FAM13C (family with sequence similarity 13 member C)

Gene

• Entrez ID: 220965
• Gene name: Family with sequence similarity 13 member C
• Gene symbol: FAM13C
• Synonyms (NCBI Gene): FAM13C1
• Chromosome: 10
• Chromosome location: 10q21.1

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT052390	hsa-let-7a-5p	CLASH	23622248
MIRT483235	hsa-miR-5193	PAR-CLIP	22012620
MIRT483234	hsa-miR-660-3p	PAR-CLIP	22012620
MIRT483233	hsa-miR-627-3p	PAR-CLIP	22012620
MIRT483232	hsa-miR-202-5p	PAR-CLIP	22012620
MIRT483231	hsa-miR-4691-5p	PAR-CLIP	22012620
MIRT483230	hsa-miR-6792-3p	PAR-CLIP	22012620
MIRT483229	hsa-miR-6749-3p	PAR-CLIP	22012620
MIRT483228	hsa-miR-670-3p	PAR-CLIP	22012620
MIRT483227	hsa-miR-1238-3p	PAR-CLIP	22012620
MIRT483235	hsa-miR-5193	PAR-CLIP	23592263
MIRT483234	hsa-miR-660-3p	PAR-CLIP	23592263
MIRT483233	hsa-miR-627-3p	PAR-CLIP	23592263
MIRT483232	hsa-miR-202-5p	PAR-CLIP	23592263
MIRT483231	hsa-miR-4691-5p	PAR-CLIP	23592263
MIRT483230	hsa-miR-6792-3p	PAR-CLIP	23592263
MIRT483229	hsa-miR-6749-3p	PAR-CLIP	23592263
MIRT483228	hsa-miR-670-3p	PAR-CLIP	23592263
MIRT483227	hsa-miR-1238-3p	PAR-CLIP	23592263
MIRT483227	hsa-miR-1238-3p	PAR-CLIP	27292025
MIRT483227	hsa-miR-1238-3p	PAR-CLIP	27292025
MIRT483232	hsa-miR-202-5p	PAR-CLIP	27292025
MIRT483232	hsa-miR-202-5p	PAR-CLIP	27292025
MIRT483231	hsa-miR-4691-5p	PAR-CLIP	27292025
MIRT483231	hsa-miR-4691-5p	PAR-CLIP	27292025
MIRT483235	hsa-miR-5193	PAR-CLIP	27292025
MIRT483235	hsa-miR-5193	PAR-CLIP	27292025
MIRT483233	hsa-miR-627-3p	PAR-CLIP	27292025
MIRT483233	hsa-miR-627-3p	PAR-CLIP	27292025
MIRT483234	hsa-miR-660-3p	PAR-CLIP	27292025
MIRT483234	hsa-miR-660-3p	PAR-CLIP	27292025
MIRT483228	hsa-miR-670-3p	PAR-CLIP	27292025
MIRT483228	hsa-miR-670-3p	PAR-CLIP	27292025
MIRT483229	hsa-miR-6749-3p	PAR-CLIP	27292025
MIRT483229	hsa-miR-6749-3p	PAR-CLIP	27292025
MIRT483230	hsa-miR-6792-3p	PAR-CLIP	27292025
MIRT483230	hsa-miR-6792-3p	PAR-CLIP	27292025
MIRT483235	hsa-miR-5193	PAR-CLIP	22012620
MIRT483234	hsa-miR-660-3p	PAR-CLIP	22012620
MIRT483233	hsa-miR-627-3p	PAR-CLIP	22012620
MIRT483232	hsa-miR-202-5p	PAR-CLIP	22012620
MIRT483231	hsa-miR-4691-5p	PAR-CLIP	22012620
MIRT483230	hsa-miR-6792-3p	PAR-CLIP	22012620
MIRT483229	hsa-miR-6749-3p	PAR-CLIP	22012620
MIRT483228	hsa-miR-670-3p	PAR-CLIP	22012620
MIRT483227	hsa-miR-1238-3p	PAR-CLIP	22012620
MIRT483235	hsa-miR-5193	PAR-CLIP	23592263
MIRT483234	hsa-miR-660-3p	PAR-CLIP	23592263
MIRT483233	hsa-miR-627-3p	PAR-CLIP	23592263
MIRT483232	hsa-miR-202-5p	PAR-CLIP	23592263
MIRT483231	hsa-miR-4691-5p	PAR-CLIP	23592263
MIRT483230	hsa-miR-6792-3p	PAR-CLIP	23592263
MIRT483229	hsa-miR-6749-3p	PAR-CLIP	23592263
MIRT483228	hsa-miR-670-3p	PAR-CLIP	23592263
MIRT483227	hsa-miR-1238-3p	PAR-CLIP	23592263
MIRT980787	hsa-miR-1257	CLIP-seq
MIRT980788	hsa-miR-3123	CLIP-seq
MIRT980789	hsa-miR-106a	CLIP-seq
MIRT980790	hsa-miR-106b	CLIP-seq
MIRT980791	hsa-miR-1237	CLIP-seq
MIRT980792	hsa-miR-1248	CLIP-seq
MIRT980793	hsa-miR-17	CLIP-seq
MIRT980794	hsa-miR-20a	CLIP-seq
MIRT980795	hsa-miR-20b	CLIP-seq
MIRT980796	hsa-miR-2115	CLIP-seq
MIRT980797	hsa-miR-302a	CLIP-seq
MIRT980798	hsa-miR-302b	CLIP-seq
MIRT980799	hsa-miR-302c	CLIP-seq
MIRT980800	hsa-miR-302d	CLIP-seq
MIRT980801	hsa-miR-302e	CLIP-seq
MIRT980802	hsa-miR-3609	CLIP-seq
MIRT980803	hsa-miR-3662	CLIP-seq
MIRT980804	hsa-miR-372	CLIP-seq
MIRT980805	hsa-miR-373	CLIP-seq
MIRT980806	hsa-miR-410	CLIP-seq
MIRT980807	hsa-miR-421	CLIP-seq
MIRT980808	hsa-miR-4275	CLIP-seq
MIRT980809	hsa-miR-4289	CLIP-seq
MIRT980810	hsa-miR-4659a-3p	CLIP-seq
MIRT980811	hsa-miR-4659b-3p	CLIP-seq
MIRT980812	hsa-miR-4670-3p	CLIP-seq
MIRT980813	hsa-miR-4789-5p	CLIP-seq
MIRT980814	hsa-miR-4796-3p	CLIP-seq
MIRT980815	hsa-miR-487a	CLIP-seq
MIRT980816	hsa-miR-516a-3p	CLIP-seq
MIRT980817	hsa-miR-519d	CLIP-seq
MIRT980818	hsa-miR-520a-3p	CLIP-seq
MIRT980819	hsa-miR-520b	CLIP-seq
MIRT980820	hsa-miR-520c-3p	CLIP-seq
MIRT980821	hsa-miR-520d-3p	CLIP-seq
MIRT980822	hsa-miR-520e	CLIP-seq
MIRT980823	hsa-miR-520f	CLIP-seq
MIRT980824	hsa-miR-548ah	CLIP-seq
MIRT980825	hsa-miR-592	CLIP-seq
MIRT980826	hsa-miR-597	CLIP-seq
MIRT980827	hsa-miR-599	CLIP-seq
MIRT980828	hsa-miR-617	CLIP-seq
MIRT980829	hsa-miR-93	CLIP-seq
MIRT1548507	hsa-miR-2052	CLIP-seq
MIRT1548508	hsa-miR-3153	CLIP-seq
MIRT1548509	hsa-miR-4307	CLIP-seq
MIRT1548510	hsa-miR-4668-5p	CLIP-seq
MIRT1990537	hsa-miR-1238	CLIP-seq
MIRT2224759	hsa-miR-1197	CLIP-seq
MIRT2224760	hsa-miR-2909	CLIP-seq
MIRT980802	hsa-miR-3609	CLIP-seq
MIRT2224761	hsa-miR-3622b-5p	CLIP-seq
MIRT2224762	hsa-miR-4642	CLIP-seq
MIRT2224763	hsa-miR-4680-3p	CLIP-seq
MIRT2224764	hsa-miR-4802-5p	CLIP-seq
MIRT980824	hsa-miR-548ah	CLIP-seq
MIRT2224765	hsa-miR-624	CLIP-seq
MIRT2224766	hsa-miR-765	CLIP-seq
MIRT2680533	hsa-miR-1263	CLIP-seq
MIRT2680534	hsa-miR-192	CLIP-seq
MIRT2680535	hsa-miR-196a	CLIP-seq
MIRT2680536	hsa-miR-196b	CLIP-seq
MIRT2680537	hsa-miR-215	CLIP-seq
MIRT2680538	hsa-miR-302f	CLIP-seq
MIRT2680539	hsa-miR-3121-3p	CLIP-seq
MIRT2680540	hsa-miR-3160-5p	CLIP-seq
MIRT2680541	hsa-miR-323-3p	CLIP-seq
MIRT2680542	hsa-miR-34c-3p	CLIP-seq
MIRT2680543	hsa-miR-3613-3p	CLIP-seq
MIRT2680544	hsa-miR-3646	CLIP-seq
MIRT2680545	hsa-miR-3647-3p	CLIP-seq
MIRT980803	hsa-miR-3662	CLIP-seq
MIRT2680546	hsa-miR-3667-3p	CLIP-seq
MIRT2680547	hsa-miR-3671	CLIP-seq
MIRT2680548	hsa-miR-3682-5p	CLIP-seq
MIRT2680549	hsa-miR-3685	CLIP-seq
MIRT2680550	hsa-miR-371b-5p	CLIP-seq
MIRT2680551	hsa-miR-409-3p	CLIP-seq
MIRT1548509	hsa-miR-4307	CLIP-seq
MIRT2680552	hsa-miR-4668-3p	CLIP-seq
MIRT2680553	hsa-miR-4712-3p	CLIP-seq
MIRT2680554	hsa-miR-4742-3p	CLIP-seq
MIRT2680555	hsa-miR-4771	CLIP-seq
MIRT2680556	hsa-miR-499a-5p	CLIP-seq
MIRT2680557	hsa-miR-520d-5p	CLIP-seq
MIRT2680558	hsa-miR-524-5p	CLIP-seq
MIRT2680559	hsa-miR-548c-3p	CLIP-seq
MIRT2680560	hsa-miR-578	CLIP-seq
MIRT2680561	hsa-miR-607	CLIP-seq
MIRT2680562	hsa-miR-621	CLIP-seq
MIRT2224765	hsa-miR-624	CLIP-seq
MIRT2680563	hsa-miR-630	CLIP-seq
MIRT2680564	hsa-miR-885-5p	CLIP-seq
MIRT2680565	hsa-miR-888	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 31515488, 32296183

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q8NE31
• Protein name: Protein FAM13C
• Sequence:

  MFSCFCFSLQDNSFSSTTVTECDEDPVSLHEDQTDCSSLRDENNKENYPDAGALVEEHAP
  PSWEPQQQNVEATVLVDSVLRPSMGNFKSRKPKSIFKAESGRSHGESQETEHVVSSQSEC
  QVRAGTPAHESPQNNAFKCQETVRLQPRIDQRTAISPKDAFETRQDLNEEEAAQVHGVKD
  PAPASTQSVLADGTDSADPSPVHKDGQNEADSAPEDLHSVGTSRLLYHITDGDNPLLSPR
  CSIFSQSQRFNLDPESAPSPPSTQQFMMPRSSSRCSCGDGKEPQTITQLTKHIQSLKRKI
  RKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKELKLKLSEEQGSAPKGPPR
  NLLCEQPTVPRENGKPEAAGPEPSSSGEETPDAALTCLKERREQLPPQEDSKVTKQDKNL
  IKPLYDRYRIIKQILSTPSLIPTIQEEEDSDEDRPQGSQQPSLADPASHLPVGDHLTYSN
  ETEPVRALLPDEKKEVKPPALSMSNLHEATMPVLLDHLRETRADKKRLRKALREFEEQFF
  KQTGRSPQKEDRIPMADEYYEYKHIKAKLRLLEVLISKQDVAKTI

• Sequence length: 585

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
Prostate cancer	Uncertain significance	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SCOLIOSIS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Malignant neoplasm of prostate	Prostate cancer	BEFREE	28415558		★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	28415558		★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	BEFREE	28415558		★☆☆☆☆ Found in Text Mining only