Gene Gene information from NCBI Gene database.
Entrez ID 3110
Gene name Motor neuron and pancreas homeobox 1
Gene symbol MNX1
Synonyms (NCBI Gene)
HB9HLXB9HOXHB9SCRA1
Chromosome 7
Chromosome location 7q36.3
Summary This gene encodes a nuclear protein, which contains a homeobox domain and is a transcription factor. Mutations in this gene result in Currarino syndrome, an autosomic dominant congenital malformation. Alternatively spliced transcript variants encoding dif
miRNA miRNA information provided by mirtarbase database.
139
miRTarBase ID miRNA Experiments Reference
MIRT027276 hsa-miR-101-3p Sequencing 20371350
MIRT506572 hsa-miR-338-3p PAR-CLIP 20371350
MIRT027276 hsa-miR-101-3p PAR-CLIP 20371350
MIRT506571 hsa-miR-548u PAR-CLIP 20371350
MIRT506570 hsa-miR-7161-5p PAR-CLIP 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
20
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000785 Component Chromatin ISA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IEA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific ISA
GO:0001227 Function DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
142994 4979 ENSG00000130675
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P50219
Protein name Motor neuron and pancreas homeobox protein 1 (Homeobox protein HB9)
Protein function Transcription factor (By similarity). Recognizes and binds to the regulatory elements of target genes, such as visual system homeobox CHX10, negatively modulating transcription (By similarity). Plays a role in establishing motor neuron identity,
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00046 Homeodomain 242 298 Homeodomain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in lymphoid and pancreatic tissues.
Sequence
MEKSKNFRIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSP
ASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPG
AAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHP
ALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGK
CRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSK
KAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDKGSGRRLRDLRDSDPEEDE
DEDDEDHFPYSNGASVHAASSDCSSEDDSPPPRPSHQPAPQ
Sequence length 401
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Maturity onset diabetes of the young  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
11
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormality of the vertebral column Likely pathogenic rs2537771120 RCV005235716
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Currarino triad Likely pathogenic; Pathogenic rs2134838779, rs2134846165, rs2134838783, rs2134846330, rs2537780168, rs121912546, rs2537781329, rs121912547, rs1563700090, rs1563700419, rs121912548, rs121912549, rs1554594329 RCV002245297
RCV002250119
RCV002273111
RCV002273137
RCV000015975
View all (8 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
MNX1-related disorder Likely pathogenic rs2537780127, rs2537773911, rs2537771120 RCV003402535
RCV003397530
RCV003420920
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CURRARINO SYNDROME HPO, Orphanet
HPO, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DESBUQUOIS SYNDROME CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIABETES MELLITUS, PERMANENT NEONATAL Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
GASTROPARESIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute Megakaryocytic Leukemias Megakaryocytic Leukemia BEFREE 18940475
★☆☆☆☆
Found in Text Mining only
Acute Megakaryocytic Leukemias Megakaryocytic Leukemia LHGDN 18940475
★☆☆☆☆
Found in Text Mining only
Acute myelomonocytic leukemia Myelomonocytic Leukemia BEFREE 15540222
★☆☆☆☆
Found in Text Mining only
Adult Acute Myeloblastic Leukemia Myeloblastic Leukemia BEFREE 29569294
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 15772702
★☆☆☆☆
Found in Text Mining only
Altman type IV sacrococcygeal teratoma Sacrococcygeal teratoma BEFREE 22212327
★☆☆☆☆
Found in Text Mining only
Altman type IV sacrococcygeal teratoma Sacrococcygeal teratoma HPO_DG
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 22047141
★☆☆☆☆
Found in Text Mining only
Anal Fistula Anal Fistula HPO_DG
★☆☆☆☆
Found in Text Mining only
Anus, Imperforate Imperforate anus HPO_DG
★☆☆☆☆
Found in Text Mining only