Gene Gene information from NCBI Gene database.
Entrez ID 22954
Gene name Tripartite motif containing 32
Gene symbol TRIM32
Synonyms (NCBI Gene)
BBS11HT2ALGMD2HLGMDR8TATIP
Chromosome 9
Chromosome location 9q33.1
Summary The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to cytoplasmic bodies. The p
miRNA miRNA information provided by mirtarbase database.
237
miRTarBase ID miRNA Experiments Reference
MIRT001492 hsa-miR-155-5p pSILAC 18668040
MIRT001492 hsa-miR-155-5p Proteomics;Other 18668040
MIRT031385 hsa-miR-16-5p Proteomics 18668040
MIRT001492 hsa-miR-155-5p MicroarrayqRT-PCR 25128227
MIRT001492 hsa-miR-155-5p MicroarrayqRT-PCR 25128227
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
106
GO ID Ontology Definition Evidence Reference
GO:0000045 Process Autophagosome assembly IDA 37943659
GO:0000045 Process Autophagosome assembly IDA 37943659
GO:0000045 Process Autophagosome assembly IMP 22170151
GO:0000209 Process Protein polyubiquitination IDA 18632609
GO:0000209 Process Protein polyubiquitination IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602290 16380 ENSG00000119401
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q13049
Protein name E3 ubiquitin-protein ligase TRIM32 (EC 2.3.2.27) (72 kDa Tat-interacting protein) (RING-type E3 ubiquitin transferase TRIM32) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
Protein function E3 ubiquitin ligase that plays a role in various biological processes including neural stem cell differentiation, innate immunity, inflammatory resonse and autophagy (PubMed:19349376, PubMed:31123703). Plays a role in virus-triggered induction o
PDB 2CT2 , 5FEY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13445 zf-RING_UBOX 20 62 RING-type zinc-finger Domain
PF01436 NHL 371 398 NHL repeat Repeat
PF01436 NHL 469 496 NHL repeat Repeat
PF01436 NHL 616 643 NHL repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Spleen, thymus, prostate, testis, ovary, intestine, colon and skeletal muscle. {ECO:0000269|PubMed:11822024}.
Sequence
MAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVR
CP
FCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLC
EPCREADHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKAALEGVSKDLQAR
YKAVLQEYGHEERRVQDELARSRKFFTGSLAEVEKSNSQVVEEQSYLLNIAEVQAVSRCD
YFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRT
VNVEDSWAMEATASAASTSVTFREMDMSPEEVVASPRASPAKQRGPEAASNIQQCLFLKK
MGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLS
FLGADLPNLTPLSVAMNCQGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPS
GQFVVTDVEGGKLWCF
TVDRGSGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENR
QNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEIL
HFPKGGGYSVLIREGLTCPVGIALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP
Sequence length 653
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Ubiquitin mediated proteolysis   Regulation of innate immune responses to cytosolic DNA
Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
16
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Autosomal recessive limb-girdle muscular dystrophy Likely pathogenic; Pathogenic rs2491056549, rs749696299 RCV002281786
RCV003155382
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Bardet-Biedl syndrome Pathogenic; Likely pathogenic rs2132072043, rs1180939705, rs1272966742, rs2132072315, rs2132075143, rs2132071763, rs2491060020, rs2491063488, rs111033570, rs111033571, rs1588218453, rs886044106, rs770884964, rs2491061793, rs2491058742
View all (21 more)
RCV001390764
RCV001385099
RCV001941825
RCV002007240
RCV001921635
View all (31 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Bardet-Biedl syndrome 11 Likely pathogenic; Pathogenic rs2132072315, rs111033570, rs111033571, rs1588218453, rs2491063018, rs2491068460, rs746321506, rs759376012, rs747685252, rs1564217246, rs749696299 RCV005042586
RCV001198489
RCV000007776
RCV001198484
RCV003142233
View all (6 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Limb-girdle muscular dystrophy Likely pathogenic; Pathogenic rs747685252 RCV000611170
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
AUTOSOMAL RECESSIVE LIMB-GIRDLE MUSCULAR DYSTROPHY TYPE 2H ClinGen
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIMB-GIRDLE MUSCULAR DYSTROPHY AUTOSOMAL RECESSIVE Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIMB-GIRDLE MUSCULAR DYSTROPHY TYPE 2H CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Limb-girdle muscular dystrophy, recessive Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adult Medulloblastoma Medulloblastoma BEFREE 31527798
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic lateral sclerosis Pubtator 23469062 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 32145086 Associate
★☆☆☆☆
Found in Text Mining only
Atrophy Atrophy Pubtator 31234693 Associate
★☆☆☆☆
Found in Text Mining only
Attention Deficit Disorder with Hyperactivity Attention deficit hyperactivity disorder Pubtator 24381304 Associate
★☆☆☆☆
Found in Text Mining only
Attention deficit hyperactivity disorder Attention Deficit Hyperactivity Disorder BEFREE 21832240
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorder Autism Pubtator 24381304 Associate
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorders Autism Spectrum Disorder BEFREE 21832240, 24381304, 31828304
★☆☆☆☆
Found in Text Mining only
Autistic behavior Autism BEFREE 31828304
★☆☆☆☆
Found in Text Mining only
Bardet-Biedl Syndrome Bardet-Biedl Syndrome CLINVAR_DG 11822024, 15786463, 21775502, 23142638
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)