Gene Gene information from NCBI Gene database.
Entrez ID 2539
Gene name Glucose-6-phosphate dehydrogenase
Gene symbol G6PD
Synonyms (NCBI Gene)
CNSHA1G6PD1
Chromosome X
Chromosome location Xq28
Summary This gene encodes glucose-6-phosphate dehydrogenase. This protein is a cytosolic enzyme encoded by a housekeeping X-linked gene whose main function is to produce NADPH, a key electron donor in the defense against oxidizing agents and in reductive biosynth
SNPs SNP information provided by dbSNP.
50
SNP ID Visualize variation Clinical significance Consequence
rs1050828 C>T Pathogenic, other, not-provided, conflicting-interpretations-of-pathogenicity, uncertain-significance, drug-response Coding sequence variant, missense variant
rs1050829 T>A,C Pathogenic, other, conflicting-interpretations-of-pathogenicity, likely-benign, benign Coding sequence variant, missense variant
rs2515904 G>C Conflicting-interpretations-of-pathogenicity Intron variant
rs5030868 G>A Pathogenic, other, likely-pathogenic, pathogenic-likely-pathogenic, uncertain-significance Coding sequence variant, missense variant
rs5030869 C>A,T Pathogenic, other Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
213
miRTarBase ID miRNA Experiments Reference
MIRT002956 hsa-miR-1-3p pSILAC 18668040
MIRT002956 hsa-miR-1-3p Luciferase reporter assay 14697198
MIRT018235 hsa-miR-335-5p Microarray 18185580
MIRT002956 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT002956 hsa-miR-1-3p Proteomics 18668040
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
CREM Repression 17273168
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
53
GO ID Ontology Definition Evidence Reference
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IBA
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IDA 15858258, 35122041, 38066190
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IEA
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IMP 743300, 2420826, 5643703
GO:0005515 Function Protein binding IPI 21157431, 24769394, 35122041
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
305900 4057 ENSG00000160211
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P11413
Protein name Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
Protein function Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. The main function of this enzyme is to provide reducing power (NADPH) and pentose ph
PDB 1QKI , 2BH9 , 2BHL , 5UKW , 6E07 , 6E08 , 6JYU , 6VA0 , 6VA7 , 6VA8 , 6VA9 , 6VAQ , 7SEH , 7SEI , 7SNF , 7SNG , 7SNH , 7SNI , 7TOE , 7TOF , 7UAG , 7UAL , 7UC2 , 7ZVD
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00479 G6PD_N 35 210 Glucose-6-phosphate dehydrogenase, NAD binding domain Domain
PF02781 G6PD_C 212 509 Glucose-6-phosphate dehydrogenase, C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Isoform Long is found in lymphoblasts, granulocytes and sperm.
Sequence
Sequence length 515
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Pentose phosphate pathway
Glutathione metabolism
Metabolic pathways
Carbon metabolism
Central carbon metabolism in cancer
Diabetic cardiomyopathy
  TP53 Regulates Metabolic Genes
Pentose phosphate pathway
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
113
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Anemia, nonspherocytic hemolytic, due to G6PD deficiency Likely pathogenic; Pathogenic rs2148328873, rs1557229854, rs979416826, rs2148331380, rs2148331875, rs2148328852, rs2148330566, rs137852324, rs2148328604, rs782315572, rs2070346788, rs72554665, rs782317415, rs2148328905, rs1557230626
View all (172 more)
RCV001377911
RCV001379702
RCV001388767
RCV001420429
RCV001420430
View all (202 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Congenital nonspherocytic hemolytic anemia Likely pathogenic; Pathogenic rs137852339 RCV005410884
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Early-onset coronary artery disease Pathogenic rs137852340 RCV004540993
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial cancer of breast Likely pathogenic; Pathogenic rs137852341 RCV005887423
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANEMIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANEMIA, CONGENITAL, NONSPHEROCYTIC HEMOLYTIC, 1 CTD, HPO
CTD, HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANEMIA, HEMOLYTIC CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANEMIA, HEMOLYTIC, CONGENITAL Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations