Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	348327
Gene name	Zinc finger protein 530
Gene symbol	ZNF530
Synonyms (NCBI Gene)	-
Chromosome	19
Chromosome location	19q13.43

128

Show/Hide all (128)

miRTarBase ID	miRNA	Experiments
MIRT1528416	hsa-miR-1245	CLIP-seq
MIRT1528417	hsa-miR-1245b-5p	CLIP-seq
MIRT1528418	hsa-miR-1262	CLIP-seq
MIRT1528419	hsa-miR-1266	CLIP-seq
MIRT1528420	hsa-miR-1343	CLIP-seq
MIRT1528421	hsa-miR-150	CLIP-seq
MIRT1528422	hsa-miR-181a	CLIP-seq
MIRT1528423	hsa-miR-181b	CLIP-seq
MIRT1528424	hsa-miR-181c	CLIP-seq
MIRT1528425	hsa-miR-181d	CLIP-seq
MIRT1528426	hsa-miR-193a-5p	CLIP-seq
MIRT1528427	hsa-miR-216a	CLIP-seq
MIRT1528428	hsa-miR-216b	CLIP-seq
MIRT1528429	hsa-miR-25	CLIP-seq
MIRT1528430	hsa-miR-27a	CLIP-seq
MIRT1528431	hsa-miR-27b	CLIP-seq
MIRT1528432	hsa-miR-3142	CLIP-seq
MIRT1528433	hsa-miR-3157-5p	CLIP-seq
MIRT1528434	hsa-miR-32	CLIP-seq
MIRT1528435	hsa-miR-363	CLIP-seq
MIRT1528436	hsa-miR-3664-3p	CLIP-seq
MIRT1528437	hsa-miR-3664-5p	CLIP-seq
MIRT1528438	hsa-miR-367	CLIP-seq
MIRT1528439	hsa-miR-3929	CLIP-seq
MIRT1528440	hsa-miR-410	CLIP-seq
MIRT1528441	hsa-miR-4262	CLIP-seq
MIRT1528442	hsa-miR-4325	CLIP-seq
MIRT1528443	hsa-miR-4330	CLIP-seq
MIRT1528444	hsa-miR-4419b	CLIP-seq
MIRT1528445	hsa-miR-4433	CLIP-seq
MIRT1528446	hsa-miR-4459	CLIP-seq
MIRT1528447	hsa-miR-4478	CLIP-seq
MIRT1528448	hsa-miR-4518	CLIP-seq
MIRT1528449	hsa-miR-4530	CLIP-seq
MIRT1528450	hsa-miR-4659a-3p	CLIP-seq
MIRT1528451	hsa-miR-4659b-3p	CLIP-seq
MIRT1528452	hsa-miR-4695-5p	CLIP-seq
MIRT1528453	hsa-miR-4701-3p	CLIP-seq
MIRT1528454	hsa-miR-4713-5p	CLIP-seq
MIRT1528455	hsa-miR-4753-5p	CLIP-seq
MIRT1528456	hsa-miR-4768-3p	CLIP-seq
MIRT1528457	hsa-miR-4772-5p	CLIP-seq
MIRT1528458	hsa-miR-4778-3p	CLIP-seq
MIRT1528459	hsa-miR-508-5p	CLIP-seq
MIRT1528460	hsa-miR-510	CLIP-seq
MIRT1528461	hsa-miR-512-5p	CLIP-seq
MIRT1528462	hsa-miR-513a-5p	CLIP-seq
MIRT1528463	hsa-miR-532-3p	CLIP-seq
MIRT1528464	hsa-miR-550a	CLIP-seq
MIRT1528465	hsa-miR-661	CLIP-seq
MIRT1528466	hsa-miR-766	CLIP-seq
MIRT1528467	hsa-miR-9	CLIP-seq
MIRT1528468	hsa-miR-922	CLIP-seq
MIRT1528469	hsa-miR-92a	CLIP-seq
MIRT1528470	hsa-miR-92b	CLIP-seq
MIRT1528416	hsa-miR-1245	CLIP-seq
MIRT1528422	hsa-miR-181a	CLIP-seq
MIRT1528423	hsa-miR-181b	CLIP-seq
MIRT1528424	hsa-miR-181c	CLIP-seq
MIRT1528425	hsa-miR-181d	CLIP-seq
MIRT2159742	hsa-miR-1915	CLIP-seq
MIRT1528430	hsa-miR-27a	CLIP-seq
MIRT1528431	hsa-miR-27b	CLIP-seq
MIRT2159743	hsa-miR-3160-3p	CLIP-seq
MIRT2159744	hsa-miR-371-5p	CLIP-seq
MIRT2159745	hsa-miR-371b-5p	CLIP-seq
MIRT1528440	hsa-miR-410	CLIP-seq
MIRT1528441	hsa-miR-4262	CLIP-seq
MIRT1528446	hsa-miR-4459	CLIP-seq
MIRT2159746	hsa-miR-4487	CLIP-seq
MIRT1528452	hsa-miR-4695-5p	CLIP-seq
MIRT2159747	hsa-miR-4726-3p	CLIP-seq
MIRT1528462	hsa-miR-513a-5p	CLIP-seq
MIRT2159748	hsa-miR-513c	CLIP-seq
MIRT2159749	hsa-miR-514b-5p	CLIP-seq
MIRT2159750	hsa-miR-558	CLIP-seq
MIRT2159751	hsa-miR-640	CLIP-seq
MIRT2159752	hsa-miR-658	CLIP-seq
MIRT2159753	hsa-miR-665	CLIP-seq
MIRT2159754	hsa-miR-942	CLIP-seq
MIRT1528418	hsa-miR-1262	CLIP-seq
MIRT1528429	hsa-miR-25	CLIP-seq
MIRT1528433	hsa-miR-3157-5p	CLIP-seq
MIRT1528434	hsa-miR-32	CLIP-seq
MIRT2379117	hsa-miR-34a	CLIP-seq
MIRT2379118	hsa-miR-34c-5p	CLIP-seq
MIRT1528435	hsa-miR-363	CLIP-seq
MIRT1528438	hsa-miR-367	CLIP-seq
MIRT1528442	hsa-miR-4325	CLIP-seq
MIRT1528445	hsa-miR-4433	CLIP-seq
MIRT1528446	hsa-miR-4459	CLIP-seq
MIRT2379119	hsa-miR-449a	CLIP-seq
MIRT2379120	hsa-miR-449b	CLIP-seq
MIRT1528453	hsa-miR-4701-3p	CLIP-seq
MIRT2379121	hsa-miR-4738-3p	CLIP-seq
MIRT1528456	hsa-miR-4768-3p	CLIP-seq
MIRT1528459	hsa-miR-508-5p	CLIP-seq
MIRT2379122	hsa-miR-548p	CLIP-seq
MIRT1528465	hsa-miR-661	CLIP-seq
MIRT1528466	hsa-miR-766	CLIP-seq
MIRT1528469	hsa-miR-92a	CLIP-seq
MIRT1528470	hsa-miR-92b	CLIP-seq
MIRT2671246	hsa-miR-1207-5p	CLIP-seq
MIRT2159742	hsa-miR-1915	CLIP-seq
MIRT2671247	hsa-miR-34b	CLIP-seq
MIRT2671248	hsa-miR-3614-5p	CLIP-seq
MIRT2671249	hsa-miR-3688-5p	CLIP-seq
MIRT2671250	hsa-miR-3919	CLIP-seq
MIRT1528439	hsa-miR-3929	CLIP-seq
MIRT1528444	hsa-miR-4419b	CLIP-seq
MIRT1528446	hsa-miR-4459	CLIP-seq
MIRT1528447	hsa-miR-4478	CLIP-seq
MIRT1528452	hsa-miR-4695-5p	CLIP-seq
MIRT2671251	hsa-miR-4722-5p	CLIP-seq
MIRT2159747	hsa-miR-4726-3p	CLIP-seq
MIRT2671252	hsa-miR-4736	CLIP-seq
MIRT2671253	hsa-miR-4756-3p	CLIP-seq
MIRT2671254	hsa-miR-4763-3p	CLIP-seq
MIRT1528456	hsa-miR-4768-3p	CLIP-seq
MIRT2671255	hsa-miR-548c-3p	CLIP-seq
MIRT2159751	hsa-miR-640	CLIP-seq
MIRT2159753	hsa-miR-665	CLIP-seq
MIRT1528467	hsa-miR-9	CLIP-seq
MIRT2159754	hsa-miR-942	CLIP-seq
MIRT2671250	hsa-miR-3919	CLIP-seq
MIRT2671253	hsa-miR-4756-3p	CLIP-seq
MIRT2671255	hsa-miR-548c-3p	CLIP-seq
MIRT2159754	hsa-miR-942	CLIP-seq

Show/Hide all (13)

GO ID	Ontology	Definition	Evidence
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IEA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0001227	Function	DNA-binding transcription repressor activity, RNA polymerase II-specific	IEA
GO:0003677	Function	DNA binding	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0043565	Function	Sequence-specific DNA binding	IEA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q6P9A1

Protein name

Zinc finger protein 530

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01352	KRAB	13 → 54	KRAB box	Family
PF00096	zf-C2H2	239 → 261	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	267 → 289	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	295 → 317	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	323 → 345	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	351 → 373	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	407 → 429	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	435 → 457	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	491 → 513	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	519 → 541	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	547 → 569	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	575 → 597	Zinc finger, C2H2 type	Domain

Sequence

MAAALRAPTQQVFVAFEDVAIYFSQEEWELLDEMQRLLYRDVMLENFAVMASLGCWCGAV
DEGTPSAESVSVEELSQGRTPKADTSTDKSHPCEICTPVLRDILQMIELHASPCGQKLYL
GGASRDFWMSSNLHQLQKLDNGEKLFKVDGDQASFMMNCRFHVSGKPFTFGEVGRDFSAT
SGLLQHQVTPTIERPHSRIRHLRVPTGRKPLKYTESRKSFREKSVFIQHQRADSGERPYK
CSECGKSFSQSSGFLRHRKAHGRTRTHECSECGKSFSRKTHLTQHQRVHTGERPYDCSEC
GKSFRQVSVLIQHQRVHTGERPYECSECGKSFSHSTNLYRHRSAHTSTRPYECSECGKSF
SHSTNLFRHWRVHTGVRPYECSECGKAFSCNIYLIHHQRFHTGERPYVCSECGKSFGQKS
VLIQHQRVHTGERPYECSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKSFSCKTDLIR
HQTVHTGERPYECSVCGKSFIRKTHLIRHQTVHTNERPYECDECGKSYSQSSALLQHRRV
HTGERPYECRECGKSFTRKNHLIQHKTVHTGERPYECSECGKSFSQSSGLLRHRRVHVQ

Sequence length

599

Interactions

View interactions

	Reactome
			Generic Transcription Pathway

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (1)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
SCHIZOPHRENIA	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (1)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Schizophrenia	Schizophrenia	CTD_human_DG	21822266		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

ZNF530 (zinc finger protein 530)