Gene Gene information from NCBI Gene database.
Entrez ID 23291
Gene name F-box and WD repeat domain containing 11
Gene symbol FBXW11
Synonyms (NCBI Gene)
BTRC2BTRCP2FBW1BFBXW1BFbw11HosNEDJED
Chromosome 5
Chromosome location 5q35.1
Summary This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), w
miRNA miRNA information provided by mirtarbase database.
684
miRTarBase ID miRNA Experiments Reference
MIRT019282 hsa-miR-148b-3p Microarray 17612493
MIRT051087 hsa-miR-16-5p CLASH 23622248
MIRT042396 hsa-miR-450a-5p CLASH 23622248
MIRT442267 hsa-miR-4475 PAR-CLIP 22100165
MIRT442268 hsa-miR-4433b-3p PAR-CLIP 22100165
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
50
GO ID Ontology Definition Evidence Reference
GO:0000132 Process Establishment of mitotic spindle orientation IBA
GO:0000151 Component Ubiquitin ligase complex NAS 10531035
GO:0000209 Process Protein polyubiquitination IDA 20347421
GO:0000209 Process Protein polyubiquitination IEA
GO:0000776 Component Kinetochore IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
605651 13607 ENSG00000072803
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9UKB1
Protein name F-box/WD repeat-containing protein 11 (F-box and WD repeats protein beta-TrCP2) (F-box/WD repeat-containing protein 1B) (Homologous to Slimb protein) (HOS)
Protein function Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:10437795, PubMed:10648623, PubMed:11158290
PDB 6WNX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF12125 Beta-TrCP_D 78 116 D domain of beta-TrCP Domain
PF12937 F-box-like 120 170 F-box-like Domain
PF00400 WD40 228 266 WD domain, G-beta repeat Repeat
PF00400 WD40 270 306 WD domain, G-beta repeat Repeat
PF00400 WD40 310 346 WD domain, G-beta repeat Repeat
PF00400 WD40 353 389 WD domain, G-beta repeat Repeat
PF00400 WD40 393 429 WD domain, G-beta repeat Repeat
PF00400 WD40 433 469 WD domain, G-beta repeat Repeat
PF00400 WD40 483 518 WD domain, G-beta repeat Repeat
Sequence
Sequence length 542
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Oocyte meiosis
Ubiquitin mediated proteolysis
Cellular senescence
Wnt signaling pathway
Hedgehog signaling pathway
Hippo signaling pathway
Circadian rhythm
Shigellosis
Human immunodeficiency virus 1 infection
  Activation of NF-kappaB in B cells
Downstream TCR signaling
Regulation of PLK1 Activity at G2/M Transition
FCERI mediated NF-kB activation
Dectin-1 mediated noncanonical NF-kB signaling
CLEC7A (Dectin-1) signaling
NIK-->noncanonical NF-kB signaling
MAP3K8 (TPL2)-dependent MAPK1/3 activation
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
8
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Neurodevelopmental, jaw, eye, and digital syndrome Likely pathogenic; Pathogenic rs1757708758, rs2113754835, rs2113777419, rs1758081491, rs1759346639 RCV001374430
RCV001374429
RCV001374428
RCV001374427
RCV001175173
View all (1 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CENTRAL NERVOUS SYSTEM CANCER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
FBXW11-related disorder Uncertain significance; Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
FBXW11-related neurodevelopmental, brain, eye, and digit anomalies Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
GLIOBLASTOMA MULTIFORME GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 26845116
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Multiple polyposis syndrome BEFREE 17510365
★☆☆☆☆
Found in Text Mining only
Atypical Teratoid Rhabdoid Tumor Teratoid Rhabdoid Tumor BEFREE 23816608
★☆☆☆☆
Found in Text Mining only
Carcinoma of bladder Bladder carcinoma BEFREE 8262676
★☆☆☆☆
Found in Text Mining only
cervical cancer Cervical Cancer BEFREE 31832017
★☆☆☆☆
Found in Text Mining only
Cervix carcinoma Cervix carcinoma BEFREE 31832017
★☆☆☆☆
Found in Text Mining only
Chondrosarcoma Chondrosarcoma Pubtator 36404534 Inhibit
★☆☆☆☆
Found in Text Mining only
Cleidocranial Dysplasia Cleidocranial dysplasia Pubtator 37199076 Stimulate
★☆☆☆☆
Found in Text Mining only
Epithelioma Epithelioma BEFREE 8262676
★☆☆☆☆
Found in Text Mining only
Esophageal carcinoma Esophageal Carcinoma BEFREE 9425296
★☆☆☆☆
Found in Text Mining only