Gene Gene information from NCBI Gene database.
Entrez ID 27063
Gene name Ankyrin repeat domain 1
Gene symbol ANKRD1
Synonyms (NCBI Gene)
ALRPC-193CARPCVARPMCARPbA320F15.2
Chromosome 10
Chromosome location 10q23.31
Summary The protein encoded by this gene is localized to the nucleus of endothelial cells and is induced by IL-1 and TNF-alpha stimulation. Studies in rat cardiomyocytes suggest that this gene functions as a transcription factor. Interactions between this protein
SNPs SNP information provided by dbSNP.
8
SNP ID Visualize variation Clinical significance Consequence
rs35550482 G>A Conflicting-interpretations-of-pathogenicity, benign-likely-benign, benign, likely-benign Missense variant, coding sequence variant
rs150266349 T>A,C Uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs150797476 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Coding sequence variant, missense variant
rs183061595 A>G Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs201398260 G>T Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
58
miRTarBase ID miRNA Experiments Reference
MIRT019931 hsa-miR-375 Microarray 20215506
MIRT025157 hsa-miR-181a-5p Microarray 17612493
MIRT1545360 hsa-miR-127-5p CLIP-seq
MIRT1545361 hsa-miR-1293 CLIP-seq
MIRT1545362 hsa-miR-300 CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
DDIT3 Repression 19299913
TP53 Unknown 20599664
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
49
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0001650 Component Fibrillar center IDA
GO:0002039 Function P53 binding IPI 20599664
GO:0003677 Function DNA binding IDA 7730328
GO:0003712 Function Transcription coregulator activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
609599 15819 ENSG00000148677
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q15327
Protein name Ankyrin repeat domain-containing protein 1 (Cardiac ankyrin repeat protein) (Cytokine-inducible gene C-193 protein) (Cytokine-inducible nuclear protein)
Protein function May play an important role in endothelial cell activation. May act as a nuclear transcription factor that negatively regulates the expression of cardiac genes. Induction seems to be correlated with apoptotic cell death in hepatoma cells. {ECO:00
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF12796 Ank_2 124 216 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 181 249 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 218 282 Ankyrin repeats (3 copies) Repeat
Tissue specificity TISSUE SPECIFICITY: Mainly expressed in activated vascular endothelial cells. To a lower extent, also expressed in hepatoma cells. {ECO:0000269|PubMed:15805281, ECO:0000269|PubMed:7730328}.
Sequence
MMVLKVEELVTGKKNGNGEAGEFLPEDFRDGEYEAAVTLEKQEDLKTLLAHPVTLGEQQW
KSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVD
VPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIE
FRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIA
CEADLNAKD
REGDTPLHDAVRLNRYKMIRLLIMYGADLNIKN
CAGKTPMDLVLHWQNGTK
AIFDSLRENSYKTSRIATF
Sequence length 319
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytoskeleton in muscle cells   PPARA activates gene expression
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
39
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANKRD1-related dilated cardiomyopathy Uncertain significance; Likely benign; Conflicting classifications of pathogenicity; Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANKRD1-related disorder Benign; Likely benign; Uncertain significance; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Brugada syndrome Uncertain significance ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
CARDIOMYOPATHIES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 18980987
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis LHGDN 12679596
★☆☆☆☆
Found in Text Mining only
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy BEFREE 19359327
★☆☆☆☆
Found in Text Mining only
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy Pubtator 19359327 Associate
★☆☆☆☆
Found in Text Mining only
Astrocytoma Astrocytoma BEFREE 29792187
★☆☆☆☆
Found in Text Mining only
Atrial Septal Defect Sinus Venosus Sinus venosus atrial septal defect BEFREE 31688894
★☆☆☆☆
Found in Text Mining only
Biliary Atresia Biliary atresia Pubtator 34918678 Associate
★☆☆☆☆
Found in Text Mining only
Bipolar Disorder Bipolar disorder Pubtator 33168801 Associate
★☆☆☆☆
Found in Text Mining only
Bone Diseases Metabolic Bone disease Pubtator 35575247 Associate
★☆☆☆☆
Found in Text Mining only
Breast adenocarcinoma Breast Adenocarcinoma BEFREE 12377985
★☆☆☆☆
Found in Text Mining only