Gene Gene information from NCBI Gene database.
Entrez ID 3594
Gene name Interleukin 12 receptor subunit beta 1
Gene symbol IL12RB1
Synonyms (NCBI Gene)
CD212IL-12R-BETA1IL12RBIMD30
Chromosome 19
Chromosome location 19p13.11
Summary The protein encoded by this gene is a type I transmembrane protein that belongs to the hemopoietin receptor superfamily. This protein binds to interleukine 12 (IL12) with a low affinity, and is thought to be a part of IL12 receptor complex. This protein f
SNPs SNP information provided by dbSNP.
16
SNP ID Visualize variation Clinical significance Consequence
rs11575925 G>C Conflicting-interpretations-of-pathogenicity Missense variant, upstream transcript variant, coding sequence variant, genic upstream transcript variant
rs121434492 G>A Pathogenic Coding sequence variant, genic upstream transcript variant, stop gained
rs121434493 G>A Pathogenic Coding sequence variant, genic downstream transcript variant, stop gained
rs121434494 G>A Pathogenic Coding sequence variant, missense variant
rs121434495 A>G Pathogenic 5 prime UTR variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
295
miRTarBase ID miRNA Experiments Reference
MIRT756167 hsa-miR-146a-5p Luciferase reporter assayWestern blottingqRT-PCRImmunohistochemistry (IHC)Flow cytometry 35819446
MIRT1063613 hsa-miR-1225-3p CLIP-seq
MIRT1063614 hsa-miR-1228 CLIP-seq
MIRT1063615 hsa-miR-1233 CLIP-seq
MIRT1063616 hsa-miR-1273f CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
39
GO ID Ontology Definition Evidence Reference
GO:0001916 Process Positive regulation of T cell mediated cytotoxicity ISS
GO:0002230 Process Positive regulation of defense response to virus by host IDA 12421946
GO:0002230 Process Positive regulation of defense response to virus by host ISS
GO:0002827 Process Positive regulation of T-helper 1 type immune response IDA 15114670
GO:0002827 Process Positive regulation of T-helper 1 type immune response ISS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601604 5971 ENSG00000096996
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P42701
Protein name Interleukin-12 receptor subunit beta-1 (IL-12 receptor subunit beta-1) (IL-12R subunit beta-1) (IL-12R-beta-1) (IL-12RB1) (IL-12 receptor beta component) (CD antigen CD212)
Protein function Functions as an interleukin receptor which binds interleukin-12 with low affinity and is involved in IL12 transduction. Associated with IL12RB2 it forms a functional, high affinity receptor for IL12. Also associates with IL23R to form the interl
PDB 6WDP , 6WDQ , 8C7M , 8ODX , 8OE4 , 8XRP , 8YI7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00041 fn3 447 532 Fibronectin type III domain Domain
Sequence
MEPLVTWVVPLLFLFLLSRQGAACRTSECCFQDPPYPDADSGSASGPRDLRCYRISSDRY
ECSWQYEGPTAGVSHFLRCCLSSGRCCYFAAGSATRLQFSDQAGVSVLYTVTLWVESWAR
NQTEKSPEVTLQLYNSVKYEPPLGDIKVSKLAGQLRMEWETPDNQVGAEVQFRHRTPSSP
WKLGDCGPQDDDTESCLCPLEMNVAQEFQLRRRQLGSQGSSWSKWSSPVCVPPENPPQPQ
VRFSVEQLGQDGRRRLTLKEQPTQLELPEGCQGLAPGTEVTYRLQLHMLSCPCKAKATRT
LHLGKMPYLSGAAYNVAVISSNQFGPGLNQTWHIPADTHTEPVALNISVGTNGTTMYWPA
RAQSMTYCIEWQPVGQDGGLATCSLTAPQDPDPAGMATYSWSRESGAMGQEKCYYITIFA
SAHPEKLTLWSTVLSTYHFGGNASAAGTPHHVSVKNHSLDSVSVDWAPSLLSTCPGVLKE
YVVRCRDEDSKQVSEHPVQPTETQVTLSGLRAGVAYTVQVRADTAWLRGVWS
QPQRFSIE
VQVSDWLIFFASLGSFLSILLVGVLGYLGLNRAARHLCPPLPTPCASSAIEFPGGKETWQ
WINPVDFQEEASLQEALVVEMSWDKGERTEPLEKTELPEGAPELALDTELSLEDGDRCKA
KM
Sequence length 662
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
JAK-STAT signaling pathway
Th1 and Th2 cell differentiation
Th17 cell differentiation
Pathways in cancer
Inflammatory bowel disease
  Interleukin-12 signaling
Interleukin-23 signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
19
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
IL12RB1-related disorder Pathogenic rs372833507, rs121434492 RCV004756841
RCV004755723
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Inherited Immunodeficiency Diseases Pathogenic rs147766868 RCV001027584
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Lung cancer Pathogenic rs554063682 RCV005901721
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Mendelian susceptibility to mycobacterial diseases due to complete IL12RB1 deficiency Pathogenic; Likely pathogenic rs781736642, rs576374797, rs2146389344, rs1169002203, rs144702323, rs2146216467, rs754993079, rs2146259279, rs2146310027, rs762747908, rs748173451, rs1470879267, rs991981668, rs2146215644, rs2146200643
View all (34 more)
RCV001388902
RCV001390634
RCV001779409
RCV001782295
RCV001824251
View all (44 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN ISCHEMIA CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Clear cell carcinoma of kidney Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Familial cancer of breast Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Allergic rhinitis (disorder) Allergic rhinitis BEFREE 24997981
★☆☆☆☆
Found in Text Mining only
Anemia Anemia BEFREE 20350312
★☆☆☆☆
Found in Text Mining only
Anemia Hemolytic Hemolytic anemia Pubtator 28266204 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis, Psoriatic Psoriatic Arthritis BEFREE 23673284
★☆☆☆☆
Found in Text Mining only
Arthrogryposis Arthrogryposis Pubtator 21905505, 30255293, 30740107 Associate
★☆☆☆☆
Found in Text Mining only
Asthma Asthma BEFREE 22325360, 29256176
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 22325360, 29256176 Associate
★☆☆☆☆
Found in Text Mining only
Autoimmune Diseases Autoimmune disease Pubtator 28266204 Associate
★☆☆☆☆
Found in Text Mining only
Autoimmune Diseases Autoimmune Diseases BEFREE 28804486
★☆☆☆☆
Found in Text Mining only
Behcet Syndrome Behcet disease Pubtator 12932289, 24859272 Associate
★☆☆☆☆
Found in Text Mining only