Gene Gene information from NCBI Gene database.
Entrez ID 22818
Gene name Coat protein complex I subunit zeta 1
Gene symbol COPZ1
Synonyms (NCBI Gene)
CGI-120COPZHSPC181zeta-COPzeta1-COP
Chromosome 12
Chromosome location 12q13.13
Summary This gene encodes a subunit of the cytoplasmic coatamer protein complex, which is involved in autophagy and intracellular protein trafficking. The coatomer protein complex is comprised of seven subunits and functions as the coat protein of coat protein co
miRNA miRNA information provided by mirtarbase database.
320
miRTarBase ID miRNA Experiments Reference
MIRT023745 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT052614 hsa-let-7a-5p CLASH 23622248
MIRT038152 hsa-miR-423-5p CLASH 23622248
MIRT482737 hsa-miR-1296-3p PAR-CLIP 23592263
MIRT482736 hsa-miR-6868-5p PAR-CLIP 23592263
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
26
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IEA
GO:0000139 Component Golgi membrane TAS
GO:0005737 Component Cytoplasm IEA
GO:0005789 Component Endoplasmic reticulum membrane TAS
GO:0005794 Component Golgi apparatus IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
615472 2243 ENSG00000111481
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P61923
Protein name Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
Protein function The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi ne
PDB 2HF6 , 5MC7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01217 Clat_adaptor_s 12 153 Clathrin adaptor complex small chain Domain
Sequence
Sequence length 177
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
2
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Clear cell carcinoma of kidney Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
VENOUS THROMBOEMBOLISM GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Carcinogenesis Carcinogenesis Pubtator 37107648 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 37107648 Associate
★☆☆☆☆
Found in Text Mining only
Cognition Disorders Cognition disorder Pubtator 26566043 Associate
★☆☆☆☆
Found in Text Mining only
Glioblastoma Glioblastoma Pubtator 33420375 Associate
★☆☆☆☆
Found in Text Mining only
Glioma Glioma Pubtator 33420375 Associate
★☆☆☆☆
Found in Text Mining only
Hypoxia Hypoxia Pubtator 37107648 Associate
★☆☆☆☆
Found in Text Mining only
Impaired cognition Impaired Cognition BEFREE 26566043
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of thyroid Thyroid cancer BEFREE 28951131
★☆☆☆☆
Found in Text Mining only
Neoplasms Neoplasms BEFREE 21746916, 28951131
★☆☆☆☆
Found in Text Mining only
Parkinson Disease Parkinson disease Pubtator 26566043 Associate
★☆☆☆☆
Found in Text Mining only