Gene Gene information from NCBI Gene database.
Entrez ID 2521
Gene name FUS RNA binding protein
Gene symbol FUS
Synonyms (NCBI Gene)
ALS6ETM4FUS1HNRNPP2POMP75TLSaltFUS
Chromosome 16
Chromosome location 16p11.2
Summary This gene encodes a multifunctional protein component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complex. The hnRNP complex is involved in pre-mRNA splicing and the export of fully processed mRNA to the cytoplasm. This protein belongs to the F
SNPs SNP information provided by dbSNP.
27
SNP ID Visualize variation Clinical significance Consequence
rs72550890 CGGCGGCGGCGG>-,CGG,CGGCGG,CGGCGGCGG,CGGCGGCGGCGGCGG,CGGCGGCGGCGGCGGCGG,CGGCGGCGGCGGCGGCGGCGG,CGGCGGCGGCGGCGGCGGCGGCGG,CGGCGGCGGCGGCGGCGGCGGCGGCGG,CGGCGGCGGCGGCGGCGGCGGCGGCGGCGG Benign, uncertain-significance, likely-benign, conflicting-interpretations-of-pathogenicity Non coding transcript variant, inframe insertion, inframe deletion, coding sequence variant
rs121909667 C>G Pathogenic Non coding transcript variant, coding sequence variant, missense variant
rs121909668 C>A,G,T Pathogenic Non coding transcript variant, coding sequence variant, missense variant
rs121909669 G>A Pathogenic Non coding transcript variant, coding sequence variant, missense variant
rs121909671 G>A,T Pathogenic Non coding transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
619
miRTarBase ID miRNA Experiments Reference
MIRT004196 hsa-miR-197-3p Microarray 16822819
MIRT047505 hsa-miR-10a-5p CLASH 23622248
MIRT047505 hsa-miR-10a-5p CLASH 23622248
MIRT047277 hsa-miR-181b-5p CLASH 23622248
MIRT046900 hsa-miR-221-3p CLASH 23622248
Transcription factors Transcription factors information provided by TRRUST V2 database.
3
Transcription factor Regulation Reference
GTF3A Unknown 12364590
TBP Repression 19841068
TP53 Unknown 12364590
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
47
GO ID Ontology Definition Evidence Reference
GO:0003676 Function Nucleic acid binding IEA
GO:0003677 Function DNA binding IEA
GO:0003682 Function Chromatin binding IDA 25453086, 27731383
GO:0003712 Function Transcription coregulator activity IBA
GO:0003713 Function Transcription coactivator activity IDA 21909421
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
137070 4010 ENSG00000089280
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P35637
Protein name RNA-binding protein FUS (75 kDa DNA-pairing protein) (Oncogene FUS) (Oncogene TLS) (POMp75) (Translocated in liposarcoma protein)
Protein function DNA/RNA-binding protein that plays a role in various cellular processes such as transcription regulation, RNA splicing, RNA transport, DNA repair and damage response (PubMed:27731383). Binds to ssRNA containing the consensus sequence 5'-AGGUAA-3
PDB 2LA6 , 2LCW , 4FDD , 4FQ3 , 5W3N , 5XRR , 5XSG , 5YVG , 5YVH , 5YVI , 6BWZ , 6BXV , 6BZP , 6G99 , 6GBM , 6KJ1 , 6KJ2 , 6KJ3 , 6KJ4 , 6SNJ , 6XFM , 7CYL , 7VQQ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00076 RRM_1 287 365 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Domain
PF00641 zf-RanBP 422 453 Zn-finger in Ran binding protein and others Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous.
Sequence
MASNDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQ
SQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSS
SYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQD
QSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYE
PRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIES
VADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFS
GNPIK
VSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQ
QRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYD
RGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY
Sequence length 526
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  mRNA surveillance pathway
Spliceosome
Amyotrophic lateral sclerosis
Pathways of neurodegeneration - multiple diseases
Transcriptional misregulation in cancer
  mRNA Splicing - Major Pathway
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
39
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Amyotrophic lateral sclerosis 6, autosomal recessive Pathogenic rs121909667 RCV000017608
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Amyotrophic lateral sclerosis type 6 Pathogenic; Likely pathogenic rs2144142389, rs1596914113, rs2144138894, rs2144140268, rs1596912983, rs2544279075, rs2544251972, rs1555509699, rs2544279181, rs886041390, rs1555509605, rs1555509609, rs2544279594, rs121909668, rs121909669
View all (9 more)
RCV001386161
RCV001808069
RCV002008546
RCV001954906
RCV001956250
View all (24 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
FUS-related disorder Pathogenic; Likely pathogenic rs1596912983, rs886041390, rs121909668, rs1555509569 RCV004746544
RCV003401225
RCV003421921
RCV004745160
RCV004722855
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Juvenile amyotrophic lateral sclerosis Pathogenic rs886041390, rs1228194239 RCV001095439
RCV001095440
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Adrenocortical carcinoma, hereditary Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Amyotrophic lateral sclerosis Conflicting classifications of pathogenicity ClinVar
CTD, Disgenet, Orphanet
CTD, Disgenet, Orphanet
CTD, Disgenet, Orphanet
CTD, Disgenet, Orphanet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
AMYOTROPHIC LATERAL SCLEROSIS 6 WITH OR WITHOUT FRONTOTEMPORAL DEMENTIA HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute leukemia Leukemia BEFREE 20620604, 29427188
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 16263589, 20620604
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 26112163, 27278120
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 30141018
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 20620604
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 30367664, 31405128, 32941707 Associate
★☆☆☆☆
Found in Text Mining only
Amnesia Amnesia BEFREE 22833456, 28351997
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 24280224
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 19251627, 19303844, 19593125, 19669651, 19674978, 19741216, 19922450, 19965854, 19967541, 20018407, 20124201, 20138404, 20232451, 20349096, 20385912
View all (293 more)
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis LHGDN 19251627, 19251628
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)