Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene SNPs miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	2188
Gene name	FA complementation group F
Gene symbol	FANCF
Synonyms (NCBI Gene)	FAF
Chromosome	11
Chromosome location	11p14.3
Summary	The Fanconi anemia complementation group (FANC) currently includes FANCA, FANCB, FANCC, FANCD1 (also called BRCA2), FANCD2, FANCE, FANCF, FANCG, FANCI, FANCJ (also called BRIP1), FANCL, FANCM and FANCN (also called PALB2). The previously defined group FAN

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SNP ID	Visualize variation	Clinical significance	Consequence
rs104894222	G>A,C	Pathogenic	Stop gained, coding sequence variant, synonymous variant
rs587778340	AG>-	Pathogenic, not-provided	Coding sequence variant, frameshift variant
rs730880277	AGTTCGCTAATCCCGGAACTGGA>-	Pathogenic	Coding sequence variant, frameshift variant
rs730880278	CTCTCTTGGAGTGTCTCCTCATCGGCGTCCCGGACGCCCGGGCCGGG>-	Pathogenic	Coding sequence variant, frameshift variant
rs747622521	A>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs753272712	G>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1479457172	G>-	Likely-pathogenic	Stop gained, coding sequence variant

353

Show/Hide all (353)

miRTarBase ID	miRNA	Experiments	Reference
MIRT672169	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT672170	hsa-miR-4284	HITS-CLIP	23824327
MIRT672168	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT672167	hsa-miR-2052	HITS-CLIP	23824327
MIRT672166	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT672165	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT672164	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT672162	hsa-miR-7977	HITS-CLIP	23824327
MIRT672163	hsa-miR-548s	HITS-CLIP	23824327
MIRT672161	hsa-miR-4701-5p	HITS-CLIP	23824327
MIRT672160	hsa-miR-588	HITS-CLIP	23824327
MIRT672159	hsa-miR-4435	HITS-CLIP	23824327
MIRT672158	hsa-miR-3187-3p	HITS-CLIP	23824327
MIRT567611	hsa-miR-30e-5p	PAR-CLIP	20371350
MIRT567610	hsa-miR-30d-5p	PAR-CLIP	20371350
MIRT567609	hsa-miR-30b-5p	PAR-CLIP	20371350
MIRT567608	hsa-miR-30a-5p	PAR-CLIP	20371350
MIRT567607	hsa-miR-30c-5p	PAR-CLIP	20371350
MIRT567606	hsa-miR-3910	PAR-CLIP	20371350
MIRT567605	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT567604	hsa-miR-5002-5p	PAR-CLIP	20371350
MIRT567603	hsa-miR-1250-3p	PAR-CLIP	20371350
MIRT567602	hsa-miR-153-5p	PAR-CLIP	20371350
MIRT567601	hsa-miR-605-3p	PAR-CLIP	20371350
MIRT567600	hsa-miR-589-5p	PAR-CLIP	20371350
MIRT567599	hsa-miR-146a-5p	PAR-CLIP	20371350
MIRT567598	hsa-miR-146b-5p	PAR-CLIP	20371350
MIRT567597	hsa-miR-7153-5p	PAR-CLIP	20371350
MIRT567596	hsa-miR-4792	PAR-CLIP	20371350
MIRT567595	hsa-miR-4710	PAR-CLIP	20371350
MIRT567594	hsa-miR-5696	PAR-CLIP	20371350
MIRT567593	hsa-miR-579-3p	PAR-CLIP	20371350
MIRT567592	hsa-miR-664b-3p	PAR-CLIP	20371350
MIRT567591	hsa-miR-7855-5p	PAR-CLIP	20371350
MIRT567590	hsa-miR-2054	PAR-CLIP	20371350
MIRT567589	hsa-miR-335-3p	PAR-CLIP	20371350
MIRT567606	hsa-miR-3910	HITS-CLIP	28735896
MIRT567607	hsa-miR-30c-5p	ImmunofluorescenceImmunohistochemistry (IHC)Immunoprecipitaion (IP)In situ hybridizationin vitro cullelar assaysLuciferase reporter assayqRT-PCRWestern blotting	31511498
MIRT672169	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT672170	hsa-miR-4284	HITS-CLIP	23824327
MIRT672168	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT672167	hsa-miR-2052	HITS-CLIP	23824327
MIRT672166	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT672165	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT672164	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT672162	hsa-miR-7977	HITS-CLIP	23824327
MIRT672163	hsa-miR-548s	HITS-CLIP	23824327
MIRT672161	hsa-miR-4701-5p	HITS-CLIP	23824327
MIRT672160	hsa-miR-588	HITS-CLIP	23824327
MIRT672159	hsa-miR-4435	HITS-CLIP	23824327
MIRT672158	hsa-miR-3187-3p	HITS-CLIP	23824327
MIRT567611	hsa-miR-30e-5p	PAR-CLIP	20371350
MIRT567610	hsa-miR-30d-5p	PAR-CLIP	20371350
MIRT567609	hsa-miR-30b-5p	PAR-CLIP	20371350
MIRT567608	hsa-miR-30a-5p	PAR-CLIP	20371350
MIRT567607	hsa-miR-30c-5p	PAR-CLIP	20371350
MIRT567606	hsa-miR-3910	PAR-CLIP	20371350
MIRT567605	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT567604	hsa-miR-5002-5p	PAR-CLIP	20371350
MIRT567603	hsa-miR-1250-3p	PAR-CLIP	20371350
MIRT567602	hsa-miR-153-5p	PAR-CLIP	20371350
MIRT567601	hsa-miR-605-3p	PAR-CLIP	20371350
MIRT567600	hsa-miR-589-5p	PAR-CLIP	20371350
MIRT567599	hsa-miR-146a-5p	PAR-CLIP	20371350
MIRT567598	hsa-miR-146b-5p	PAR-CLIP	20371350
MIRT567597	hsa-miR-7153-5p	PAR-CLIP	20371350
MIRT567596	hsa-miR-4792	PAR-CLIP	20371350
MIRT567595	hsa-miR-4710	PAR-CLIP	20371350
MIRT567594	hsa-miR-5696	PAR-CLIP	20371350
MIRT567593	hsa-miR-579-3p	PAR-CLIP	20371350
MIRT567592	hsa-miR-664b-3p	PAR-CLIP	20371350
MIRT567591	hsa-miR-7855-5p	PAR-CLIP	20371350
MIRT567590	hsa-miR-2054	PAR-CLIP	20371350
MIRT567589	hsa-miR-335-3p	PAR-CLIP	20371350
MIRT989088	hsa-miR-1231	CLIP-seq
MIRT989089	hsa-miR-1243	CLIP-seq
MIRT989090	hsa-miR-125a-3p	CLIP-seq
MIRT989091	hsa-miR-1305	CLIP-seq
MIRT989092	hsa-miR-140-3p	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989094	hsa-miR-210	CLIP-seq
MIRT989095	hsa-miR-218	CLIP-seq
MIRT989096	hsa-miR-219-2-3p	CLIP-seq
MIRT989097	hsa-miR-24	CLIP-seq
MIRT989098	hsa-miR-2861	CLIP-seq
MIRT989099	hsa-miR-298	CLIP-seq
MIRT989100	hsa-miR-299-3p	CLIP-seq
MIRT989101	hsa-miR-30a	CLIP-seq
MIRT989102	hsa-miR-30b	CLIP-seq
MIRT989103	hsa-miR-30c	CLIP-seq
MIRT989104	hsa-miR-30d	CLIP-seq
MIRT989105	hsa-miR-30e	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989107	hsa-miR-3140-3p	CLIP-seq
MIRT989108	hsa-miR-3148	CLIP-seq
MIRT989109	hsa-miR-320a	CLIP-seq
MIRT989110	hsa-miR-320b	CLIP-seq
MIRT989111	hsa-miR-320c	CLIP-seq
MIRT989112	hsa-miR-320d	CLIP-seq
MIRT989113	hsa-miR-331-3p	CLIP-seq
MIRT989114	hsa-miR-337-5p	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT989116	hsa-miR-33a	CLIP-seq
MIRT989117	hsa-miR-33b	CLIP-seq
MIRT989118	hsa-miR-3613-5p	CLIP-seq
MIRT989119	hsa-miR-3654	CLIP-seq
MIRT989120	hsa-miR-3660	CLIP-seq
MIRT989121	hsa-miR-3672	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989124	hsa-miR-3692	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT989126	hsa-miR-3934	CLIP-seq
MIRT989127	hsa-miR-3940-5p	CLIP-seq
MIRT989128	hsa-miR-3974	CLIP-seq
MIRT989129	hsa-miR-421	CLIP-seq
MIRT989130	hsa-miR-4288	CLIP-seq
MIRT989131	hsa-miR-4292	CLIP-seq
MIRT989132	hsa-miR-4318	CLIP-seq
MIRT989133	hsa-miR-4429	CLIP-seq
MIRT989134	hsa-miR-4436b-3p	CLIP-seq
MIRT989135	hsa-miR-4457	CLIP-seq
MIRT989136	hsa-miR-4459	CLIP-seq
MIRT989137	hsa-miR-4475	CLIP-seq
MIRT989138	hsa-miR-4477a	CLIP-seq
MIRT989139	hsa-miR-4485	CLIP-seq
MIRT989140	hsa-miR-4491	CLIP-seq
MIRT989141	hsa-miR-4507	CLIP-seq
MIRT989142	hsa-miR-452	CLIP-seq
MIRT989143	hsa-miR-4526	CLIP-seq
MIRT989144	hsa-miR-4643	CLIP-seq
MIRT989145	hsa-miR-4657	CLIP-seq
MIRT989146	hsa-miR-466	CLIP-seq
MIRT989147	hsa-miR-4668-5p	CLIP-seq
MIRT989148	hsa-miR-4676-3p	CLIP-seq
MIRT989149	hsa-miR-4691-3p	CLIP-seq
MIRT989150	hsa-miR-4693-5p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT989153	hsa-miR-4789-3p	CLIP-seq
MIRT989154	hsa-miR-4793-3p	CLIP-seq
MIRT989155	hsa-miR-4799-5p	CLIP-seq
MIRT989156	hsa-miR-511	CLIP-seq
MIRT989157	hsa-miR-513b	CLIP-seq
MIRT989158	hsa-miR-520d-5p	CLIP-seq
MIRT989159	hsa-miR-524-5p	CLIP-seq
MIRT989160	hsa-miR-539	CLIP-seq
MIRT989161	hsa-miR-543	CLIP-seq
MIRT989162	hsa-miR-548aa	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT989164	hsa-miR-548t	CLIP-seq
MIRT989165	hsa-miR-553	CLIP-seq
MIRT989166	hsa-miR-579	CLIP-seq
MIRT989167	hsa-miR-600	CLIP-seq
MIRT989168	hsa-miR-624	CLIP-seq
MIRT989169	hsa-miR-632	CLIP-seq
MIRT989170	hsa-miR-633	CLIP-seq
MIRT989171	hsa-miR-636	CLIP-seq
MIRT989172	hsa-miR-663b	CLIP-seq
MIRT989173	hsa-miR-668	CLIP-seq
MIRT989174	hsa-miR-764	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT989176	hsa-miR-892a	CLIP-seq
MIRT1993092	hsa-miR-1200	CLIP-seq
MIRT1993093	hsa-miR-1245	CLIP-seq
MIRT1993094	hsa-miR-1283	CLIP-seq
MIRT1993095	hsa-miR-1297	CLIP-seq
MIRT1993096	hsa-miR-146a	CLIP-seq
MIRT1993097	hsa-miR-26a	CLIP-seq
MIRT1993098	hsa-miR-26b	CLIP-seq
MIRT989101	hsa-miR-30a	CLIP-seq
MIRT989102	hsa-miR-30b	CLIP-seq
MIRT989103	hsa-miR-30c	CLIP-seq
MIRT989104	hsa-miR-30d	CLIP-seq
MIRT989105	hsa-miR-30e	CLIP-seq
MIRT1993099	hsa-miR-3117-5p	CLIP-seq
MIRT989107	hsa-miR-3140-3p	CLIP-seq
MIRT989109	hsa-miR-320a	CLIP-seq
MIRT989110	hsa-miR-320b	CLIP-seq
MIRT989111	hsa-miR-320c	CLIP-seq
MIRT989112	hsa-miR-320d	CLIP-seq
MIRT989124	hsa-miR-3692	CLIP-seq
MIRT1993100	hsa-miR-380	CLIP-seq
MIRT1993101	hsa-miR-4272	CLIP-seq
MIRT1993102	hsa-miR-4426	CLIP-seq
MIRT989133	hsa-miR-4429	CLIP-seq
MIRT989134	hsa-miR-4436b-3p	CLIP-seq
MIRT1993103	hsa-miR-4465	CLIP-seq
MIRT989144	hsa-miR-4643	CLIP-seq
MIRT1993104	hsa-miR-4647	CLIP-seq
MIRT989146	hsa-miR-466	CLIP-seq
MIRT1993105	hsa-miR-4662b	CLIP-seq
MIRT989149	hsa-miR-4691-3p	CLIP-seq
MIRT989153	hsa-miR-4789-3p	CLIP-seq
MIRT989155	hsa-miR-4799-5p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT989165	hsa-miR-553	CLIP-seq
MIRT989166	hsa-miR-579	CLIP-seq
MIRT1993107	hsa-miR-589	CLIP-seq
MIRT1993108	hsa-miR-648	CLIP-seq
MIRT989173	hsa-miR-668	CLIP-seq
MIRT1993109	hsa-miR-889	CLIP-seq
MIRT2227006	hsa-miR-1202	CLIP-seq
MIRT2227007	hsa-miR-1228	CLIP-seq
MIRT989090	hsa-miR-125a-3p	CLIP-seq
MIRT2227008	hsa-miR-1262	CLIP-seq
MIRT1993095	hsa-miR-1297	CLIP-seq
MIRT989091	hsa-miR-1305	CLIP-seq
MIRT1993096	hsa-miR-146a	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989097	hsa-miR-24	CLIP-seq
MIRT1993097	hsa-miR-26a	CLIP-seq
MIRT1993098	hsa-miR-26b	CLIP-seq
MIRT989101	hsa-miR-30a	CLIP-seq
MIRT989102	hsa-miR-30b	CLIP-seq
MIRT989103	hsa-miR-30c	CLIP-seq
MIRT989104	hsa-miR-30d	CLIP-seq
MIRT989105	hsa-miR-30e	CLIP-seq
MIRT1993099	hsa-miR-3117-5p	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989108	hsa-miR-3148	CLIP-seq
MIRT2227009	hsa-miR-3194-5p	CLIP-seq
MIRT989109	hsa-miR-320a	CLIP-seq
MIRT989110	hsa-miR-320b	CLIP-seq
MIRT989111	hsa-miR-320c	CLIP-seq
MIRT989112	hsa-miR-320d	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT989121	hsa-miR-3672	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2227011	hsa-miR-3925-3p	CLIP-seq
MIRT2227012	hsa-miR-3929	CLIP-seq
MIRT989126	hsa-miR-3934	CLIP-seq
MIRT2227013	hsa-miR-3972	CLIP-seq
MIRT989128	hsa-miR-3974	CLIP-seq
MIRT989129	hsa-miR-421	CLIP-seq
MIRT1993101	hsa-miR-4272	CLIP-seq
MIRT2227014	hsa-miR-4325	CLIP-seq
MIRT2227015	hsa-miR-4419b	CLIP-seq
MIRT989133	hsa-miR-4429	CLIP-seq
MIRT989135	hsa-miR-4457	CLIP-seq
MIRT1993103	hsa-miR-4465	CLIP-seq
MIRT2227016	hsa-miR-4478	CLIP-seq
MIRT989142	hsa-miR-452	CLIP-seq
MIRT2227017	hsa-miR-4668-3p	CLIP-seq
MIRT989148	hsa-miR-4676-3p	CLIP-seq
MIRT2227018	hsa-miR-4701-3p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT989154	hsa-miR-4793-3p	CLIP-seq
MIRT2227019	hsa-miR-485-5p	CLIP-seq
MIRT2227020	hsa-miR-508-5p	CLIP-seq
MIRT989157	hsa-miR-513b	CLIP-seq
MIRT2227021	hsa-miR-515-5p	CLIP-seq
MIRT989158	hsa-miR-520d-5p	CLIP-seq
MIRT989159	hsa-miR-524-5p	CLIP-seq
MIRT2227022	hsa-miR-542-3p	CLIP-seq
MIRT989161	hsa-miR-543	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT989166	hsa-miR-579	CLIP-seq
MIRT1993107	hsa-miR-589	CLIP-seq
MIRT989167	hsa-miR-600	CLIP-seq
MIRT2227023	hsa-miR-622	CLIP-seq
MIRT989168	hsa-miR-624	CLIP-seq
MIRT989173	hsa-miR-668	CLIP-seq
MIRT989174	hsa-miR-764	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT2227024	hsa-miR-890	CLIP-seq
MIRT2387890	hsa-miR-4468	CLIP-seq
MIRT2387891	hsa-miR-4519	CLIP-seq
MIRT2449465	hsa-miR-1539	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT2449466	hsa-miR-3622b-5p	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2449467	hsa-miR-4253	CLIP-seq
MIRT2449468	hsa-miR-4684-5p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT2227008	hsa-miR-1262	CLIP-seq
MIRT2530818	hsa-miR-1321	CLIP-seq
MIRT2449465	hsa-miR-1539	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT2530819	hsa-miR-186	CLIP-seq
MIRT1993099	hsa-miR-3117-5p	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT2530820	hsa-miR-3126-5p	CLIP-seq
MIRT2530821	hsa-miR-3133	CLIP-seq
MIRT989108	hsa-miR-3148	CLIP-seq
MIRT2530822	hsa-miR-329	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT2449466	hsa-miR-3622b-5p	CLIP-seq
MIRT2530823	hsa-miR-362-3p	CLIP-seq
MIRT2530824	hsa-miR-3685	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989124	hsa-miR-3692	CLIP-seq
MIRT2530825	hsa-miR-371-5p	CLIP-seq
MIRT2530826	hsa-miR-371b-5p	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2227011	hsa-miR-3925-3p	CLIP-seq
MIRT2530827	hsa-miR-3941	CLIP-seq
MIRT2530828	hsa-miR-412	CLIP-seq
MIRT2449467	hsa-miR-4253	CLIP-seq
MIRT2530829	hsa-miR-4419a	CLIP-seq
MIRT989134	hsa-miR-4436b-3p	CLIP-seq
MIRT989135	hsa-miR-4457	CLIP-seq
MIRT2530830	hsa-miR-4510	CLIP-seq
MIRT989142	hsa-miR-452	CLIP-seq
MIRT989147	hsa-miR-4668-5p	CLIP-seq
MIRT989148	hsa-miR-4676-3p	CLIP-seq
MIRT2449468	hsa-miR-4684-5p	CLIP-seq
MIRT989149	hsa-miR-4691-3p	CLIP-seq
MIRT2227018	hsa-miR-4701-3p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT2530831	hsa-miR-4739	CLIP-seq
MIRT2530832	hsa-miR-4756-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT989154	hsa-miR-4793-3p	CLIP-seq
MIRT989155	hsa-miR-4799-5p	CLIP-seq
MIRT2227020	hsa-miR-508-5p	CLIP-seq
MIRT989157	hsa-miR-513b	CLIP-seq
MIRT2227022	hsa-miR-542-3p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT2530833	hsa-miR-603	CLIP-seq
MIRT2227023	hsa-miR-622	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT2449466	hsa-miR-3622b-5p	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2449467	hsa-miR-4253	CLIP-seq
MIRT2449468	hsa-miR-4684-5p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq

Show/Hide all (15)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	IDA	22343915
GO:0005515	Function	Protein binding	IPI	11063725, 12649160, 32296183, 32814053
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005829	Component	Cytosol	TAS
GO:0006281	Process	DNA repair	IEA
GO:0006974	Process	DNA damage response	IBA
GO:0006974	Process	DNA damage response	IEA
GO:0036297	Process	Interstrand cross-link repair	IEA
GO:0036297	Process	Interstrand cross-link repair	NAS	19965384
GO:0043240	Component	Fanconi anaemia nuclear complex	IBA
GO:0043240	Component	Fanconi anaemia nuclear complex	IDA	20347428
GO:0043240	Component	Fanconi anaemia nuclear complex	IEA
GO:0043240	Component	Fanconi anaemia nuclear complex	NAS	22343915

MIM	HGNC	e!Ensembl
613897	3587	ENSG00000183161

Q9NPI8

Protein name

Fanconi anemia group F protein (Protein FACF)

Protein function

DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability (By similarity).

PDB

2IQC , 7KZP , 7KZQ , 7KZR , 7KZS , 7KZT , 7KZV

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF11107	FANCF	1 → 354	Fanconi anemia group F protein (FANCF)	Family

Sequence

MESLLQHLDRFSELLAVSSTTYVSTWDPATVRRALQWARYLRHIHRRFGRHGPIRTALER
RLHNQWRQEGGFGRGPVPGLANFQALGHCDVLLSLRLLENRALGDAARYHLVQQLFPGPG
VRDADEETLQESLARLARRRSAVHMLRFNGYRENPNLQEDSLMKTQAELLLERLQEVGKA
EAERPARFLSSLWERLPQNNFLKVIAVALLQPPLSRRPQEELEPGIHKSPGEGSQVLVHW
LLGNSEVFAAFCRALPAGLLTLVTSRHPALSPVYLGLLTDWGQRLHYDLQKGIWVGTESQ
DVPWEELHNRFQSLCQAPPPLKDKVLTALETCKAQDGDFEVPGLSIWTDLLLALRSGAFR
KRQVLGLSAGLSSV

Sequence length

374

Interactions

View interactions

	KEGG		Reactome
	Fanconi anemia pathway		Fanconi Anemia Pathway

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Causal Diseases (3)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
FANCF-related disorder	Pathogenic; Likely pathogenic	rs587778340, rs1858634789, rs1479457172	RCV004752688 RCV003412456 RCV004753158	★★★★★ ★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Fanconi anemia	Pathogenic; Likely pathogenic	rs2133798885, rs2133797345, rs2133798927, rs2133798073, rs1046564488, rs747622521, rs2494871663, rs2494869728, rs2494866075, rs730880277, rs587778340, rs2494871401, rs2133797511, rs2494867744, rs2494870839 View all (9 more)	RCV001389253 RCV001615378 RCV001970176 RCV001982108 RCV002255797 View all (20 more)	★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Fanconi anemia complementation group F	Likely pathogenic; Pathogenic	rs754014970, rs2133798885, rs778546226, rs2133797515, rs2133798188, rs747622521, rs2494866075, rs730880277, rs104894221, rs587778340, rs104894222, rs2494867744, rs2494861863, rs2494870839, rs762741561 View all (20 more)	RCV005046692 RCV003469754 RCV001520573 RCV001520576 RCV002254006 View all (30 more)	★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (6)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
FANCONI ANEMIA, COMPLEMENTATION GROUP F	—	CTD, Disgenet, HPO CTD, Disgenet, HPO CTD, Disgenet, HPO	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Hereditary cancer	Conflicting classifications of pathogenicity	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Hereditary cancer-predisposing syndrome	Benign; Likely benign; Uncertain significance	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Malignant tumor of breast	Benign; Likely benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Ovarian cancer	Benign; Likely benign; Conflicting classifications of pathogenicity	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PARKINSON DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (113)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Acute monocytic leukemia	Monocytic Leukemia	GENOMICS_ENGLAND_DG	28297620		★★★★★ ★☆☆☆☆ Found in Text Mining only
Anemia Hemolytic	Hemolytic anemia	Pubtator	11167740, 14617007, 16803569	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Anus, Imperforate	Imperforate anus	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Astigmatism	Astigmatism	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Atrial Fibrillation	Atrial Fibrillation	BEFREE	12821245		★★★★★ ★☆☆☆☆ Found in Text Mining only
Atrial Septal Defects	Atrial Septal Defect	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Azoospermia	Azoospermia	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Bladder Neoplasm	Bladder Neoplasm	BEFREE	18000367		★★★★★ ★☆☆☆☆ Found in Text Mining only
Blepharoptosis	Ptosis	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Bloom Syndrome	Bloom Syndrome	BEFREE	20064461		★★★★★ ★☆☆☆☆ Found in Text Mining only
Breast Carcinoma	Breast Carcinoma	BEFREE	19813073, 28513990, 31511498		★★★★★ ★☆☆☆☆ Found in Text Mining only
Breast Diseases	Breast disease	Pubtator	23440494	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Breast Neoplasms	Breast neoplasm	Pubtator	17932744, 22952942, 23440494, 24345874	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Byzanthine arch palate	High palate	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Cafe au lait spots, multiple	Cafe-au-lait spot	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinogenesis	Carcinogenesis	Pubtator	14617007	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma	Carcinoma	BEFREE	18000367, 19602291, 26438152		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma of bladder	Bladder carcinoma	BEFREE	18000367		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Squamous Cell	Squamous cell carcinoma	Pubtator	29617660	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma, Ovarian Epithelial	Ovarian Epithelial carcinoma	BEFREE	12781358, 16418574, 18414472, 19813073, 23440494, 26507869		★★★★★ ★☆☆☆☆ Found in Text Mining only
Cardiomyopathies	Cardiomyopathy	BEFREE	12821245		★★★★★ ★☆☆☆☆ Found in Text Mining only
Cataract	Cataract	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
cervical cancer	Cervical Cancer	BEFREE	15126331		★★★★★ ★☆☆☆☆ Found in Text Mining only
Cervix carcinoma	Cervix carcinoma	BEFREE	15126331		★★★★★ ★☆☆☆☆ Found in Text Mining only
Choanal Atresia	Choanal Atresia	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Clinodactyly of the 5th finger	Camptodactyly of fingers	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	32915143	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Congenital arteriovenous malformation	Congenital Arteriovenous Malformation	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Congenital Epicanthus	Congenital Epicanthus	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Congenital exomphalos	Congenital Exomphalos	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Cranial nerve palsies	Cranial Nerve Paralysis	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Cryptorchidism	Cryptorchidism	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Dwarfism	Dwarfism	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Epiretinal Membrane	Epiretinal Membrane	BEFREE	28405744		★★★★★ ★☆☆☆☆ Found in Text Mining only
Epithelial ovarian cancer	Ovarian cancer	BEFREE	26507869		★★★★★ ★☆☆☆☆ Found in Text Mining only
Exophthalmos	Proptosis	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Fanconi Anemia	Fanconi Anemia	GENOMICS_ENGLAND_DG	10615118, 19686080		★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Fanconi Anemia	Fanconi anemia	Pubtator	11001585, 11750104, 12239156, 15256425, 16127171, 17082180, 19405097, 29973652, 31288759, 9382107	Associate	★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Fanconi Anemia	Fanconi Anemia	BEFREE	11157805, 11750104, 12001267, 12781358, 14617007, 15126331, 16127171, 16418574, 16466850, 16803569, 18000367, 18607065, 19813073, 20064461, 22537224 View all (6 more)		★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Fanconi Anemia	Fanconi Anemia	CLINVAR_DG	15262960		★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Fanconi anemia	Fanconi Anemia	Orphanet			★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Fanconi Anemia	Fanconi anemia	Pubtator	23440494	Stimulate	★★★★★ ★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
FANCONI ANEMIA, COMPLEMENTATION GROUP A (disorder)	Anemia	BEFREE	11750104, 12781358, 15126331, 16127171, 16418574, 16466850, 18000367, 19813073, 20064461, 22537224, 23440494, 25647473, 26033879, 27714961, 28687971, 31288759 View all (1 more)		★★★★★ ★☆☆☆☆ Found in Text Mining only
FANCONI ANEMIA, COMPLEMENTATION GROUP F	Fanconi Anemia	CLINVAR_DG	10615118, 16084127, 26033879		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
FANCONI ANEMIA, COMPLEMENTATION GROUP F	Fanconi Anemia	GENOMICS_ENGLAND_DG	10615118, 19686080, 9382107		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
FANCONI ANEMIA, COMPLEMENTATION GROUP F	Fanconi Anemia	BEFREE	22952942, 26507869		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
FANCONI ANEMIA, COMPLEMENTATION GROUP F	Fanconi Anemia	CTD_human_DG			★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Frontal bossing	Frontal bossing	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Glaucoma	Glaucoma	BEFREE	8088963		★★★★★ ★☆☆☆☆ Found in Text Mining only
Global developmental delay	Developmental Delay	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Growth Disorders	Growth disorder	Pubtator	31288759	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Hematologic Diseases	Hematologic disease	Pubtator	31288759	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Hereditary pancreatitis	Pancreatitis	Pubtator	28687971	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Hirschsprung Disease	Hirschsprung Disease	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Hydrocephalus	Hydrocephalus	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Hypertrophic Cardiomyopathy	Hypertrophic cardiomyopathy	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Hypogonadism	Hypogonadism	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Hypospadias	Hypospadias	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Intellectual Disability	Mental retardation	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
leukemia	Leukemia	BEFREE	25647473		★★★★★ ★☆☆☆☆ Found in Text Mining only
leukemia	Leukemia	GENOMICS_ENGLAND_DG	28297620		★★★★★ ★☆☆☆☆ Found in Text Mining only
leukemia	Leukemia	CGI_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukemia, Myelocytic, Acute	Leukemia	BEFREE	14617007		★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukemia, Myelocytic, Acute	Leukemia	GENOMICS_ENGLAND_DG	28297620		★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukemia, Myelocytic, Acute	Leukemia	CGI_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukopenia	Leukopenia	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Long narrow head	Dolichocephaly	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Lung Neoplasms	Lung neoplasms	Pubtator	26385482, 26438152	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Head and Neck Neoplasm	Head and neck cancer	GENOMICS_ENGLAND_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of breast	Breast Cancer	BEFREE	17932744, 19813073, 28513990, 31511498		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of ovary	Ovarian cancer	BEFREE	12781358, 15107617, 16418574, 18414472, 19813073, 23440494		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of urinary bladder	Urinary bladder cancer	BEFREE	18000367		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	16803569		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant tumor of cervix	Cervical Tumor	BEFREE	15126331		★★★★★ ★☆☆☆☆ Found in Text Mining only
Mammary Neoplasms	Mammary Neoplasms	BEFREE	17932744		★★★★★ ★☆☆☆☆ Found in Text Mining only
Mammary Neoplasms	Mammary Neoplasms	LHGDN	17932744		★★★★★ ★☆☆☆☆ Found in Text Mining only
Meckel Diverticulum	Meckel Diverticulum	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Meretoja syndrome	Meretoja Syndrome	BEFREE	10729296, 8088963		★★★★★ ★☆☆☆☆ Found in Text Mining only
Mesothelioma Malignant	Mesothelioma	Pubtator	28687356	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Microcephaly	Microcephaly	Pubtator	31288759	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Microcephaly	Microcephaly	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Micrognathism	Micrognathism	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Microphthalmos	Microphthalmos	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Miller Dieker syndrome	Miller Dieker Syndrome	GENOMICS_ENGLAND_DG	28297620		★★★★★ ★☆☆☆☆ Found in Text Mining only
Myelodysplasia	Myelodysplasia	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
MYELODYSPLASTIC SYNDROME	Myelodysplastic Syndrome	GENOMICS_ENGLAND_DG	28297620		★★★★★ ★☆☆☆☆ Found in Text Mining only
MYELODYSPLASTIC SYNDROME	Myelodysplastic Syndrome	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Nijmegen Breakage Syndrome	Nijmegen Breakage Syndrome	BEFREE	16803569		★★★★★ ★☆☆☆☆ Found in Text Mining only
Nystagmus	Nystagmus	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
ovarian neoplasm	Ovarian neoplasm	BEFREE	12692539, 12781358, 16418574, 18414472, 19813073, 23440494		★★★★★ ★☆☆☆☆ Found in Text Mining only
ovarian neoplasm	Ovarian neoplasm	LHGDN	16418574, 18414472		★★★★★ ★☆☆☆☆ Found in Text Mining only
Ovarian Neoplasms	Ovarian neoplasm	Pubtator	18414472, 22537224, 23440494, 30822218	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Pancytopenia	Pancytopenia	GENOMICS_ENGLAND_DG	28297620		★★★★★ ★☆☆☆☆ Found in Text Mining only
Pancytopenia	Pancytopenia	Pubtator	31288759	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Patent ductus arteriosus	Patent ductus arteriosus	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Ptosis	Ptosis	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Renal Insufficiency	Renal Insufficiency	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Retinal Diseases	Retinal Diseases	BEFREE	31526798		★★★★★ ★☆☆☆☆ Found in Text Mining only
Retinal Dystrophies	Retinal Dystrophy	BEFREE	27880076		★★★★★ ★☆☆☆☆ Found in Text Mining only
Retinitis Pigmentosa	Retinitis Pigmentosa	BEFREE	27880076, 29498230		★★★★★ ★☆☆☆☆ Found in Text Mining only
Scoliosis, unspecified	Scoliosis	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Sleep Deprivation	Sleep deprivation	Pubtator	22952942	Stimulate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Spina Bifida	Spina Bifida	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Squamous cell carcinoma	Carcinoma	BEFREE	29617660		★★★★★ ★☆☆☆☆ Found in Text Mining only
Squamous cell carcinoma of the head and neck	Carcinoma Of The Head And Neck	BEFREE	16466850		★★★★★ ★☆☆☆☆ Found in Text Mining only
STARGARDT DISEASE 1 (disorder)	Stargardt disease	BEFREE	29038010		★★★★★ ★☆☆☆☆ Found in Text Mining only
Stomach Neoplasms	Stomach neoplasms	Pubtator	24748501	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Strabismus	Strabismus	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Syndactyly of fingers	Syndactyly of fingers	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Syndactyly of the toes	Syndactyly Of The Toes	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Tetralogy of Fallot	Tetralogy of Fallot	HPO_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Triple Negative Breast Neoplasms	Triple Negative Breast Neoplasms	BEFREE	19813073		★★★★★ ★☆☆☆☆ Found in Text Mining only
Uterine Cervical Neoplasm	Uterine cervix neoplasm	LHGDN	15126331		★★★★★ ★☆☆☆☆ Found in Text Mining only

FANCF (FA complementation group F)