Gene Gene information from NCBI Gene database.
Entrez ID 2317
Gene name Filamin B
Gene symbol FLNB
Synonyms (NCBI Gene)
ABP-278ABP-280AOIFH1FLN-BFLN1LLRS1SCTTABPTAP
Chromosome 3
Chromosome location 3p14.3
Summary This gene encodes a member of the filamin family. The encoded protein interacts with glycoprotein Ib alpha as part of the process to repair vascular injuries. The platelet glycoprotein Ib complex includes glycoprotein Ib alpha, and it binds the actin cyto
SNPs SNP information provided by dbSNP.
57
SNP ID Visualize variation Clinical significance Consequence
rs28937587 G>C Pathogenic, likely-pathogenic Missense variant, coding sequence variant
rs77934864 C>T Conflicting-interpretations-of-pathogenicity Synonymous variant, coding sequence variant
rs80356493 T>A,G Pathogenic Missense variant, coding sequence variant
rs80356494 T>A,G Pathogenic Missense variant, coding sequence variant
rs80356495 G>T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
224
miRTarBase ID miRNA Experiments Reference
MIRT020752 hsa-miR-155-5p Proteomics 18668040
MIRT021361 hsa-miR-9-5p Microarray 17612493
MIRT023750 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT051871 hsa-let-7c-5p CLASH 23622248
MIRT049532 hsa-miR-92a-3p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
34
GO ID Ontology Definition Evidence Reference
GO:0001725 Component Stress fiber IEA
GO:0003334 Process Keratinocyte development IEA
GO:0003382 Process Epithelial cell morphogenesis IEA
GO:0003723 Function RNA binding HDA 22681889
GO:0003779 Function Actin binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603381 3755 ENSG00000136068
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75369
Protein name Filamin-B (FLN-B) (ABP-278) (ABP-280 homolog) (Actin-binding-like protein) (Beta-filamin) (Filamin homolog 1) (Fh1) (Filamin-3) (Thyroid autoantigen) (Truncated actin-binding protein) (Truncated ABP)
Protein function Connects cell membrane constituents to the actin cytoskeleton. May promote orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton. Interaction
PDB 2DI8 , 2DI9 , 2DIA , 2DIB , 2DIC , 2DJ4 , 2DLG , 2DMB , 2DMC , 2E9I , 2E9J , 2EE6 , 2EE9 , 2EEA , 2EEB , 2EEC , 2EED , 2WA5 , 2WA6 , 2WA7 , 3FER , 4B7L , 5DCP
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00307 CH 16 123 Calponin homology (CH) domain Domain
PF00307 CH 139 243 Calponin homology (CH) domain Domain
PF00630 Filamin 251 344 Filamin/ABP280 repeat Domain
PF00630 Filamin 351 443 Filamin/ABP280 repeat Domain
PF00630 Filamin 449 540 Filamin/ABP280 repeat Domain
PF00630 Filamin 546 633 Filamin/ABP280 repeat Domain
PF00630 Filamin 642 733 Filamin/ABP280 repeat Domain
PF00630 Filamin 739 836 Filamin/ABP280 repeat Domain
PF00630 Filamin 842 935 Filamin/ABP280 repeat Domain
PF00630 Filamin 941 1031 Filamin/ABP280 repeat Domain
PF00630 Filamin 1037 1124 Filamin/ABP280 repeat Domain
PF00630 Filamin 1130 1219 Filamin/ABP280 repeat Domain
PF00630 Filamin 1225 1319 Filamin/ABP280 repeat Domain
PF00630 Filamin 1325 1412 Filamin/ABP280 repeat Domain
PF00630 Filamin 1418 1508 Filamin/ABP280 repeat Domain
PF00630 Filamin 1514 1605 Filamin/ABP280 repeat Domain
PF00630 Filamin 1611 1701 Filamin/ABP280 repeat Domain
PF00630 Filamin 1735 1813 Filamin/ABP280 repeat Domain
PF00630 Filamin 1818 1905 Filamin/ABP280 repeat Domain
PF00630 Filamin 1999 2086 Filamin/ABP280 repeat Domain
PF00630 Filamin 2098 2182 Filamin/ABP280 repeat Domain
PF00630 Filamin 2190 2277 Filamin/ABP280 repeat Domain
PF00630 Filamin 2286 2372 Filamin/ABP280 repeat Domain
PF00630 Filamin 2381 2468 Filamin/ABP280 repeat Domain
PF00630 Filamin 2509 2598 Filamin/ABP280 repeat Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Isoform 1 and isoform 2 are expressed in placenta, bone marrow, brain, umbilical vein endothelial cells (HUVEC), retina and skeletal muscle. Isoform 1 is predominantly expressed in prostate, uterus, liver, thyroid, stomach,
Sequence
MPVTEKDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQK
RMYRKYHQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILH
YSI
SMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGALVDSCAP
GLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFPKA
KLK
PGAPLKPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNK
EEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFE
VSVDKAQGDASKVTAK
GPGLEAVGNIANKPTYFDIYTAGAGVGDIGVEVEDPQGKNTVELLVEDKGNQVYRCVYKP
MQPGPHVVKIFFAGDTIPKSPFV
VQVGEACNPNACRASGRGLQPKGVRIRETTDFKVDTK
AAGSGELGVTMKGPKGLEELVKQKDFLDGVYAFEYYPSTPGRYSIAITWGGHHIPKSPFE

VQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVESIGSEVGSLGFAIEGPSQAKIEYNDQN
DGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYM
AFIHPATGGYNPDLVRAYGPGLEKSGC
IVNNLAEFTVDPKDAGKAPLKIFAQDGEGQRIDIQMKNRMDGTYACSYTPVKAIKHTIAV
VWGGVNIPHSPYR
VNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVG
IKCDARVLSEDEEDVDFDIIHNANDTFTVKYVPPAAGRYTIKVLFASQEIPASPFR
VKVD
PSHDASKVKAEGPGLSKAGVENGKPTHFTVYTKGAGKAPLNVQFNSPLPGDAVKDLDIID
NYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFT
VGVAAPLDLSKIKLNGLENRVEVGK
DQEFTVDTRGAGGQGKLDVTILSPSRKVVPCLVTPVTGRENSTAKFIPREEGLYAVDVTY
DGHPVPGSPYT
VEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEGP
CEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFK
ADIEMPFDPSKVVASG
PGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAG
MYTLTMKYGGELVPHFPAR
VKVEPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQ
VGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFK
V
AVTEGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKINCRDNKD
GSCSAEYIPFAPGDYDVNITYGGAHIPGSPFR
VPVKDVVDPSKVKIAGPGLGSGVRARVL
QSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADE
EIPRSPFK
VKVLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQE
GKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYR
IRATQTGDASKCLAT
GPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAK
PGTYVIYVRFGGVDIPNSPFT
VMATDGEVTAVEEAPVNACPPGFRPWVTEEAYVPVSDMN
GLGFKPFDLVIPFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHI
KYMGSHIPESPLQ
FYVNYPNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEG
PSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFT
AKITDDSRRCSQVKL
GSAADFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKK
NGNHVANSPVSIMVVQSEIGDARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVE
GPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFT
VKISGEGRVKESIT
RTSRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQ
EMGVHTVSVKYRGQHVTGSPFQ
FTVGPLGEGGAHKVRAGGPGLERGEAGVPAEFSIWTRE
AGAGGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYL
VPV
IAPSDDARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELEP
DKYAVRFIPHENGVHTIDVKFNGSHVVGSPFK
VRVGEPGQAGNPALVSAYGTGLEGGTTG
IQSEFFINTTRAGPGTLSVTIEGPSKVKMDCQETPEGYKVMYTPMAPGNYLISVKYGGPN
HIVGSPFK
AKVTGQRLVSPGSANETSSILVESVTRSSTETCYSAIPKASSDASKVTSKGA
GLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGNQQYNVTYVVKERGD
YVLAVKWGEEHIPGSPFH
VTVP
Sequence length 2602
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Focal adhesion   ISG15 antiviral mechanism
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
58
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormality of the skeletal system Likely pathogenic; Pathogenic rs1553704446 RCV001814201
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Atelosteogenesis type I Pathogenic; Likely pathogenic rs587777259, rs2107224894, rs121908894, rs121908895, rs80356503, rs2471006494, rs80356504 RCV000114316
RCV002249990
RCV000006770
RCV000006771
RCV004795380
View all (2 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Atelosteogenesis type III Pathogenic; Likely pathogenic rs121908895, rs28937587, rs80356503, rs80356504, rs2097257677, rs2097209399 RCV000006772
RCV000006773
RCV004795380
RCV005411303
RCV001169838
View all (1 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Boomerang dysplasia Pathogenic; Likely pathogenic rs80356494, rs121908896, rs80356503, rs80356504 RCV000006774
RCV000006775
RCV004795380
RCV005411303
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Abnormality of the vertebral column Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AORTIC STENOSIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Accessory carpal bones Accessory carpal bones HPO_DG
★☆☆☆☆
Found in Text Mining only
Allergic rhinitis (disorder) Allergic rhinitis BEFREE 17982230
★☆☆☆☆
Found in Text Mining only
Alloimmunisation Alloimmunisation BEFREE 8727210
★☆☆☆☆
Found in Text Mining only
Ankylosing spondylitis Ankylosing Spondylitis BEFREE 17082617, 19404951, 19480848, 25187574, 28405734, 7652740, 8311558, 8770637, 8912512, 9864038
★☆☆☆☆
Found in Text Mining only
Antisocial Personality Disorder Antisocial personality disorder Pubtator 25918995 Associate
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder BEFREE 30035341
★☆☆☆☆
Found in Text Mining only
Anxiety Disorders Anxiety Disorder BEFREE 30035341
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Aortic Aneurysm HPO_DG
★☆☆☆☆
Found in Text Mining only
Appendicitis Appendicitis BEFREE 30671804
★☆☆☆☆
Found in Text Mining only
Arthritis, Psoriatic Psoriatic Arthritis BEFREE 8911997
★☆☆☆☆
Found in Text Mining only