Gene Gene information from NCBI Gene database.
Entrez ID 2301
Gene name Forkhead box E3
Gene symbol FOXE3
Synonyms (NCBI Gene)
AAT11ASGD2CATC3CTRCT34FKHL12FREAC8
Chromosome 1
Chromosome location 1p33
Summary This intronless gene belongs to the forkhead family of transcription factors, which is characterized by a distinct forkhead domain. The protein encoded functions as a lens-specific transcription factor and plays an important role in vertebrate lens format
miRNA miRNA information provided by mirtarbase database.
36
miRTarBase ID miRNA Experiments Reference
MIRT1001627 hsa-miR-122 CLIP-seq
MIRT1001628 hsa-miR-149 CLIP-seq
MIRT1001629 hsa-miR-2115 CLIP-seq
MIRT1001630 hsa-miR-224 CLIP-seq
MIRT1001631 hsa-miR-3064-5p CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
46
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin ISA
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific ISA
GO:0001654 Process Eye development IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601094 3808 ENSG00000186790
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q13461
Protein name Forkhead box protein E3 (Forkhead-related protein FKHL12) (Forkhead-related transcription factor 8) (FREAC-8)
Protein function Transcription factor that controls lens epithelial cell growth through regulation of proliferation, apoptosis and cell cycle (PubMed:22527307, PubMed:25504734). During lens development, controls the ratio of the lens fiber cells to the cells of
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00250 Forkhead 70 156 Forkhead domain Domain
Sequence
MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPG
RRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIR
HNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFD
NGSFLRRRKRFKRAELPAHAAAAP
GPPLPFPYAPYAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLGAPEPPCC
AAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAEPLLALAGPAAALGPLS
PGEAYLRQPGFASGLERYL
Sequence length 319
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
21
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Anterior segment dysgenesis Pathogenic; Likely pathogenic rs1464817302, rs1035206433, rs958241794, rs2124042660, rs1465921700, rs958293767, rs2521317897, rs80358194, rs1325345116, rs1176723126, rs2521321688, rs1167122307, rs377669670, rs1646883385, rs762006562 RCV003771269
RCV001930870
RCV001958937
RCV001921609
RCV001948196
View all (10 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Cardiovascular phenotype Likely pathogenic; Pathogenic rs377669670 RCV004023273
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cataract 34 multiple types Pathogenic rs2124045186, rs387906793, rs1057518738 RCV001391241
RCV001391240
RCV000412546
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Congenital primary aphakia Pathogenic; Likely pathogenic rs1464817302, rs2124041750, rs2124042297, rs772347736, rs2124043339, rs1035206433, rs958241794, rs2124042660, rs1465921700, rs1646884931, rs958293767, rs2521317897, rs1570406175, rs80358194, rs1325345116
View all (9 more)
RCV001391232
RCV001391233
RCV001391234
RCV001391237
RCV001391235
View all (19 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute aortic dissection Conflicting classifications of pathogenicity; Uncertain significance; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Anterior segment dysgenesis 1 Benign; Uncertain significance ClinVar
Disgenet, GWAS catalog
Disgenet, GWAS catalog
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
ANTERIOR SEGMENT DYSGENESIS 2 HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANTERIOR SEGMENT MESENCHYMAL DYSGENESIS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Aniridia Aniridia BEFREE 20806047
★☆☆☆☆
Found in Text Mining only
Aniridia Aniridia Pubtator 20806047, 34046667 Associate
★☆☆☆☆
Found in Text Mining only
Aniridia Aniridia HPO_DG
★☆☆☆☆
Found in Text Mining only
Anophthalmia with pulmonary hypoplasia Anophthalmia Pubtator 22204637 Associate
★☆☆☆☆
Found in Text Mining only
Anophthalmos Syndromic microphthalmia BEFREE 20140963
★☆☆☆☆
Found in Text Mining only
Anophthalmos Anophthalmia Pubtator 22204637 Associate
★☆☆☆☆
Found in Text Mining only
Anterior segment developmental anomaly Anterior segment anomalies Orphanet
★☆☆☆☆
Found in Text Mining only
ANTERIOR SEGMENT DYSGENESIS 1 Segment dysgenesis GENOMICS_ENGLAND_DG 21150893, 24859618, 3550563
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
ANTERIOR SEGMENT DYSGENESIS 1 Segment dysgenesis ORPHANET_DG 21150893
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Anterior segment mesenchymal dysgenesis Anterior segment dysgenesis BEFREE 11159941, 27218149
★★☆☆☆
Found in Text Mining + Unknown/Other Associations