text Mining only