Gene Gene information from NCBI Gene database.
Entrez ID 2688
Gene name Growth hormone 1
Gene symbol GH1
Synonyms (NCBI Gene)
GHGH-NGHB5GHNIGHD1AIGHD1BIGHD2hGH-N
Chromosome 17
Chromosome location 17q23.3
Summary The protein encoded by this gene is a member of the somatotropin/prolactin family of hormones which play an important role in growth control. The gene, along with four other related genes, is located at the growth hormone locus on chromosome 17 where they
SNPs SNP information provided by dbSNP.
3
SNP ID Visualize variation Clinical significance Consequence
rs111957225 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, synonymous variant
rs137853219 C>T Pathogenic Coding sequence variant, stop gained
rs140576665 G>A,C,T Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, synonymous variant, missense variant
miRNA miRNA information provided by mirtarbase database.
10
miRTarBase ID miRNA Experiments Reference
MIRT1018380 hsa-miR-3150a-3p CLIP-seq
MIRT1018381 hsa-miR-3175 CLIP-seq
MIRT1018382 hsa-miR-4640-5p CLIP-seq
MIRT1018383 hsa-miR-4667-5p CLIP-seq
MIRT1018384 hsa-miR-4700-5p CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
3
Transcription factor Regulation Reference
HNF4A Repression 17991764
POU1F1 Activation 16061841;7529501
POU1F1 Unknown 11081207;11874696;15998782;17456792;7608249;7877625;9207961
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
50
GO ID Ontology Definition Evidence Reference
GO:0002092 Process Positive regulation of receptor internalization IDA 9360546
GO:0005125 Function Cytokine activity IDA 7782332
GO:0005131 Function Growth hormone receptor binding IBA
GO:0005131 Function Growth hormone receptor binding IDA 6303755, 8063815
GO:0005131 Function Growth hormone receptor binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
139250 4261 ENSG00000259384
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P01241
Protein name Somatotropin (Growth hormone) (GH) (GH-N) (Growth hormone 1) (Pituitary growth hormone)
Protein function Plays an important role in growth control. Its major role in stimulating body growth is to stimulate the liver and other tissues to secrete IGF1. It stimulates both the differentiation and proliferation of myoblasts. It also stimulates amino aci
PDB 1A22 , 1AXI , 1BP3 , 1HGU , 1HUW , 1HWG , 1HWH , 1KF9 , 3HHR , 6QIO
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00103 Hormone_1 9 215 Somatotropin hormone family Domain
Sequence
Sequence length 217
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
Neuroactive ligand-receptor interaction
Hormone signaling
PI3K-Akt signaling pathway
JAK-STAT signaling pathway
Growth hormone synthesis, secretion and action
  Prolactin receptor signaling
Synthesis, secretion, and deacylation of Ghrelin
Growth hormone receptor signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
37
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Ateleiotic dwarfism Likely pathogenic; Pathogenic rs1907478805, rs1907472729, rs137853219, rs2509253023, rs71640277 RCV005860212
RCV000017332
RCV000017333
RCV000017335
RCV002504799
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Autosomal dominant isolated somatotropin deficiency Likely pathogenic; Pathogenic rs1567803095, rs2509250234, rs797044450, rs71640277, rs863223306, rs2144738731, rs863223307, rs2144739370, rs863223309, rs863223310, rs2509250570, rs137853223, rs2144739380, rs2144739391, rs754126557 RCV002279179
RCV003455852
RCV000017338
RCV000017340
RCV000017341
View all (11 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
GH1-related disorder Likely pathogenic; Pathogenic rs2144739391 RCV003894809
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Idiopathic growth hormone deficiency Pathogenic; Likely pathogenic rs863223307, rs2509251319 RCV004700243
RCV003988556
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANEMIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANEMIA, DIAMOND-BLACKFAN Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BETA THALASSEMIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BONNEVIE-ULLRICH SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Aarskog syndrome Aarskog Syndrome BEFREE 14594174
★☆☆☆☆
Found in Text Mining only
Achondroplasia Achondroplasia BEFREE 10102070, 10509364, 10971105, 14671399, 15780958, 28808977, 30706088, 8374657, 9539301
★☆☆☆☆
Found in Text Mining only
Achondroplasia Achondroplasia Pubtator 12733711, 16618986, 27147792 Associate
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly BEFREE 10701527, 11298082, 12744370, 15473133, 16262568, 16572267, 16832583, 17573420, 17671221, 17916996, 18349058, 20234189, 20956999, 21519236, 21550080
View all (90 more)
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly Pubtator 11404775, 26863932, 27503591, 28002537, 29266696, 30742299, 30843342, 31771524, 33019423, 34027406, 34282806 Stimulate
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly Pubtator 15761655, 16126556, 17242703, 18840925, 19293545, 19637311, 2118540, 23640965, 23648743, 25470569, 27070751, 27403655, 27982199, 31189769, 32079542
View all (7 more)
Associate
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly CTD_human_DG 1682667, 18381583, 18388193, 3059976, 6237480, 7440347, 9186818
★☆☆☆☆
Found in Text Mining only
ACTH-Secreting Pituitary Adenoma Pituitary adenoma BEFREE 29678528
★☆☆☆☆
Found in Text Mining only
Acute leukemia Leukemia BEFREE 10873296
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 9598152
★☆☆☆☆
Found in Text Mining only