Gene Gene information from NCBI Gene database.
Entrez ID 2542
Gene name Solute carrier family 37 member 4
Gene symbol SLC37A4
Synonyms (NCBI Gene)
CDG2WG6PTG6PT1G6PT2G6PT3GSD1bGSD1cGSD1dPRO0685SPX4TRG-19TRG19
Chromosome 11
Chromosome location 11q23.3
Summary This gene regulates glucose-6-phosphate transport from the cytoplasm to the lumen of the endoplasmic reticulum, in order to maintain glucose homeostasis. It also plays a role in ATP-mediated calcium sequestration in the lumen of the endoplasmic reticulum.
SNPs SNP information provided by dbSNP.
62
SNP ID Visualize variation Clinical significance Consequence
rs80356489 A>G Pathogenic, not-provided Missense variant, coding sequence variant
rs80356490 C>A Pathogenic Missense variant, coding sequence variant
rs80356491 AG>- Pathogenic, likely-pathogenic Frameshift variant, coding sequence variant
rs121908975 C>A,T Pathogenic Coding sequence variant, stop gained, missense variant
rs121908976 C>T Likely-pathogenic, uncertain-significance, pathogenic Coding sequence variant, stop gained
miRNA miRNA information provided by mirtarbase database.
228
miRTarBase ID miRNA Experiments Reference
MIRT046702 hsa-miR-222-3p CLASH 23622248
MIRT041504 hsa-miR-193b-3p CLASH 23622248
MIRT508337 hsa-miR-1272 PAR-CLIP 20371350
MIRT508336 hsa-miR-1322 PAR-CLIP 20371350
MIRT508334 hsa-miR-3682-3p PAR-CLIP 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
29
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 32296183
GO:0005783 Component Endoplasmic reticulum IEA
GO:0005783 Component Endoplasmic reticulum NAS 212064
GO:0005789 Component Endoplasmic reticulum membrane IBA
GO:0005789 Component Endoplasmic reticulum membrane IDA 10318794, 21949678, 33964207
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602671 4061 ENSG00000137700
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O43826
Protein name Glucose-6-phosphate exchanger SLC37A4 (Glucose-5-phosphate transporter) (Glucose-6-phosphate translocase) (Solute carrier family 37 member 4) (Transformation-related gene 19 protein) (TRG-19)
Protein function Inorganic phosphate and glucose-6-phosphate antiporter of the endoplasmic reticulum. Transports cytoplasmic glucose-6-phosphate into the lumen of the endoplasmic reticulum and translocates inorganic phosphate into the opposite direction (PubMed:
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07690 MFS_1 17 381 Major Facilitator Superfamily Family
Tissue specificity TISSUE SPECIFICITY: Mostly expressed in liver and kidney.
Sequence
Sequence length 429
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Carbohydrate digestion and absorption   Glycogen storage disease type Ib (SLC37A4)
Gluconeogenesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
26
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Congenital disorder of glycosylation Likely pathogenic; Pathogenic rs2134626266 RCV001543403
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Congenital disorder of glycosylation, type IIw Likely pathogenic; Pathogenic rs2134626266, rs80356491, rs1943672400, rs121908978, rs121908979, rs121908980, rs1447366650, rs1182102272, rs193302883, rs193302893, rs193302881, rs193302882, rs193302903 RCV001647389
RCV002279712
RCV002496291
RCV002482839
RCV002496292
View all (8 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Glucose-6-phosphate transport defect Likely pathogenic; Pathogenic rs2134633880, rs2134640168, rs2134626765, rs2134631619, rs1943618079, rs2134626266, rs2134633858, rs782612223, rs2134635160, rs2134639714, rs2134637643, rs1001301633, rs2134644045, rs2134638421, rs2134631242
View all (132 more)
RCV001379469
RCV001378593
RCV001390356
RCV001390446
RCV001390723
View all (152 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Glycogen storage disease Pathogenic; Likely pathogenic rs80356490, rs80356491, rs1943676862 RCV005638401
RCV000601076
RCV005638542
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
B-CELL ACUTE LYMPHOBLASTIC LEUKEMIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CONGENITAL DISORDERS OF GLYCOSYLATION Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Gastric cancer Benign; Likely benign; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Anemia Anemia Pubtator 33280276 Associate
★☆☆☆☆
Found in Text Mining only
Anodontia Anodontia Pubtator 27197745 Associate
★☆☆☆☆
Found in Text Mining only
Autoimmune Diseases Autoimmune Diseases BEFREE 29719821
★☆☆☆☆
Found in Text Mining only
Blood Coagulation Disorders Blood coagulation disorder Pubtator 33964207 Associate
★☆☆☆☆
Found in Text Mining only
Brain Neoplasms Brain Neoplasms LHGDN 17460777, 18267120
★☆☆☆☆
Found in Text Mining only
Brain Neoplasms Brain neoplasms Pubtator 38034009 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 33964207 Associate
★☆☆☆☆
Found in Text Mining only
Congenital Disorders of Glycosylation Congenital disorder of glycosylation Pubtator 33964207 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Congenital neutropenia Congenital Neutropenia BEFREE 20008220
★☆☆☆☆
Found in Text Mining only
Diabetes Diabetes BEFREE 10567346
★☆☆☆☆
Found in Text Mining only