Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	26039
Gene name	SS18L1 subunit of BAF chromatin remodeling complex
Gene symbol	SS18L1
Synonyms (NCBI Gene)	CRESTLP2261SMARCL2
Chromosome	20
Chromosome location	20q13.33
Summary	This gene encodes a calcium-responsive transactivator which is an essential subunit of a neuron-specific chromatin-remodeling complex. The structure of this gene is similar to that of the SS18 gene. Mutations in this gene are involved in amyotrophic later

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miRTarBase ID	miRNA	Experiments	Reference
MIRT677120	hsa-miR-3155a	HITS-CLIP	23824327
MIRT677119	hsa-miR-3155b	HITS-CLIP	23824327
MIRT677118	hsa-miR-484	HITS-CLIP	23824327
MIRT677117	hsa-miR-125a-3p	HITS-CLIP	23824327
MIRT677116	hsa-miR-764	HITS-CLIP	23824327
MIRT677115	hsa-miR-3934-5p	HITS-CLIP	23824327
MIRT677114	hsa-miR-3663-5p	HITS-CLIP	23824327
MIRT677113	hsa-miR-4454	HITS-CLIP	23824327
MIRT677112	hsa-miR-6131	HITS-CLIP	23824327
MIRT677111	hsa-miR-6801-5p	HITS-CLIP	23824327
MIRT677110	hsa-miR-5587-5p	HITS-CLIP	23824327
MIRT677109	hsa-miR-6843-3p	HITS-CLIP	23824327
MIRT677108	hsa-miR-6848-3p	HITS-CLIP	23824327
MIRT677120	hsa-miR-3155a	HITS-CLIP	23824327
MIRT677119	hsa-miR-3155b	HITS-CLIP	23824327
MIRT677118	hsa-miR-484	HITS-CLIP	23824327
MIRT677117	hsa-miR-125a-3p	HITS-CLIP	23824327
MIRT677116	hsa-miR-764	HITS-CLIP	23824327
MIRT677115	hsa-miR-3934-5p	HITS-CLIP	23824327
MIRT677114	hsa-miR-3663-5p	HITS-CLIP	23824327
MIRT677113	hsa-miR-4454	HITS-CLIP	23824327
MIRT677112	hsa-miR-6131	HITS-CLIP	23824327
MIRT677111	hsa-miR-6801-5p	HITS-CLIP	23824327
MIRT677110	hsa-miR-5587-5p	HITS-CLIP	23824327
MIRT677109	hsa-miR-6843-3p	HITS-CLIP	23824327
MIRT677108	hsa-miR-6848-3p	HITS-CLIP	23824327
MIRT677120	hsa-miR-3155a	HITS-CLIP	23824327
MIRT677119	hsa-miR-3155b	HITS-CLIP	23824327
MIRT677118	hsa-miR-484	HITS-CLIP	23824327
MIRT677117	hsa-miR-125a-3p	HITS-CLIP	23824327
MIRT677116	hsa-miR-764	HITS-CLIP	23824327
MIRT677115	hsa-miR-3934-5p	HITS-CLIP	23824327
MIRT677114	hsa-miR-3663-5p	HITS-CLIP	23824327
MIRT677113	hsa-miR-4454	HITS-CLIP	23824327
MIRT677112	hsa-miR-6131	HITS-CLIP	23824327
MIRT677111	hsa-miR-6801-5p	HITS-CLIP	23824327
MIRT677110	hsa-miR-5587-5p	HITS-CLIP	23824327
MIRT677109	hsa-miR-6843-3p	HITS-CLIP	23824327
MIRT677108	hsa-miR-6848-3p	HITS-CLIP	23824327
MIRT677120	hsa-miR-3155a	HITS-CLIP	23824327
MIRT677119	hsa-miR-3155b	HITS-CLIP	23824327
MIRT677118	hsa-miR-484	HITS-CLIP	23824327
MIRT677117	hsa-miR-125a-3p	HITS-CLIP	23824327
MIRT677116	hsa-miR-764	HITS-CLIP	23824327
MIRT677115	hsa-miR-3934-5p	HITS-CLIP	23824327
MIRT677114	hsa-miR-3663-5p	HITS-CLIP	23824327
MIRT677113	hsa-miR-4454	HITS-CLIP	23824327
MIRT677112	hsa-miR-6131	HITS-CLIP	23824327
MIRT677111	hsa-miR-6801-5p	HITS-CLIP	23824327
MIRT677110	hsa-miR-5587-5p	HITS-CLIP	23824327
MIRT677109	hsa-miR-6843-3p	HITS-CLIP	23824327
MIRT677108	hsa-miR-6848-3p	HITS-CLIP	23824327
MIRT1391528	hsa-miR-1234	CLIP-seq
MIRT1391529	hsa-miR-1284	CLIP-seq
MIRT1391530	hsa-miR-129-5p	CLIP-seq
MIRT1391531	hsa-miR-1305	CLIP-seq
MIRT1391532	hsa-miR-136	CLIP-seq
MIRT1391533	hsa-miR-139-3p	CLIP-seq
MIRT1391534	hsa-miR-150	CLIP-seq
MIRT1391535	hsa-miR-181a	CLIP-seq
MIRT1391536	hsa-miR-181b	CLIP-seq
MIRT1391537	hsa-miR-181c	CLIP-seq
MIRT1391538	hsa-miR-181d	CLIP-seq
MIRT1391539	hsa-miR-193a-3p	CLIP-seq
MIRT1391540	hsa-miR-193b	CLIP-seq
MIRT1391541	hsa-miR-2355-5p	CLIP-seq
MIRT1391542	hsa-miR-29a	CLIP-seq
MIRT1391543	hsa-miR-29b	CLIP-seq
MIRT1391544	hsa-miR-29c	CLIP-seq
MIRT1391545	hsa-miR-3065-3p	CLIP-seq
MIRT1391546	hsa-miR-3155	CLIP-seq
MIRT1391547	hsa-miR-3169	CLIP-seq
MIRT1391548	hsa-miR-3175	CLIP-seq
MIRT1391549	hsa-miR-3187-3p	CLIP-seq
MIRT1391550	hsa-miR-338-5p	CLIP-seq
MIRT1391551	hsa-miR-3605-3p	CLIP-seq
MIRT1391552	hsa-miR-3672	CLIP-seq
MIRT1391553	hsa-miR-3679-3p	CLIP-seq
MIRT1391554	hsa-miR-3934	CLIP-seq
MIRT1391555	hsa-miR-421	CLIP-seq
MIRT1391556	hsa-miR-4262	CLIP-seq
MIRT1391557	hsa-miR-4272	CLIP-seq
MIRT1391558	hsa-miR-4486	CLIP-seq
MIRT1391559	hsa-miR-4495	CLIP-seq
MIRT1391560	hsa-miR-4515	CLIP-seq
MIRT1391561	hsa-miR-4529-5p	CLIP-seq
MIRT1391562	hsa-miR-4639-3p	CLIP-seq
MIRT1391563	hsa-miR-4642	CLIP-seq
MIRT1391564	hsa-miR-4649-5p	CLIP-seq
MIRT1391565	hsa-miR-4665-3p	CLIP-seq
MIRT1391566	hsa-miR-4666-3p	CLIP-seq
MIRT1391567	hsa-miR-4672	CLIP-seq
MIRT1391568	hsa-miR-4700-3p	CLIP-seq
MIRT1391569	hsa-miR-4716-5p	CLIP-seq
MIRT1391570	hsa-miR-4720-5p	CLIP-seq
MIRT1391571	hsa-miR-4731-3p	CLIP-seq
MIRT1391572	hsa-miR-4742-5p	CLIP-seq
MIRT1391573	hsa-miR-4766-5p	CLIP-seq
MIRT1391574	hsa-miR-4773	CLIP-seq
MIRT1391575	hsa-miR-4774-5p	CLIP-seq
MIRT1391576	hsa-miR-4781-3p	CLIP-seq
MIRT1391577	hsa-miR-4789-5p	CLIP-seq
MIRT1391578	hsa-miR-4799-3p	CLIP-seq
MIRT1391579	hsa-miR-4801	CLIP-seq
MIRT1391580	hsa-miR-515-5p	CLIP-seq
MIRT1391581	hsa-miR-520g	CLIP-seq
MIRT1391582	hsa-miR-520h	CLIP-seq
MIRT1391583	hsa-miR-543	CLIP-seq
MIRT1391584	hsa-miR-548a-3p	CLIP-seq
MIRT1391585	hsa-miR-548c-3p	CLIP-seq
MIRT1391586	hsa-miR-548e	CLIP-seq
MIRT1391587	hsa-miR-548f	CLIP-seq
MIRT1391588	hsa-miR-548l	CLIP-seq
MIRT1391589	hsa-miR-548n	CLIP-seq
MIRT1391590	hsa-miR-570	CLIP-seq
MIRT1391591	hsa-miR-676	CLIP-seq
MIRT1391592	hsa-miR-875-5p	CLIP-seq
MIRT1391593	hsa-miR-888	CLIP-seq
MIRT1391528	hsa-miR-1234	CLIP-seq
MIRT1391534	hsa-miR-150	CLIP-seq
MIRT1391565	hsa-miR-4665-3p	CLIP-seq
MIRT1391581	hsa-miR-520g	CLIP-seq
MIRT1391582	hsa-miR-520h	CLIP-seq
MIRT1391532	hsa-miR-136	CLIP-seq
MIRT1391546	hsa-miR-3155	CLIP-seq
MIRT1391554	hsa-miR-3934	CLIP-seq
MIRT1391569	hsa-miR-4716-5p	CLIP-seq
MIRT1391576	hsa-miR-4781-3p	CLIP-seq
MIRT1391580	hsa-miR-515-5p	CLIP-seq
MIRT2117206	hsa-miR-106a	CLIP-seq
MIRT2117207	hsa-miR-106b	CLIP-seq
MIRT1391528	hsa-miR-1234	CLIP-seq
MIRT2117208	hsa-miR-1307	CLIP-seq
MIRT2117209	hsa-miR-132	CLIP-seq
MIRT2117210	hsa-miR-1343	CLIP-seq
MIRT1391532	hsa-miR-136	CLIP-seq
MIRT1391534	hsa-miR-150	CLIP-seq
MIRT2117211	hsa-miR-17	CLIP-seq
MIRT2117212	hsa-miR-1912	CLIP-seq
MIRT1391539	hsa-miR-193a-3p	CLIP-seq
MIRT1391540	hsa-miR-193b	CLIP-seq
MIRT2117213	hsa-miR-1976	CLIP-seq
MIRT2117214	hsa-miR-203	CLIP-seq
MIRT2117215	hsa-miR-20a	CLIP-seq
MIRT2117216	hsa-miR-20b	CLIP-seq
MIRT2117217	hsa-miR-212	CLIP-seq
MIRT2117218	hsa-miR-22	CLIP-seq
MIRT2117219	hsa-miR-23a	CLIP-seq
MIRT2117220	hsa-miR-23b	CLIP-seq
MIRT2117221	hsa-miR-23c	CLIP-seq
MIRT2117222	hsa-miR-302a	CLIP-seq
MIRT2117223	hsa-miR-302b	CLIP-seq
MIRT2117224	hsa-miR-302c	CLIP-seq
MIRT2117225	hsa-miR-302d	CLIP-seq
MIRT2117226	hsa-miR-302e	CLIP-seq
MIRT2117227	hsa-miR-3120-5p	CLIP-seq
MIRT2117228	hsa-miR-3130-5p	CLIP-seq
MIRT2117229	hsa-miR-3140-3p	CLIP-seq
MIRT2117230	hsa-miR-3148	CLIP-seq
MIRT2117231	hsa-miR-3179	CLIP-seq
MIRT2117232	hsa-miR-3194-5p	CLIP-seq
MIRT2117233	hsa-miR-338-3p	CLIP-seq
MIRT2117234	hsa-miR-339-5p	CLIP-seq
MIRT2117235	hsa-miR-3663-3p	CLIP-seq
MIRT2117236	hsa-miR-3688-3p	CLIP-seq
MIRT2117237	hsa-miR-372	CLIP-seq
MIRT2117238	hsa-miR-373	CLIP-seq
MIRT1391554	hsa-miR-3934	CLIP-seq
MIRT2117239	hsa-miR-3942-3p	CLIP-seq
MIRT2117240	hsa-miR-4270	CLIP-seq
MIRT2117241	hsa-miR-4279	CLIP-seq
MIRT2117242	hsa-miR-4328	CLIP-seq
MIRT2117243	hsa-miR-4420	CLIP-seq
MIRT2117244	hsa-miR-4441	CLIP-seq
MIRT2117245	hsa-miR-4461	CLIP-seq
MIRT2117246	hsa-miR-4482	CLIP-seq
MIRT2117247	hsa-miR-4632	CLIP-seq
MIRT1391565	hsa-miR-4665-3p	CLIP-seq
MIRT2117248	hsa-miR-4694-3p	CLIP-seq
MIRT2117249	hsa-miR-4704-3p	CLIP-seq
MIRT1391569	hsa-miR-4716-5p	CLIP-seq
MIRT2117250	hsa-miR-4717-3p	CLIP-seq
MIRT2117251	hsa-miR-4768-5p	CLIP-seq
MIRT2117252	hsa-miR-4778-3p	CLIP-seq
MIRT1391576	hsa-miR-4781-3p	CLIP-seq
MIRT2117253	hsa-miR-498	CLIP-seq
MIRT2117254	hsa-miR-519d	CLIP-seq
MIRT2117255	hsa-miR-520a-3p	CLIP-seq
MIRT2117256	hsa-miR-520b	CLIP-seq
MIRT2117257	hsa-miR-520c-3p	CLIP-seq
MIRT2117258	hsa-miR-520d-3p	CLIP-seq
MIRT2117259	hsa-miR-520e	CLIP-seq
MIRT1391581	hsa-miR-520g	CLIP-seq
MIRT1391582	hsa-miR-520h	CLIP-seq
MIRT2117260	hsa-miR-522	CLIP-seq
MIRT1391585	hsa-miR-548c-3p	CLIP-seq
MIRT2117261	hsa-miR-558	CLIP-seq
MIRT1391590	hsa-miR-570	CLIP-seq
MIRT2117262	hsa-miR-582-5p	CLIP-seq
MIRT2117263	hsa-miR-595	CLIP-seq
MIRT2117264	hsa-miR-93	CLIP-seq
MIRT2117206	hsa-miR-106a	CLIP-seq
MIRT2117207	hsa-miR-106b	CLIP-seq
MIRT2339507	hsa-miR-1226	CLIP-seq
MIRT1391528	hsa-miR-1234	CLIP-seq
MIRT2339508	hsa-miR-1243	CLIP-seq
MIRT2339509	hsa-miR-1255a	CLIP-seq
MIRT2339510	hsa-miR-1255b	CLIP-seq
MIRT2339511	hsa-miR-1277	CLIP-seq
MIRT1391531	hsa-miR-1305	CLIP-seq
MIRT2117209	hsa-miR-132	CLIP-seq
MIRT2339512	hsa-miR-134	CLIP-seq
MIRT2117210	hsa-miR-1343	CLIP-seq
MIRT1391532	hsa-miR-136	CLIP-seq
MIRT1391534	hsa-miR-150	CLIP-seq
MIRT2117211	hsa-miR-17	CLIP-seq
MIRT2339513	hsa-miR-197	CLIP-seq
MIRT2117213	hsa-miR-1976	CLIP-seq
MIRT2339514	hsa-miR-2052	CLIP-seq
MIRT2117215	hsa-miR-20a	CLIP-seq
MIRT2117216	hsa-miR-20b	CLIP-seq
MIRT2117217	hsa-miR-212	CLIP-seq
MIRT2117218	hsa-miR-22	CLIP-seq
MIRT1391541	hsa-miR-2355-5p	CLIP-seq
MIRT1391542	hsa-miR-29a	CLIP-seq
MIRT1391543	hsa-miR-29b	CLIP-seq
MIRT1391544	hsa-miR-29c	CLIP-seq
MIRT2117222	hsa-miR-302a	CLIP-seq
MIRT2117223	hsa-miR-302b	CLIP-seq
MIRT2117224	hsa-miR-302c	CLIP-seq
MIRT2117225	hsa-miR-302d	CLIP-seq
MIRT2117226	hsa-miR-302e	CLIP-seq
MIRT2339515	hsa-miR-3118	CLIP-seq
MIRT2117227	hsa-miR-3120-5p	CLIP-seq
MIRT2339516	hsa-miR-3149	CLIP-seq
MIRT1391546	hsa-miR-3155	CLIP-seq
MIRT2339517	hsa-miR-3164	CLIP-seq
MIRT2117231	hsa-miR-3179	CLIP-seq
MIRT2117232	hsa-miR-3194-5p	CLIP-seq
MIRT2339518	hsa-miR-330-3p	CLIP-seq
MIRT2339519	hsa-miR-331-3p	CLIP-seq
MIRT2339520	hsa-miR-342-5p	CLIP-seq
MIRT2339521	hsa-miR-3662	CLIP-seq
MIRT1391553	hsa-miR-3679-3p	CLIP-seq
MIRT2117237	hsa-miR-372	CLIP-seq
MIRT2117238	hsa-miR-373	CLIP-seq
MIRT1391554	hsa-miR-3934	CLIP-seq
MIRT2339522	hsa-miR-3936	CLIP-seq
MIRT2339523	hsa-miR-412	CLIP-seq
MIRT2117241	hsa-miR-4279	CLIP-seq
MIRT2339524	hsa-miR-4308	CLIP-seq
MIRT2339525	hsa-miR-4313	CLIP-seq
MIRT2117242	hsa-miR-4328	CLIP-seq
MIRT2117243	hsa-miR-4420	CLIP-seq
MIRT2339526	hsa-miR-4501	CLIP-seq
MIRT2339527	hsa-miR-4502	CLIP-seq
MIRT2117247	hsa-miR-4632	CLIP-seq
MIRT2339528	hsa-miR-4664-5p	CLIP-seq
MIRT1391565	hsa-miR-4665-3p	CLIP-seq
MIRT2339529	hsa-miR-4690-3p	CLIP-seq
MIRT2117248	hsa-miR-4694-3p	CLIP-seq
MIRT2339530	hsa-miR-4698	CLIP-seq
MIRT1391569	hsa-miR-4716-5p	CLIP-seq
MIRT2339531	hsa-miR-4719	CLIP-seq
MIRT2339532	hsa-miR-4722-3p	CLIP-seq
MIRT2339533	hsa-miR-4733-3p	CLIP-seq
MIRT2339534	hsa-miR-4760-3p	CLIP-seq
MIRT2339535	hsa-miR-4764-5p	CLIP-seq
MIRT2117252	hsa-miR-4778-3p	CLIP-seq
MIRT1391576	hsa-miR-4781-3p	CLIP-seq
MIRT2117253	hsa-miR-498	CLIP-seq
MIRT2339536	hsa-miR-513b	CLIP-seq
MIRT1391580	hsa-miR-515-5p	CLIP-seq
MIRT2117254	hsa-miR-519d	CLIP-seq
MIRT2117255	hsa-miR-520a-3p	CLIP-seq
MIRT2117256	hsa-miR-520b	CLIP-seq
MIRT2117257	hsa-miR-520c-3p	CLIP-seq
MIRT2117258	hsa-miR-520d-3p	CLIP-seq
MIRT2117259	hsa-miR-520e	CLIP-seq
MIRT1391581	hsa-miR-520g	CLIP-seq
MIRT1391582	hsa-miR-520h	CLIP-seq
MIRT1391583	hsa-miR-543	CLIP-seq
MIRT2117261	hsa-miR-558	CLIP-seq
MIRT2339537	hsa-miR-582-3p	CLIP-seq
MIRT2117262	hsa-miR-582-5p	CLIP-seq
MIRT2339538	hsa-miR-587	CLIP-seq
MIRT2339539	hsa-miR-607	CLIP-seq
MIRT2339540	hsa-miR-767-5p	CLIP-seq
MIRT2117264	hsa-miR-93	CLIP-seq
MIRT1391528	hsa-miR-1234	CLIP-seq
MIRT2395210	hsa-miR-1262	CLIP-seq
MIRT1391532	hsa-miR-136	CLIP-seq
MIRT1391534	hsa-miR-150	CLIP-seq
MIRT2395211	hsa-miR-3065-5p	CLIP-seq
MIRT1391546	hsa-miR-3155	CLIP-seq
MIRT2395212	hsa-miR-4506	CLIP-seq
MIRT1391565	hsa-miR-4665-3p	CLIP-seq
MIRT2395213	hsa-miR-4701-3p	CLIP-seq
MIRT1391569	hsa-miR-4716-5p	CLIP-seq
MIRT1391576	hsa-miR-4781-3p	CLIP-seq
MIRT2395214	hsa-miR-495	CLIP-seq
MIRT2395215	hsa-miR-5095	CLIP-seq
MIRT1391581	hsa-miR-520g	CLIP-seq
MIRT1391582	hsa-miR-520h	CLIP-seq
MIRT2117210	hsa-miR-1343	CLIP-seq
MIRT2117213	hsa-miR-1976	CLIP-seq
MIRT2117227	hsa-miR-3120-5p	CLIP-seq
MIRT2117253	hsa-miR-498	CLIP-seq
MIRT2117210	hsa-miR-1343	CLIP-seq
MIRT2633402	hsa-miR-141	CLIP-seq
MIRT2117213	hsa-miR-1976	CLIP-seq
MIRT2633403	hsa-miR-200a	CLIP-seq
MIRT1391541	hsa-miR-2355-5p	CLIP-seq
MIRT2633404	hsa-miR-27a	CLIP-seq
MIRT2633405	hsa-miR-27b	CLIP-seq
MIRT2117227	hsa-miR-3120-5p	CLIP-seq
MIRT2633406	hsa-miR-3145-5p	CLIP-seq
MIRT2339516	hsa-miR-3149	CLIP-seq
MIRT2633407	hsa-miR-3655	CLIP-seq
MIRT1391553	hsa-miR-3679-3p	CLIP-seq
MIRT2633408	hsa-miR-4257	CLIP-seq
MIRT2633409	hsa-miR-4266	CLIP-seq
MIRT2117241	hsa-miR-4279	CLIP-seq
MIRT2633410	hsa-miR-4477a	CLIP-seq
MIRT1391563	hsa-miR-4642	CLIP-seq
MIRT2633411	hsa-miR-4662a-3p	CLIP-seq
MIRT2633412	hsa-miR-4683	CLIP-seq
MIRT1391570	hsa-miR-4720-5p	CLIP-seq
MIRT2339532	hsa-miR-4722-3p	CLIP-seq
MIRT2633413	hsa-miR-4735-5p	CLIP-seq
MIRT2633414	hsa-miR-4775	CLIP-seq
MIRT2633415	hsa-miR-4794	CLIP-seq
MIRT1391578	hsa-miR-4799-3p	CLIP-seq
MIRT2117253	hsa-miR-498	CLIP-seq
MIRT2633416	hsa-miR-501-3p	CLIP-seq
MIRT2633417	hsa-miR-502-3p	CLIP-seq
MIRT2633418	hsa-miR-513a-5p	CLIP-seq
MIRT2633419	hsa-miR-556-5p	CLIP-seq
MIRT2633420	hsa-miR-590-3p	CLIP-seq
MIRT2633421	hsa-miR-619	CLIP-seq
MIRT2339540	hsa-miR-767-5p	CLIP-seq
MIRT2117210	hsa-miR-1343	CLIP-seq
MIRT2633402	hsa-miR-141	CLIP-seq
MIRT2117213	hsa-miR-1976	CLIP-seq
MIRT2633403	hsa-miR-200a	CLIP-seq
MIRT2117227	hsa-miR-3120-5p	CLIP-seq
MIRT2633406	hsa-miR-3145-5p	CLIP-seq
MIRT2339516	hsa-miR-3149	CLIP-seq
MIRT2117239	hsa-miR-3942-3p	CLIP-seq
MIRT2633408	hsa-miR-4257	CLIP-seq
MIRT2633409	hsa-miR-4266	CLIP-seq
MIRT2633410	hsa-miR-4477a	CLIP-seq
MIRT2633412	hsa-miR-4683	CLIP-seq
MIRT2633413	hsa-miR-4735-5p	CLIP-seq
MIRT2633414	hsa-miR-4775	CLIP-seq
MIRT2633415	hsa-miR-4794	CLIP-seq
MIRT2117253	hsa-miR-498	CLIP-seq
MIRT2633419	hsa-miR-556-5p	CLIP-seq
MIRT2633420	hsa-miR-590-3p	CLIP-seq
MIRT2633421	hsa-miR-619	CLIP-seq

Show/Hide all (21)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000775	Component	Chromosome, centromeric region	IEA
GO:0000776	Component	Kinetochore	IDA	18331714
GO:0000776	Component	Kinetochore	IEA
GO:0000779	Component	Condensed chromosome, centromeric region	IEA
GO:0003713	Function	Transcription coactivator activity	IBA
GO:0005515	Function	Protein binding	IPI	16189514, 21516116, 25416956, 26871637, 32296183, 32814053
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	ISS
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	IEA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005694	Component	Chromosome	IEA
GO:0005829	Component	Cytosol	IDA
GO:0006325	Process	Chromatin organization	IEA
GO:0016358	Process	Dendrite development	IEA
GO:0045893	Process	Positive regulation of DNA-templated transcription	ISS
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IBA
GO:0050775	Process	Positive regulation of dendrite morphogenesis	IBA
GO:0050775	Process	Positive regulation of dendrite morphogenesis	IEA
GO:0071565	Component	NBAF complex	IEA

MIM	HGNC	e!Ensembl
606472	15592	ENSG00000184402

O75177

Protein name

Calcium-responsive transactivator (SS18-like protein 1) (SYT homolog 1)

Protein function

Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regu

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF05030	SSXT	13 → 74	SSXT protein (N-terminal region)	Family

Tissue specificity

TISSUE SPECIFICITY: Ubiquitous; with lowest levels in spleen.

Sequence

MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ

Sequence length

396

Interactions

View interactions

	KEGG
	ATP-dependent chromatin remodeling Transcriptional misregulation in cancer

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (5)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Amyotrophic lateral sclerosis	Conflicting classifications of pathogenicity	ClinVar CTD, ClinGen, Disgenet, GenCC CTD, ClinGen, Disgenet, GenCC CTD, ClinGen, Disgenet, GenCC	★★★★★ ★★★☆☆ Reported in Unknown/Other Associations (≥2 sources)
Gastric cancer	Benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SS18L1-related disorder	Benign; Likely benign; Conflicting classifications of pathogenicity	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Thymoma	Benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Uterine carcinosarcoma	Benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (29)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Acute Cerebrovascular Accidents	Stroke	BEFREE	31603298		★★★★★ ★☆☆☆☆ Found in Text Mining only
Amyotrophic Lateral Sclerosis	Amyotrophic Lateral Sclerosis	BEFREE	24360741, 25888396, 28980860, 30976389, 31390360		★★★★★ ★★★☆☆ Reported in Unknown/Other Associations (≥2 sources)
AMYOTROPHIC LATERAL SCLEROSIS 1	Lateral Sclerosis	GENOMICS_ENGLAND_DG	24360741		★★★★★ ★☆☆☆☆ Found in Text Mining only
Anorexia Nervosa	Anorexia	BEFREE	29607561		★★★★★ ★☆☆☆☆ Found in Text Mining only
Autoimmune Diseases	Autoimmune Diseases	BEFREE	8461929		★★★★★ ★☆☆☆☆ Found in Text Mining only
Bipolar Disorder	Bipolar Disorder	BEFREE	28471066		★★★★★ ★☆☆☆☆ Found in Text Mining only
Calcinosis cutis	Calcinosis cutis	BEFREE	10347101		★★★★★ ★☆☆☆☆ Found in Text Mining only
Cerebrovascular accident	Stroke	BEFREE	30012816		★★★★★ ★☆☆☆☆ Found in Text Mining only
Choledocholithiasis	Choledocholithiasis	BEFREE	31767583		★★★★★ ★☆☆☆☆ Found in Text Mining only
Chromosome 11p11.2 Deletion Syndrome	11p11.2 Deletion Syndrome	BEFREE	2570039		★★★★★ ★☆☆☆☆ Found in Text Mining only
Congenital chromosomal disease	Congenital Chromosomal Disease	BEFREE	10613184, 24680981		★★★★★ ★☆☆☆☆ Found in Text Mining only
CREST Syndrome	CREST Syndrome	BEFREE	29987861		★★★★★ ★☆☆☆☆ Found in Text Mining only
Diffuse Scleroderma	Scleroderma	BEFREE	2568026		★★★★★ ★☆☆☆☆ Found in Text Mining only
Frontotemporal Lobar Degeneration	Frontotemporal dementia	BEFREE	28980860		★★★★★ ★☆☆☆☆ Found in Text Mining only
Graves Disease	Graves Disease	BEFREE	10433096		★★★★★ ★☆☆☆☆ Found in Text Mining only
Lupus Erythematosus, Systemic	Lupus Erythematosus	BEFREE	16445773, 2570039		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	28087132		★★★★★ ★☆☆☆☆ Found in Text Mining only
melanoma	Melanoma	BEFREE	1861861, 29202482		★★★★★ ★☆☆☆☆ Found in Text Mining only
PEELING SKIN SYNDROME	Peeling Skin Syndrome	BEFREE	2570039		★★★★★ ★☆☆☆☆ Found in Text Mining only
Primary biliary cirrhosis	Biliary Cirrhosis	BEFREE	10347101		★★★★★ ★☆☆☆☆ Found in Text Mining only
Roberts-SC phocomelia syndrome	Roberts-SC Phocomelia Syndrome	BEFREE	1809233		★★★★★ ★☆☆☆☆ Found in Text Mining only
Sarcoma Synovial	Synovial sarcoma	Pubtator	27914109, 34504309	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Scleroderma	Scleroderma	BEFREE	2185478, 2568026, 2912883, 29927712, 6309483, 6525895, 7704412, 8461929		★★★★★ ★☆☆☆☆ Found in Text Mining only
Scleroderma Diffuse	Scleroderma	Pubtator	2515813	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Scleroderma, Limited	Scleroderma	BEFREE	12384286		★★★★★ ★☆☆☆☆ Found in Text Mining only
ST segment elevation myocardial infarction	ST Segment Elevation Myocardial Infarction	BEFREE	29074504		★★★★★ ★☆☆☆☆ Found in Text Mining only
synovial sarcoma	Synovial sarcoma	LHGDN	12696068		★★★★★ ★☆☆☆☆ Found in Text Mining only
synovial sarcoma	Synovial sarcoma	BEFREE	16484776, 27914109, 31595587		★★★★★ ★☆☆☆☆ Found in Text Mining only
Systemic Scleroderma	Scleroderma	BEFREE	1378781, 16445773, 2185478, 2568026, 2570039, 2912883, 29927712, 6309483, 6525895, 7704412, 8461929		★★★★★ ★☆☆☆☆ Found in Text Mining only

SS18L1 (SS18L1 subunit of BAF chromatin remodeling complex)