Gene Gene information from NCBI Gene database.
Entrez ID 2266
Gene name Fibrinogen gamma chain
Gene symbol FGG
Synonyms (NCBI Gene)
-
Chromosome 4
Chromosome location 4q32.1
Summary The protein encoded by this gene is the gamma component of fibrinogen, a blood-borne glycoprotein comprised of three pairs of nonidentical polypeptide chains. Following vascular injury, fibrinogen is cleaved by thrombin to form fibrin which is the most ab
SNPs SNP information provided by dbSNP.
16
SNP ID Visualize variation Clinical significance Consequence
rs6063 C>T Likely-benign, uncertain-significance, pathogenic Coding sequence variant, missense variant
rs78257946 C>T Likely-pathogenic Missense variant, coding sequence variant
rs121913087 G>A Other, pathogenic Missense variant, coding sequence variant
rs121913088 C>T Other, pathogenic Missense variant, coding sequence variant
rs138511699 G>A,C Likely-pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
41
miRTarBase ID miRNA Experiments Reference
MIRT005519 hsa-miR-409-3p ELISAFlowLuciferase reporter assay 20570858
MIRT005521 hsa-miR-29a-3p ELISAFlowLuciferase reporter assay 20570858
MIRT005522 hsa-miR-29b-3p ELISAFlowLuciferase reporter assay 20570858
MIRT005523 hsa-miR-144-3p ELISAFlowLuciferase reporter assay 20570858
MIRT005525 hsa-miR-29c-3p Luciferase reporter assay 20570858
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
STAT3 Activation 11460505
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
64
GO ID Ontology Definition Evidence Reference
GO:0005102 Function Signaling receptor binding IBA
GO:0005102 Function Signaling receptor binding IEA
GO:0005102 Function Signaling receptor binding IPI 7822297
GO:0005198 Function Structural molecule activity IDA 8910396
GO:0005201 Function Extracellular matrix structural constituent HDA 28344315
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
134850 3694 ENSG00000171557
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P02679
Protein name Fibrinogen gamma chain
Protein function Together with fibrinogen alpha (FGA) and fibrinogen beta (FGB), polymerizes to form an insoluble fibrin matrix. Has a major function in hemostasis as one of the primary components of blood clots. In addition, functions during the early stages of
PDB 1DUG , 1FIB , 1FIC , 1FID , 1FZA , 1FZB , 1FZC , 1FZE , 1FZF , 1FZG , 1LT9 , 1LTJ , 1N86 , 1N8E , 1RE3 , 1RE4 , 1RF0 , 1RF1 , 2A45 , 2FFD , 2FIB , 2H43 , 2HLO , 2HOD , 2HPC , 2HWL , 2OYH , 2OYI , 2Q9I , 2VDO , 2VDP , 2VDQ , 2VDR , 2VR3 , 2XNX , 2XNY , 2Y7L , 2Z4E , 3BVH , 3E1I , 3FIB , 3GHG , 3H32 , 3HUS , 4B60
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08702 Fib_alpha 30 172 Fibrinogen alpha/beta chain family Coiled-coil
PF00147 Fibrinogen_C 175 415 Fibrinogen beta and gamma chains, C-terminal globular domain Domain
Tissue specificity TISSUE SPECIFICITY: Detected in blood plasma (at protein level). {ECO:0000269|PubMed:10074346, ECO:0000269|PubMed:19296670, ECO:0000269|PubMed:9628725}.
Sequence
Sequence length 453
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Complement and coagulation cascades
Platelet activation
Neutrophil extracellular trap formation
Staphylococcus aureus infection
Coronavirus disease - COVID-19
  Platelet degranulation
Common Pathway of Fibrin Clot Formation
Integrin cell surface interactions
Integrin signaling
GRB2:SOS provides linkage to MAPK signaling for Integrins
p130Cas linkage to MAPK signaling for integrins
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
MAP2K and MAPK activation
Regulation of TLR by endogenous ligand
Signaling by moderate kinase activity BRAF mutants
Signaling by high-kinase activity BRAF mutants
Signaling by BRAF and RAF fusions
Paradoxical activation of RAF signaling by kinase inactive BRAF
Post-translational protein phosphorylation
Signaling downstream of RAS mutants
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
45
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormal bleeding Pathogenic rs1578812509 RCV000851634
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Afibrinogenemia Likely pathogenic; Pathogenic rs121913087 RCV002243649
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Congenital afibrinogenemia Pathogenic; Likely pathogenic rs75848804, rs121913088, rs587776837, rs587776838, rs587776839, rs1553965519, rs1578810856 RCV005412537
RCV005229813
RCV000017798
RCV000017799
RCV000017802
View all (2 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Familial dysfibrinogenemia Pathogenic; Likely pathogenic rs2110850824, rs75848804, rs121913094, rs1553965518, rs121913087, rs121913088, rs121913091, rs2530855793, rs1578812509 RCV001730003
RCV005412537
RCV003444468
RCV003447705
RCV002272022
View all (4 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
BLOOD COAGULATION DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARDIOEMBOLIC STROKE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CHRONIC THROMBOEMBOLIC PULMONARY HYPERTENSION GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CONGENITAL FIBRINOGEN DEFICIENCY ClinGen, Disgenet, GWAS catalog
ClinGen, Disgenet, GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Activated Protein C Resistance Activated Protein C Resistance BEFREE 24951429
★☆☆☆☆
Found in Text Mining only
Afibrinogenemia Afibrinogenemia Pubtator 10891444, 11001902, 16959688, 17854317, 25038212, 26039544, 27520927, 29240685, 29769041, 32228225, 32698516, 34196169, 40310436 Associate
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Afibrinogenemia Afibrinogenemia BEFREE 11001902, 11354637
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Afibrinogenemia Afibrinogenemia LHGDN 15284111
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Afibrinogenemia Afibrinogenemia CTD_human_DG
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Amyloidosis Familial Amyloidosis Pubtator 29240685 Associate
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic lateral sclerosis Pubtator 39278909 Associate
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 17264959, 18772067
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis BEFREE 30770760
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis Pubtator 30770760 Associate
★☆☆☆☆
Found in Text Mining only