Gene Gene information from NCBI Gene database.
Entrez ID 286
Gene name Ankyrin 1
Gene symbol ANK1
Synonyms (NCBI Gene)
ANKSPH1SPH2ankyrin-1
Chromosome 8
Chromosome location 8p11.21
Summary Ankyrins are a family of proteins that link the integral membrane proteins to the underlying spectrin-actin cytoskeleton and play key roles in activities such as cell motility, activation, proliferation, contact and the maintenance of specialized membrane
SNPs SNP information provided by dbSNP.
20
SNP ID Visualize variation Clinical significance Consequence
rs137852829 C>A,T Pathogenic Genic upstream transcript variant, stop gained, coding sequence variant, missense variant, intron variant
rs137852830 C>T Pathogenic Genic upstream transcript variant, stop gained, coding sequence variant
rs397514029 ->G Pathogenic Coding sequence variant, frameshift variant, genic upstream transcript variant
rs750820522 G>A Pathogenic Coding sequence variant, stop gained, genic upstream transcript variant
rs777701149 G>A Pathogenic Stop gained, genic upstream transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
217
miRTarBase ID miRNA Experiments Reference
MIRT724155 hsa-miR-3617-5p HITS-CLIP 19536157
MIRT724154 hsa-miR-641 HITS-CLIP 19536157
MIRT724153 hsa-miR-376c-3p HITS-CLIP 19536157
MIRT724152 hsa-miR-877-3p HITS-CLIP 19536157
MIRT724151 hsa-miR-942-5p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
47
GO ID Ontology Definition Evidence Reference
GO:0005198 Function Structural molecule activity NAS 9430667
GO:0005200 Function Structural constituent of cytoskeleton IEA
GO:0005200 Function Structural constituent of cytoskeleton TAS 8640229
GO:0005515 Function Protein binding IPI 379653, 12527750, 12719424, 16580865, 16962094, 32296183
GO:0005737 Component Cytoplasm IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612641 492 ENSG00000029534
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P16157
Protein name Ankyrin-1 (ANK-1) (Ankyrin-R) (Erythrocyte ankyrin)
Protein function Component of the ankyrin-1 complex, a multiprotein complex involved in the stability and shape of the erythrocyte membrane (PubMed:35835865). Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein
PDB 1N11 , 2YQF , 2YVI , 3F59 , 3KBT , 3KBU , 3UD1 , 3UD2 , 7TW3 , 7TW5 , 7TW6 , 7UZQ , 7UZU , 7V0K , 7V0M , 7V0S , 7V0X , 8CS9 , 8CSL , 8CSV , 8CTE
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00023 Ank 77 109 Ankyrin repeat Repeat
PF00023 Ank 110 142 Ankyrin repeat Repeat
PF00023 Ank 205 235 Ankyrin repeat Repeat
PF00023 Ank 238 270 Ankyrin repeat Repeat
PF00023 Ank 271 303 Ankyrin repeat Repeat
PF00023 Ank 304 335 Ankyrin repeat Repeat
PF00023 Ank 337 368 Ankyrin repeat Repeat
PF00023 Ank 370 402 Ankyrin repeat Repeat
PF00023 Ank 403 435 Ankyrin repeat Repeat
PF00023 Ank 438 468 Ankyrin repeat Repeat
PF00023 Ank 469 501 Ankyrin repeat Repeat
PF00023 Ank 502 533 Ankyrin repeat Repeat
PF00023 Ank 535 567 Ankyrin repeat Repeat
PF00023 Ank 568 598 Ankyrin repeat Repeat
PF00023 Ank 601 633 Ankyrin repeat Repeat
PF00023 Ank 634 666 Ankyrin repeat Repeat
PF00023 Ank 700 732 Ankyrin repeat Repeat
PF00023 Ank 733 765 Ankyrin repeat Repeat
PF00791 ZU5 914 1012 ZU5 domain Family
PF17809 UPA_2 1236 1365 UPA domain Domain
PF00531 Death 1404 1486 Death domain Domain
Tissue specificity TISSUE SPECIFICITY: Isoform Mu17, isoform Mu18, isoform Mu19 and isoform Mu20 are expressed in skeletal muscle. Isoform Br21 is expressed in brain. {ECO:0000269|PubMed:9430667}.
Sequence
MPYSVGFREADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKM
VVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQ
ENHLEVVKFLLENGANQNVATE
DGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIA
ARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGI
TPLHIASRRGNVIMVRLLLDRGAQIETKTK
DELTPLHCAARNGHVRISEILLDHGAPIQA
KTK
NGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDK
GAKPNSRA
LNGFTPLHIACKKNHVRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIV
KNLLQRGASPNVSNV
KVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI
GHTNMVKLLLENNANPNLATT
AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPL
HVAAKYGKVRVAELLLERDAHPNAAGK
NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAW
NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN
GNLGNK
SGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL
LQHQADVNAKTK
LGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI
SVTDVLKVVTDETSFVLVSDKHRMSFPETVDEILDVSEDEGEELISFKAERRDSRDVDEE
KELLDFVPKLDQVVESPAIPRIPCAMPETVVIRSEEQEQASKEYDEDSLIPSSPATETSD
NISPVASPVHTGFLVSFMVDARGGSMRGSRHNGLRVVIPPRTCAAPTRITCRLVKPQKLS
TPPPLAEEEGLASRIIALGPTGAQFLSPVIVEIPHFASHGRGDRELVVLRSE
NGSVWKEH
RSRYGESYLDQILNGMDEELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYDTIGPEG
GSLKSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRK
FHRPIGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSVIGGTDQAQWEDITGTTKLVYANEC
ANFTTNVSARFWLSDCPRTAEAVNFATLLYKELTAVPYMAKFVIFAKMNDPREGRLRCYC
MTDDKVDKTLEQHENFVEVARSRDIEVLEGMSLFAELSGNLVPVKKAAQQRSFHFQSFRE
NRLAMPVKVRDSSREPGGSLSFLRKAMKYEDTQHILCHLNITMPP
CAKGSGAEDRRRTPT
PLALRYSILSESTPGSLSGTEQAEMKMAVISEHLGLSWAELARELQFSVEDINRIRVENP
NSLLEQSVALLNLWVIREGQNANMENLYTALQSIDRGEIVNMLEGS
GRQSRNLKPDRRHT
DRDYSLSPSQMNGYSSLQDELLSPASLGCALSSPLRADQYWNEVAVLDAIPLAATEHDTM
LEMSDMQVWSAGLTPSLVTAEDSSLECSKAEDSDATGHEWKLEGALSEEPRGPELGSLEL
VEDDTVDSDATNGLIDLLEQEEGQRSEEKLPGSKRQDDATGAGQDSENEVSLVSGHQRGQ
ARITHSPTVSQVTERSQDRLQDWDADGSIVSYLQDAAQGSWQEEVTQGPHSFQGTSTMTE
GLEPGGSQEYEKVLVSVSEHTWTEQPEAESSQADRDRRQQGQEEQVQEAKNTFTQVVQGN
EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVTVEGPLEDPSE
LEVDIDYFMKHSKDHTSTPNP
Sequence length 1881
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Proteoglycans in cancer   Interaction between L1 and Ankyrins
Neurofascin interactions
COPI-mediated anterograde transport
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
39
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
ANK1-related disorder Pathogenic; Likely pathogenic rs2150593517, rs137852831, rs397514029, rs2486915489, rs2487635534, rs35681783, rs2486900052, rs2486721298, rs2486748129, rs2486817571, rs2486967209, rs2486987573, rs2486768968, rs141844800, rs1818974494 RCV003416450
RCV003398399
RCV003415605
RCV003916392
RCV003395707
View all (10 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Hereditary spherocytosis Likely pathogenic rs771419825 RCV003234637
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hereditary spherocytosis type 1 Likely pathogenic; Pathogenic rs2150563125, rs1172677213, rs2150596703, rs2150635565, rs2150661824, rs2150589601, rs2150589472, rs1187228917, rs2150616506, rs2150612966, rs2150605957, rs2150594434, rs2150593284, rs2150590331, rs2150612992
View all (171 more)
RCV003136091
RCV001564049
RCV003132510
RCV005635166
RCV001728102
View all (187 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
SPHEROCYTOSIS, TYPE 1, AUTOSOMAL RECESSIVE Likely pathogenic; Pathogenic rs786205243, rs786205244 RCV000000542
RCV000000543
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Anemia Uncertain significance ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
ANEMIA, HEMOLYTIC Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BONE DISEASES, DEVELOPMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
8p11.2 deletion syndrome 8p11.2 deletion syndrome ORPHANET_DG 22771917
★☆☆☆☆
Found in Text Mining only
8p11.2 deletion syndrome 8p11.2 deletion syndrome Orphanet
★☆☆☆☆
Found in Text Mining only
Accessory rib Accessory Rib HPO_DG
★☆☆☆☆
Found in Text Mining only
Acute Cerebrovascular Accidents Stroke BEFREE 31804702
★☆☆☆☆
Found in Text Mining only
Acute Megakaryocytic Leukemias Megakaryocytic Leukemia BEFREE 25533034
★☆☆☆☆
Found in Text Mining only
Adult T-Cell Lymphoma/Leukemia T-Cell Lymphoma/Leukemia BEFREE 14991527
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 25129075, 25129077, 28700589, 30045751, 30898171, 32233750 Associate
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease, Late Onset Alzheimer disease BEFREE 26611832
★☆☆☆☆
Found in Text Mining only
Anemia Anemia BEFREE 26830532
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Anemia Anemia CLINVAR_DG
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)