HOXA3 (homeobox A3)

Gene

• Entrez ID: 3200
• Gene name: Homeobox A3
• Gene symbol: HOXA3
• Synonyms (NCBI Gene): HOX1, HOX1E
• Chromosome: 7
• Chromosome location: 7p15.2
• Summary: In vertebrates, the genes encoding the class of transcription factors called homeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic develo

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT003164	hsa-miR-210-3p	immunoprecipitaion, Microarray, qRT-PCR	19826008
MIRT019529	hsa-miR-151a-5p	Sequencing	20371350
MIRT022611	hsa-miR-124-3p	Microarray	18668037
MIRT025796	hsa-miR-7-5p	Sequencing	20371350
MIRT027069	hsa-miR-103a-3p	Sequencing	20371350
MIRT031721	hsa-miR-16-5p	Sequencing	20371350
MIRT047615	hsa-miR-10a-5p	CLASH	23622248
MIRT044187	hsa-miR-99b-5p	CLASH	23622248
MIRT036095	hsa-miR-1296-5p	CLASH	23622248
MIRT475539	hsa-miR-15a-5p	HITS-CLIP	21572407
MIRT475538	hsa-miR-15b-5p	HITS-CLIP	21572407
MIRT475537	hsa-miR-497-5p	HITS-CLIP	21572407
MIRT475536	hsa-miR-195-5p	HITS-CLIP	21572407
MIRT475535	hsa-miR-424-5p	HITS-CLIP	21572407
MIRT031721	hsa-miR-16-5p	HITS-CLIP	21572407
MIRT475534	hsa-miR-6838-5p	HITS-CLIP	21572407
MIRT475533	hsa-miR-4511	HITS-CLIP	21572407
MIRT103494	hsa-miR-8066	HITS-CLIP	21572407
MIRT475531	hsa-miR-6830-5p	HITS-CLIP	21572407
MIRT475532	hsa-miR-4330	HITS-CLIP	21572407
MIRT475530	hsa-miR-4680-5p	HITS-CLIP	21572407
MIRT475529	hsa-miR-3185	HITS-CLIP	21572407
MIRT475528	hsa-miR-4468	HITS-CLIP	21572407
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT475533	hsa-miR-4511	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT557128	hsa-miR-6856-3p	PAR-CLIP	21572407
MIRT557127	hsa-miR-577	PAR-CLIP	21572407
MIRT557126	hsa-miR-6165	PAR-CLIP	21572407
MIRT557125	hsa-miR-3677-5p	PAR-CLIP	21572407
MIRT557124	hsa-miR-3131	PAR-CLIP	21572407
MIRT557123	hsa-miR-611	PAR-CLIP	21572407
MIRT019529	hsa-miR-151a-5p	PAR-CLIP	21572407
MIRT557122	hsa-miR-151b	PAR-CLIP	21572407
MIRT557121	hsa-miR-873-5p	PAR-CLIP	21572407
MIRT557120	hsa-miR-6077	PAR-CLIP	21572407
MIRT557119	hsa-miR-6081	PAR-CLIP	21572407
MIRT557118	hsa-miR-548ag	PAR-CLIP	21572407
MIRT557117	hsa-miR-548ai	PAR-CLIP	21572407
MIRT557116	hsa-miR-548ba	PAR-CLIP	21572407
MIRT557115	hsa-miR-570-5p	PAR-CLIP	21572407
MIRT557114	hsa-miR-6895-5p	PAR-CLIP	21572407
MIRT557113	hsa-miR-3918	PAR-CLIP	21572407
MIRT557112	hsa-miR-3151-3p	PAR-CLIP	21572407
MIRT557111	hsa-miR-6770-5p	PAR-CLIP	21572407
MIRT557110	hsa-miR-6132	PAR-CLIP	21572407
MIRT557109	hsa-miR-6836-5p	PAR-CLIP	21572407
MIRT557108	hsa-miR-1909-3p	PAR-CLIP	21572407
MIRT557107	hsa-miR-6722-3p	PAR-CLIP	21572407
MIRT557106	hsa-miR-4434	PAR-CLIP	21572407
MIRT557104	hsa-miR-4516	PAR-CLIP	21572407
MIRT557105	hsa-miR-5703	PAR-CLIP	21572407
MIRT557103	hsa-miR-4640-5p	PAR-CLIP	21572407
MIRT557102	hsa-miR-4726-5p	PAR-CLIP	21572407
MIRT557101	hsa-miR-3192-3p	PAR-CLIP	21572407
MIRT557100	hsa-miR-4531	PAR-CLIP	21572407
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	21572407
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	21572407
MIRT475537	hsa-miR-497-5p	PAR-CLIP	21572407
MIRT475536	hsa-miR-195-5p	PAR-CLIP	21572407
MIRT475535	hsa-miR-424-5p	PAR-CLIP	21572407
MIRT031721	hsa-miR-16-5p	PAR-CLIP	21572407
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	21572407
MIRT475533	hsa-miR-4511	PAR-CLIP	21572407
MIRT103494	hsa-miR-8066	PAR-CLIP	21572407
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	21572407
MIRT475532	hsa-miR-4330	PAR-CLIP	21572407
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	21572407
MIRT475529	hsa-miR-3185	PAR-CLIP	21572407
MIRT475528	hsa-miR-4468	PAR-CLIP	21572407
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23446348
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23446348
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23446348
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23446348
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23446348
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23446348
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23446348
MIRT475533	hsa-miR-4511	PAR-CLIP	23446348
MIRT103494	hsa-miR-8066	PAR-CLIP	23446348
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23446348
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT475529	hsa-miR-3185	PAR-CLIP	23446348
MIRT475528	hsa-miR-4468	PAR-CLIP	23446348
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23446348
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23446348
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23446348
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23446348
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23446348
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23446348
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23446348
MIRT103494	hsa-miR-8066	PAR-CLIP	23446348
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23446348
MIRT475532	hsa-miR-4330	PAR-CLIP	23446348
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT475529	hsa-miR-3185	PAR-CLIP	23446348
MIRT475528	hsa-miR-4468	PAR-CLIP	23446348
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23446348
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23446348
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23446348
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23446348
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23446348
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23446348
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23446348
MIRT475533	hsa-miR-4511	PAR-CLIP	23446348
MIRT103494	hsa-miR-8066	PAR-CLIP	23446348
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23446348
MIRT475532	hsa-miR-4330	PAR-CLIP	23446348
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT475529	hsa-miR-3185	PAR-CLIP	23446348
MIRT475528	hsa-miR-4468	PAR-CLIP	23446348
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23592263
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23592263
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23592263
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23592263
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23592263
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23592263
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23592263
MIRT475533	hsa-miR-4511	PAR-CLIP	23592263
MIRT103494	hsa-miR-8066	PAR-CLIP	23592263
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23592263
MIRT475532	hsa-miR-4330	PAR-CLIP	23592263
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23592263
MIRT475529	hsa-miR-3185	PAR-CLIP	23592263
MIRT475528	hsa-miR-4468	PAR-CLIP	23592263
MIRT475535	hsa-miR-424-5p	Microarray, qRT-PCR	33611311
MIRT736385	hsa-miR-338-3p	qRT-PCR, Immunocytochemistry (ICC)	33240592
MIRT736385	hsa-miR-338-3p	Luciferase reporter assay, qRT-PCR	31496747
MIRT475539	hsa-miR-15a-5p	HITS-CLIP	21572407
MIRT475538	hsa-miR-15b-5p	HITS-CLIP	21572407
MIRT475537	hsa-miR-497-5p	HITS-CLIP	21572407
MIRT475536	hsa-miR-195-5p	HITS-CLIP	21572407
MIRT475535	hsa-miR-424-5p	HITS-CLIP	21572407
MIRT031721	hsa-miR-16-5p	HITS-CLIP	21572407
MIRT475534	hsa-miR-6838-5p	HITS-CLIP	21572407
MIRT475533	hsa-miR-4511	HITS-CLIP	21572407
MIRT103494	hsa-miR-8066	HITS-CLIP	21572407
MIRT475531	hsa-miR-6830-5p	HITS-CLIP	21572407
MIRT475532	hsa-miR-4330	HITS-CLIP	21572407
MIRT475530	hsa-miR-4680-5p	HITS-CLIP	21572407
MIRT475529	hsa-miR-3185	HITS-CLIP	21572407
MIRT475528	hsa-miR-4468	HITS-CLIP	21572407
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT475533	hsa-miR-4511	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT475537	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT475536	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT475535	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT031721	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT103494	hsa-miR-8066	PAR-CLIP	20371350
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	20371350
MIRT475532	hsa-miR-4330	PAR-CLIP	20371350
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT475529	hsa-miR-3185	PAR-CLIP	20371350
MIRT475528	hsa-miR-4468	PAR-CLIP	20371350
MIRT557128	hsa-miR-6856-3p	PAR-CLIP	21572407
MIRT557127	hsa-miR-577	PAR-CLIP	21572407
MIRT557126	hsa-miR-6165	PAR-CLIP	21572407
MIRT557125	hsa-miR-3677-5p	PAR-CLIP	21572407
MIRT557124	hsa-miR-3131	PAR-CLIP	21572407
MIRT557123	hsa-miR-611	PAR-CLIP	21572407
MIRT019529	hsa-miR-151a-5p	PAR-CLIP	21572407
MIRT557122	hsa-miR-151b	PAR-CLIP	21572407
MIRT557121	hsa-miR-873-5p	PAR-CLIP	21572407
MIRT557120	hsa-miR-6077	PAR-CLIP	21572407
MIRT557119	hsa-miR-6081	PAR-CLIP	21572407
MIRT557118	hsa-miR-548ag	PAR-CLIP	21572407
MIRT557117	hsa-miR-548ai	PAR-CLIP	21572407
MIRT557116	hsa-miR-548ba	PAR-CLIP	21572407
MIRT557115	hsa-miR-570-5p	PAR-CLIP	21572407
MIRT557114	hsa-miR-6895-5p	PAR-CLIP	21572407
MIRT557113	hsa-miR-3918	PAR-CLIP	21572407
MIRT557112	hsa-miR-3151-3p	PAR-CLIP	21572407
MIRT557111	hsa-miR-6770-5p	PAR-CLIP	21572407
MIRT557110	hsa-miR-6132	PAR-CLIP	21572407
MIRT557109	hsa-miR-6836-5p	PAR-CLIP	21572407
MIRT557108	hsa-miR-1909-3p	PAR-CLIP	21572407
MIRT557107	hsa-miR-6722-3p	PAR-CLIP	21572407
MIRT557106	hsa-miR-4434	PAR-CLIP	21572407
MIRT557104	hsa-miR-4516	PAR-CLIP	21572407
MIRT557105	hsa-miR-5703	PAR-CLIP	21572407
MIRT557103	hsa-miR-4640-5p	PAR-CLIP	21572407
MIRT557102	hsa-miR-4726-5p	PAR-CLIP	21572407
MIRT557101	hsa-miR-3192-3p	PAR-CLIP	21572407
MIRT557100	hsa-miR-4531	PAR-CLIP	21572407
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	21572407
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	21572407
MIRT475537	hsa-miR-497-5p	PAR-CLIP	21572407
MIRT475536	hsa-miR-195-5p	PAR-CLIP	21572407
MIRT475535	hsa-miR-424-5p	PAR-CLIP	21572407
MIRT031721	hsa-miR-16-5p	PAR-CLIP	21572407
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	21572407
MIRT475533	hsa-miR-4511	PAR-CLIP	21572407
MIRT103494	hsa-miR-8066	PAR-CLIP	21572407
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	21572407
MIRT475532	hsa-miR-4330	PAR-CLIP	21572407
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	21572407
MIRT475529	hsa-miR-3185	PAR-CLIP	21572407
MIRT475528	hsa-miR-4468	PAR-CLIP	21572407
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23446348
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23446348
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23446348
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23446348
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23446348
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23446348
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23446348
MIRT475533	hsa-miR-4511	PAR-CLIP	23446348
MIRT103494	hsa-miR-8066	PAR-CLIP	23446348
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23446348
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT475529	hsa-miR-3185	PAR-CLIP	23446348
MIRT475528	hsa-miR-4468	PAR-CLIP	23446348
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23446348
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23446348
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23446348
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23446348
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23446348
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23446348
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23446348
MIRT103494	hsa-miR-8066	PAR-CLIP	23446348
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23446348
MIRT475532	hsa-miR-4330	PAR-CLIP	23446348
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT475529	hsa-miR-3185	PAR-CLIP	23446348
MIRT475528	hsa-miR-4468	PAR-CLIP	23446348
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23446348
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23446348
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23446348
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23446348
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23446348
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23446348
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23446348
MIRT475533	hsa-miR-4511	PAR-CLIP	23446348
MIRT103494	hsa-miR-8066	PAR-CLIP	23446348
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23446348
MIRT475532	hsa-miR-4330	PAR-CLIP	23446348
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT475529	hsa-miR-3185	PAR-CLIP	23446348
MIRT475528	hsa-miR-4468	PAR-CLIP	23446348
MIRT475539	hsa-miR-15a-5p	PAR-CLIP	23592263
MIRT475538	hsa-miR-15b-5p	PAR-CLIP	23592263
MIRT475537	hsa-miR-497-5p	PAR-CLIP	23592263
MIRT475536	hsa-miR-195-5p	PAR-CLIP	23592263
MIRT475535	hsa-miR-424-5p	PAR-CLIP	23592263
MIRT031721	hsa-miR-16-5p	PAR-CLIP	23592263
MIRT475534	hsa-miR-6838-5p	PAR-CLIP	23592263
MIRT475533	hsa-miR-4511	PAR-CLIP	23592263
MIRT103494	hsa-miR-8066	PAR-CLIP	23592263
MIRT475531	hsa-miR-6830-5p	PAR-CLIP	23592263
MIRT475532	hsa-miR-4330	PAR-CLIP	23592263
MIRT475530	hsa-miR-4680-5p	PAR-CLIP	23592263
MIRT475529	hsa-miR-3185	PAR-CLIP	23592263
MIRT475528	hsa-miR-4468	PAR-CLIP	23592263
MIRT1053132	hsa-miR-1208	CLIP-seq
MIRT1053133	hsa-miR-1305	CLIP-seq
MIRT1053134	hsa-miR-15a	CLIP-seq
MIRT1053135	hsa-miR-15b	CLIP-seq
MIRT1053136	hsa-miR-16	CLIP-seq
MIRT1053137	hsa-miR-195	CLIP-seq
MIRT1053138	hsa-miR-23a	CLIP-seq
MIRT1053139	hsa-miR-23b	CLIP-seq
MIRT1053140	hsa-miR-23c	CLIP-seq
MIRT1053141	hsa-miR-320a	CLIP-seq
MIRT1053142	hsa-miR-320b	CLIP-seq
MIRT1053143	hsa-miR-320c	CLIP-seq
MIRT1053144	hsa-miR-320d	CLIP-seq
MIRT1053145	hsa-miR-320e	CLIP-seq
MIRT1053146	hsa-miR-34b	CLIP-seq
MIRT1053147	hsa-miR-424	CLIP-seq
MIRT1053148	hsa-miR-4328	CLIP-seq
MIRT1053149	hsa-miR-4429	CLIP-seq
MIRT1053150	hsa-miR-452	CLIP-seq
MIRT1053151	hsa-miR-4676-3p	CLIP-seq
MIRT1053152	hsa-miR-497	CLIP-seq
MIRT1053153	hsa-miR-520d-5p	CLIP-seq
MIRT1053154	hsa-miR-524-5p	CLIP-seq
MIRT1053155	hsa-miR-556-3p	CLIP-seq
MIRT1053156	hsa-miR-570	CLIP-seq
MIRT1053157	hsa-miR-607	CLIP-seq
MIRT2244363	hsa-miR-1973	CLIP-seq
MIRT2547299	hsa-miR-1225-3p	CLIP-seq
MIRT2547300	hsa-miR-1229	CLIP-seq
MIRT2547301	hsa-miR-3163	CLIP-seq
MIRT2547302	hsa-miR-330-3p	CLIP-seq
MIRT2547303	hsa-miR-362-5p	CLIP-seq
MIRT2547304	hsa-miR-4530	CLIP-seq
MIRT2547305	hsa-miR-4793-5p	CLIP-seq
MIRT2547306	hsa-miR-500b	CLIP-seq
MIRT2547307	hsa-miR-502-5p	CLIP-seq
MIRT2547308	hsa-miR-518a-3p	CLIP-seq
MIRT2547309	hsa-miR-518b	CLIP-seq
MIRT2547310	hsa-miR-518c	CLIP-seq
MIRT2547311	hsa-miR-518d-3p	CLIP-seq
MIRT2547312	hsa-miR-518f	CLIP-seq
MIRT2547313	hsa-miR-548ac	CLIP-seq
MIRT2547314	hsa-miR-548ae	CLIP-seq
MIRT2547315	hsa-miR-548aj	CLIP-seq
MIRT2547316	hsa-miR-548am	CLIP-seq
MIRT2547317	hsa-miR-548d-3p	CLIP-seq
MIRT2547318	hsa-miR-548x	CLIP-seq
MIRT2547319	hsa-miR-548z	CLIP-seq
MIRT2547320	hsa-miR-598	CLIP-seq
MIRT1053157	hsa-miR-607	CLIP-seq
MIRT2547321	hsa-miR-614	CLIP-seq
MIRT2547299	hsa-miR-1225-3p	CLIP-seq
MIRT2547301	hsa-miR-3163	CLIP-seq
MIRT2547302	hsa-miR-330-3p	CLIP-seq
MIRT2547303	hsa-miR-362-5p	CLIP-seq
MIRT2547304	hsa-miR-4530	CLIP-seq
MIRT2547305	hsa-miR-4793-5p	CLIP-seq
MIRT2547306	hsa-miR-500b	CLIP-seq
MIRT2547307	hsa-miR-502-5p	CLIP-seq
MIRT2547308	hsa-miR-518a-3p	CLIP-seq
MIRT2547309	hsa-miR-518b	CLIP-seq
MIRT2547310	hsa-miR-518c	CLIP-seq
MIRT2547311	hsa-miR-518d-3p	CLIP-seq
MIRT2547312	hsa-miR-518f	CLIP-seq
MIRT2547313	hsa-miR-548ac	CLIP-seq
MIRT2547314	hsa-miR-548ae	CLIP-seq
MIRT2547315	hsa-miR-548aj	CLIP-seq
MIRT2547316	hsa-miR-548am	CLIP-seq
MIRT2547317	hsa-miR-548d-3p	CLIP-seq
MIRT2547318	hsa-miR-548x	CLIP-seq
MIRT2547319	hsa-miR-548z	CLIP-seq
MIRT2547320	hsa-miR-598	CLIP-seq
MIRT1053157	hsa-miR-607	CLIP-seq
MIRT2547321	hsa-miR-614	CLIP-seq
MIRT2682450	hsa-miR-625	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	ISA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0001525	Process	Angiogenesis	IEP	17972163
GO:0001974	Process	Blood vessel remodeling	IEA
GO:0003677	Function	DNA binding	IEA
GO:0003700	Function	DNA-binding transcription factor activity	IEA
GO:0005515	Function	Protein binding	IPI	21516116, 25416956, 32296183, 32814053
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008283	Process	Cell population proliferation	IEA
GO:0009887	Process	Animal organ morphogenesis	IEA
GO:0009952	Process	Anterior/posterior pattern specification	IBA
GO:0009952	Process	Anterior/posterior pattern specification	IEA
GO:0010159	Process	Specification of animal organ position	IEA
GO:0010467	Process	Gene expression	IEA
GO:0021615	Process	Glossopharyngeal nerve morphogenesis	IEA
GO:0030878	Process	Thyroid gland development	IEA
GO:0048538	Process	Thymus development	IEA
GO:0048645	Process	Animal organ formation	IEA
GO:0048704	Process	Embryonic skeletal system morphogenesis	IBA
GO:0048704	Process	Embryonic skeletal system morphogenesis	IEA
GO:0048706	Process	Embryonic skeletal system development	IEA
GO:0051216	Process	Cartilage development	IEA
GO:0060017	Process	Parathyroid gland development	IEA
GO:0071837	Function	HMG box domain binding	IEA
GO:0072089	Process	Stem cell proliferation	IEA
GO:2000648	Process	Positive regulation of stem cell proliferation	IEA

Other IDs

• MIM: 142954
• HGNC: 5104
• e!Ensembl: ENSG00000105997

Protein

• UniProt ID: O43365
• Protein name: Homeobox protein Hox-A3 (Homeobox protein Hox-1E)
• Protein function: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00046	Homeodomain	192 → 248	Homeodomain	Domain
  PF13293	DUF4074	377 → 441	Domain of unknown function (DUF4074)	Family

• Sequence:

  MQKATYYDSSAIYGGYPYQAANGFAYNANQQPYPASAALGADGEYHRPACSLQSPSSAGG
  HPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPP
  PPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSSSGESCA
  GDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQ
  NRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKP
  PQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHGLQGNGSYGTPHI
  QGSPVFVGGSYVEPMSNSGPALFGLTHLPHAASGAMDYGGAGPLGSGHHHGPGPGEPHPT
  YTDLTGHHPSQGRIQEAPKLTHL

• Sequence length: 443

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
CONGENITAL HEART DEFECTS	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CRANIOFACIAL ABNORMALITIES	—	CTD, Disgenet CTD, Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HEART DEFECTS, CONGENITAL	—	CTD	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HYPERTENSION	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HYPOSPADIAS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, EXPERIMENTAL	—	CTD	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Adenocarcinoma of lung (disorder)	Lung adenocarcinoma	BEFREE	30066858		★☆☆☆☆ Found in Text Mining only
Alzheimer Disease	Alzheimer disease	Pubtator	30045751, 37827850	Associate	★☆☆☆☆ Found in Text Mining only
Brain Neoplasms	Brain neoplasms	Pubtator	36215227	Associate	★☆☆☆☆ Found in Text Mining only
Carcinogenesis	Carcinogenesis	Pubtator	39658479	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma Renal Cell	Renal cell carcinoma	Pubtator	30975094, 32444962	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma Squamous Cell	Squamous cell carcinoma	Pubtator	30066858	Associate	★☆☆☆☆ Found in Text Mining only
Chronic Obstructive Airway Disease	Chronic Obstructive Pulmonary Disease	BEFREE	17203192, 17254481		★☆☆☆☆ Found in Text Mining only
Colon Carcinoma	Colon Carcinoma	BEFREE	29073728, 30066858		★☆☆☆☆ Found in Text Mining only
Colonic Neoplasms	Colonic Neoplasms	BEFREE	29073728		★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	24204606, 30066858	Associate	★☆☆☆☆ Found in Text Mining only
Congenital Heart Defects	Congenital heart defects	CTD_human_DG	1673020		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Conventional (Clear Cell) Renal Cell Carcinoma	Renal Carcinoma	BEFREE	30975094		★☆☆☆☆ Found in Text Mining only
Diabetes	Diabetes	BEFREE	31626638		★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus	Diabetes Mellitus	BEFREE	31626638		★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus	Diabetes mellitus	Pubtator	31626638	Associate	★☆☆☆☆ Found in Text Mining only
Glioblastoma	Glioblastoma	Pubtator	36215227, 39849652	Associate	★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	BEFREE	21947269		★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	Pubtator	21947269, 35349479, 36159801	Associate	★☆☆☆☆ Found in Text Mining only
Hypertensive disease	Hypertension	GWASCAT_DG	27618448, 28498854		★☆☆☆☆ Found in Text Mining only
Hypospadias	Hypospadias	GWASCAT_DG	25108383		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
leukemia	Leukemia	BEFREE	1348930		★☆☆☆☆ Found in Text Mining only
Leukemia Myeloid Acute	Myeloid leukemia	Pubtator	31426381	Stimulate	★☆☆☆☆ Found in Text Mining only
Leukemia, Myelocytic, Acute	Leukemia	BEFREE	31426381		★☆☆☆☆ Found in Text Mining only
Lung Neoplasms	Lung neoplasms	Pubtator	34008478	Associate	★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of breast	Breast Cancer	UNIPROT_DG			★☆☆☆☆ Found in Text Mining only
Malignant tumor of colon	Colonic Neoplasms	BEFREE	29073728, 30066858		★☆☆☆☆ Found in Text Mining only
Meningioma	Meningioma	BEFREE	22735029		★☆☆☆☆ Found in Text Mining only
Nasopharyngeal Carcinoma	Nasopharyngeal carcinoma	Pubtator	28338202	Associate	★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	21947269, 22735029, 29073728, 30975094		★☆☆☆☆ Found in Text Mining only
Non-Small Cell Lung Carcinoma	Lung carcinoma	BEFREE	30066858		★☆☆☆☆ Found in Text Mining only
Osteoarthritis	Osteoarthritis	Pubtator	32283545	Associate	★☆☆☆☆ Found in Text Mining only
Papillary thyroid carcinoma	Papillary thyroid carcinoma	BEFREE	30375256		★☆☆☆☆ Found in Text Mining only
Squamous Cell Carcinoma of Head and Neck	Squamous cell carcinoma	Pubtator	39658479	Associate	★☆☆☆☆ Found in Text Mining only
Werner Syndrome	Werner Syndrome	BEFREE	15561107		★☆☆☆☆ Found in Text Mining only